Literature DB >> 22328743

Draft genome sequence of Paenibacillus peoriae strain KCTC 3763T.

Haeyoung Jeong1, Soo-Keun Choi, Soo-Young Park, Sun Hong Kim, Seung-Hwan Park.   

Abstract

Paenibacillus peoriae is a potentially plant-beneficial soil bacterium and is a close relative to Paenibacillus polymyxa, the type species of the genus Paenibacillus. Herein, we present the 5.77-Mb draft genome sequence of the P. peoriae type strain with the aim of providing insight into the genomic basis of plant growth-promoting Paenibacillus species.

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Year:  2012        PMID： 22328743      PMCID： PMC3294820          DOI： 10.1128/JB.06577-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

2.  A polyphasic reassessment of the genus Paenibacillus, reclassification of Bacillus lautus (Nakamura 1984) as Paenibacillus lautus comb. nov. and of Bacillus peoriae (Montefusco et al. 1993) as Paenibacillus peoriae comb. nov., and emended descriptions of P. lautus and of P. peoriae.

Authors:  M Heyndrickx; K Vandemeulebroecke; P Scheldeman; K Kersters; P de Vos; N A Logan; A M Aziz; N Ali; R C Berkeley
Journal:  Int J Syst Bacteriol       Date:  1996-10

3.  Genome sequence of the polymyxin-producing plant-probiotic rhizobacterium Paenibacillus polymyxa E681.

Authors:  Jihyun F Kim; Haeyoung Jeong; Soo-Young Park; Seong-Bin Kim; Yon Kyoung Park; Soo-Keun Choi; Choong-Min Ryu; Cheol-Goo Hur; Sa-Youl Ghim; Tae Kwang Oh; Jae Jong Kim; Chang Seuk Park; Seung-Hwan Park
Journal:  J Bacteriol       Date:  2010-09-17       Impact factor: 3.490

4.  Influence of growth conditions on the production of extracellular proteolytic enzymes in Paenibacillus peoriae NRRL BD-62 and Paenibacillus polymyxa SCE2.

Authors:  V M Alvarez; I von der Weid; L Seldin; A L S Santos
Journal:  Lett Appl Microbiol       Date:  2006-12       Impact factor: 2.858

5.  Antimicrobial activity of Paenibacillus peoriae strain NRRL BD-62 against a broad spectrum of phytopathogenic bacteria and fungi.

Authors:  I von der Weid; D S Alviano; A L S Santos; R M A Soares; C S Alviano; L Seldin
Journal:  J Appl Microbiol       Date:  2003       Impact factor: 3.772

6.  Shifting the genomic gold standard for the prokaryotic species definition.

Authors:  Michael Richter; Ramon Rosselló-Móra
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-23       Impact factor: 11.205

7.  Versatile and open software for comparing large genomes.

Authors:  Stefan Kurtz; Adam Phillippy; Arthur L Delcher; Michael Smoot; Martin Shumway; Corina Antonescu; Steven L Salzberg
Journal:  Genome Biol       Date:  2004-01-30       Impact factor: 13.583

8.  Ecology and biotechnological potential of Paenibacillus polymyxa: a minireview.

Authors:  Sadhana Lal; Silvia Tabacchioni
Journal:  Indian J Microbiol       Date:  2009-04-21       Impact factor: 2.461

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  10 in total
  5 in total

1.  Characterization of Novel Fusaricidins Produced by Paenibacillus polymyxa-M1 Using MALDI-TOF Mass Spectrometry.

Authors:  Joachim Vater; Ben Niu; Kristin Dietel; Rainer Borriss
Journal:  J Am Soc Mass Spectrom       Date:  2015-06-23       Impact factor: 3.109

2.  Comparative genomic analysis of N2-fixing and non-N2-fixing Paenibacillus spp.: organization, evolution and expression of the nitrogen fixation genes.

Authors:  Jian-Bo Xie; Zhenglin Du; Lanqing Bai; Changfu Tian; Yunzhi Zhang; Jiu-Yan Xie; Tianshu Wang; Xiaomeng Liu; Xi Chen; Qi Cheng; Sanfeng Chen; Jilun Li
Journal:  PLoS Genet       Date:  2014-03-20       Impact factor: 5.917

3.  Epilithic Biofilms in Lake Baikal: Screening and Diversity of PKS and NRPS Genes in the Genomes of Heterotrophic Bacteria.

Authors:  Elena Sukhanova; Ekaterina Zimens; Oksana Kaluzhnaya; Valentina Parfenova; Olga Belykh
Journal:  Pol J Microbiol       Date:  2018

4.  Comparative genomic and functional analyses of Paenibacillus peoriae ZBSF16 with biocontrol potential against grapevine diseases, provide insights into its genes related to plant growth-promoting and biocontrol mechanisms.

Authors:  Lifang Yuan; Hang Jiang; Xilong Jiang; Tinggang Li; Ping Lu; Xiangtian Yin; Yanfeng Wei
Journal:  Front Microbiol       Date:  2022-09-08       Impact factor: 6.064

5.  Genomic comparison of sporeforming bacilli isolated from milk.

Authors:  Andrea I Moreno Switt; Alexis D Andrus; Matthew L Ranieri; Renato H Orsi; Reid Ivy; Henk C den Bakker; Nicole H Martin; Martin Wiedmann; Kathryn J Boor
Journal:  BMC Genomics       Date:  2014-01-14       Impact factor: 3.969
  5 in total

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