Literature DB >> 22330587

GMC: a GPU implementation of a Monte Carlo dose calculation based on Geant4.

Lennart Jahnke1, Jens Fleckenstein, Frederik Wenz, Jürgen Hesser.   

Abstract

We present a GPU implementation called GMC (GPU Monte Carlo) of the low energy (<100 GeV) electromagnetic part of the Geant4 Monte Carlo code using the NVIDIA® CUDA programming interface. The classes for electron and photon interactions as well as a new parallel particle transport engine were implemented. The way a particle is processed is not in a history by history manner but rather by an interaction by interaction method. Every history is divided into steps that are then calculated in parallel by different kernels. The geometry package is currently limited to voxelized geometries. A modified parallel Mersenne twister was used to generate random numbers and a random number repetition method on the GPU was introduced. All phantom results showed a very good agreement between GPU and CPU simulation with gamma indices of >97.5% for a 2%/2 mm gamma criteria. The mean acceleration on one GTX 580 for all cases compared to Geant4 on one CPU core was 4860. The mean number of histories per millisecond on the GPU for all cases was 658 leading to a total simulation time for one intensity-modulated radiation therapy dose distribution of 349 s. In conclusion, Geant4-based Monte Carlo dose calculations were significantly accelerated on the GPU.

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Year:  2012        PMID: 22330587     DOI: 10.1088/0031-9155/57/5/1217

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  11 in total

1.  Initial development of goCMC: a GPU-oriented fast cross-platform Monte Carlo engine for carbon ion therapy.

Authors:  Nan Qin; Marco Pinto; Zhen Tian; Georgios Dedes; Arnold Pompos; Steve B Jiang; Katia Parodi; Xun Jia
Journal:  Phys Med Biol       Date:  2017-01-31       Impact factor: 3.609

2.  Experimental depth dose curves of a 67.5 MeV proton beam for benchmarking and validation of Monte Carlo simulation.

Authors:  Bruce A Faddegon; Jungwook Shin; Carlos M Castenada; José Ramos-Méndez; Inder K Daftari
Journal:  Med Phys       Date:  2015-07       Impact factor: 4.071

3.  A GPU-accelerated Monte Carlo dose calculation platform and its application toward validating an MRI-guided radiation therapy beam model.

Authors:  Yuhe Wang; Thomas R Mazur; Olga Green; Yanle Hu; Hua Li; Vivian Rodriguez; H Omar Wooten; Deshan Yang; Tianyu Zhao; Sasa Mutic; H Harold Li
Journal:  Med Phys       Date:  2016-07       Impact factor: 4.071

4.  ARCHERRT - a GPU-based and photon-electron coupled Monte Carlo dose computing engine for radiation therapy: software development and application to helical tomotherapy.

Authors:  Lin Su; Youming Yang; Bryan Bednarz; Edmond Sterpin; Xining Du; Tianyu Liu; Wei Ji; X George Xu
Journal:  Med Phys       Date:  2014-07       Impact factor: 4.071

Review 5.  GPU-based high-performance computing for radiation therapy.

Authors:  Xun Jia; Peter Ziegenhein; Steve B Jiang
Journal:  Phys Med Biol       Date:  2014-02-03       Impact factor: 3.609

6.  GPU-based fast Monte Carlo dose calculation for proton therapy.

Authors:  Xun Jia; Jan Schümann; Harald Paganetti; Steve B Jiang
Journal:  Phys Med Biol       Date:  2012-11-06       Impact factor: 3.609

7.  GPU-accelerated Monte Carlo simulation of MV-CBCT.

Authors:  Mengying Shi; Marios Myronakis; Matthew Jacobson; Dianne Ferguson; Christopher Williams; Mathias Lehmann; Paul Baturin; Pascal Huber; Rony Fueglistaller; Ingrid Valencia Lozano; Thomas Harris; Daniel Morf; Ross I Berbeco
Journal:  Phys Med Biol       Date:  2020-12-02       Impact factor: 4.174

8.  Fast Monte Carlo simulation for total body irradiation using a (60)Co teletherapy unit.

Authors:  Xiaodong Liu; Danielle Lack; Joseph T Rakowski; Cory Knill; Michael Snyder
Journal:  J Appl Clin Med Phys       Date:  2013-05-06       Impact factor: 2.102

9.  Moving GPU-OpenCL-based Monte Carlo dose calculation toward clinical use: Automatic beam commissioning and source sampling for treatment plan dose calculation.

Authors:  Zhen Tian; Yongbao Li; Nima Hassan-Rezaeian; Steve B Jiang; Xun Jia
Journal:  J Appl Clin Med Phys       Date:  2017-02-16       Impact factor: 2.102

10.  Review of in vivo optical molecular imaging and sensing from x-ray excitation.

Authors:  Brian W Pogue; Rongxiao Zhang; Xu Cao; Jeremy Mengyu Jia; Arthur Petusseau; Petr Bruza; Sergei A Vinogradov
Journal:  J Biomed Opt       Date:  2021-01       Impact factor: 3.170

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