Literature DB >> 22341709

Taking advantage of the use of supervised learning methods for characterization of sperm population structure related with freezability in the Iberian red deer.

M Ramón1, F Martínez-Pastor, O García-Álvarez, A Maroto-Morales, A Josefa Soler, P Jiménez-Rabadán, M Rocío Fernández-Santos, R Bernabéu, J Julián Garde.   

Abstract

Using Iberian red deer as a model, this study presents a supervised learning method, the Support Vector Machines (SVM), to characterize sperm population structure related with freezability. Male freezability was assessed by evaluating motility, membrane status and mitochondrial membrane potential of sperm after a freezing-thawing procedure. The SVM model was generated using sperm motility information captured by computer-assisted sperm analysis (CASA) from thawed semen, belonging to six stags with marked differences on their freezability. A total of 1369 sperm tracks were recorded for seven kinematic parameters and assigned to four motility patterns based on them: weak motile, progressive, transitional and hyperactivated-like. Then, these data were split in two sets: the training set, used to train the SVM model, and the testing set, used to examine how the SVM method and three other unsupervised methods, a non-hierarchical, a hierarchical and a multistep clustering procedures, performed the sperm classification into subpopulations. The SVM was revealed as the most accurate method in the characterization of sperm subpopulations, showing all the sperm subpopulations obtained in this way high significant correlations with those sperm parameters used to characterize freezability of males. Given its superiority, the SVM method was used to characterize the sperm motile subpopulations in Iberian red deer. Sperm motile data from frozen-thawed semen belonging to 25 stags were recorded and loaded into the SVM model. The sperm population structure revealed that those males showing poor freezability were characterized by high percentages of sperm with a weak motility pattern. In opposite, males showing good freezability were characterized by higher percentages of sperm with a progressive and hyperactivated-like motility pattern and lower percentages of sperm with a weak motile pattern. We also identified a sperm subpopulation with a transitional motility pattern. This subpopulation increased as the freezability of males improved, and may be used as indicative of overall sperm motility.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22341709     DOI: 10.1016/j.theriogenology.2011.12.011

Source DB:  PubMed          Journal:  Theriogenology        ISSN: 0093-691X            Impact factor:   2.740


  5 in total

1.  Sperm cell population dynamics in ram semen during the cryopreservation process.

Authors:  Manuel Ramón; M Dolores Pérez-Guzmán; Pilar Jiménez-Rabadán; Milagros C Esteso; Olga García-Álvarez; Alejandro Maroto-Morales; Luis Anel-López; Ana J Soler; M Rocío Fernández-Santos; J Julián Garde
Journal:  PLoS One       Date:  2013-03-27       Impact factor: 3.240

2.  The Effect of Different Extenders on the Quality Characteristics of European Red Deer Epididymal Sperm Stored at 5 °C.

Authors:  Anna Dziekońska; Nicoletta M Neuman; Klaudia K Burdal; Agnieszka Wiszniewska-Łaszczych; Marek Bogdaszewski
Journal:  Animals (Basel)       Date:  2022-10-04       Impact factor: 3.231

3.  Computer-assisted system with multiple feature fused support vector machine for sperm morphology diagnosis.

Authors:  Kuo-Kun Tseng; Yifan Li; Chih-Yu Hsu; Huang-Nan Huang; Ming Zhao; Mingyue Ding
Journal:  Biomed Res Int       Date:  2013-09-26       Impact factor: 3.411

4.  Melatonin Non-Linearly Modulates Bull Spermatozoa Motility and Physiology in Capacitating and Non-Capacitating Conditions.

Authors:  Estela Fernández-Alegre; Indira Álvarez-Fernández; Juan Carlos Domínguez; Adriana Casao; Felipe Martínez-Pastor
Journal:  Int J Mol Sci       Date:  2020-04-13       Impact factor: 5.923

5.  Cold-Shock Test Is a Practical Method for Selecting Boar Ejaculates Yielding Appropriate Seminal Plasma for Post-Thawing Supplementation.

Authors:  Estíbaliz Lacalle; Andrea Núñez; Estela Fernández-Alegre; Itxaso Crespo-Félez; Juan Carlos Domínguez; Marta Elena Alonso; Raúl González-Urdiales; Felipe Martínez-Pastor
Journal:  Animals (Basel)       Date:  2021-03-18       Impact factor: 2.752

  5 in total

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