Literature DB >> 22328580

Analysis of stress granule assembly in Schizosaccharomyces pombe.

Chun-Yu Wang1, Wei-Ling Wen, Daniel Nilsson, Per Sunnerhagen, Tien-Hsien Chang, Shao-Win Wang.   

Abstract

Stress granules (SGs) are cytoplasmic aggregates of RNA and proteins in eukaryotic cells that are rapidly induced in response to environmental stress, but are not seen in cells growing under favorable conditions. SGs have been primarily studied in mammalian cells. The existence of SGs in the fission yeast and the distantly related budding yeast was demonstrated only recently. In both species, they contain many orthologs of the proteins seen in mammalian SGs. In this study, we have characterized these proteins and determined their involvement in the assembly of fission yeast SGs, in particular, the homolog of human G3BP proteins. G3BP interacts with the deubiquitinating protease USP10 and plays an important role in the assembly of SGs. We have also identified Ubp3, an ortholog of USP10, as an interaction partner of the fission yeast G3BP-like protein Nxt3 and required for its stability. Under thermal stress, like their human orthologs, both Nxt3 and Ubp3 rapidly relocalize to cytoplasmic foci that contain the SG marker poly(A)-binding protein Pabp. However, in contrast to G3BP1 and USP10, neither deletion nor overexpression of nxt3(+) or ubp3(+) affected the assembly of fission yeast SGs as judged by the relocalization of Pabp. Similar results were observed in mutants defective in orthologs of SG components that are known to affect SG assembly in human and in budding yeast, such as ataxia-2 and TIA-like proteins. Together, our data indicate that despite similar protein compositions, the underlying molecular mechanisms for the assembly of SGs could be distinct between species.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22328580      PMCID: PMC3312557          DOI: 10.1261/rna.030270.111

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  34 in total

1.  A generic protein purification method for protein complex characterization and proteome exploration.

Authors:  G Rigaut; A Shevchenko; B Rutz; M Wilm; M Mann; B Séraphin
Journal:  Nat Biotechnol       Date:  1999-10       Impact factor: 54.908

2.  Stress granule assembly is mediated by prion-like aggregation of TIA-1.

Authors:  Natalie Gilks; Nancy Kedersha; Maranatha Ayodele; Lily Shen; Georg Stoecklin; Laura M Dember; Paul Anderson
Journal:  Mol Biol Cell       Date:  2004-09-15       Impact factor: 4.138

Review 3.  Rasputin, more promiscuous than ever: a review of G3BP.

Authors:  Katharine Irvine; Renee Stirling; David Hume; Derek Kennedy
Journal:  Int J Dev Biol       Date:  2004-12       Impact factor: 2.203

4.  A polyadenylate binding protein localized to the granules of cytolytic lymphocytes induces DNA fragmentation in target cells.

Authors:  Q Tian; M Streuli; H Saito; S F Schlossman; P Anderson
Journal:  Cell       Date:  1991-11-01       Impact factor: 41.582

5.  Inhibition of ribosome recruitment induces stress granule formation independently of eukaryotic initiation factor 2alpha phosphorylation.

Authors:  Rachid Mazroui; Rami Sukarieh; Marie-Eve Bordeleau; Randal J Kaufman; Peter Northcote; Junichi Tanaka; Imed Gallouzi; Jerry Pelletier
Journal:  Mol Biol Cell       Date:  2006-07-26       Impact factor: 4.138

6.  Variation of phenotypic suppression due to the psi+ and psi- extrachromosomal determinants in yeast.

Authors:  E Palmer; J M Wilhelm; F Sherman
Journal:  J Mol Biol       Date:  1979-02-15       Impact factor: 5.469

7.  Molecular genetic analysis of fission yeast Schizosaccharomyces pombe.

Authors:  S Moreno; A Klar; P Nurse
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

8.  Ubp3 requires a cofactor, Bre5, to specifically de-ubiquitinate the COPII protein, Sec23.

Authors:  Mickaël Cohen; Françoise Stutz; Naïma Belgareh; Rosine Haguenauer-Tsapis; Catherine Dargemont
Journal:  Nat Cell Biol       Date:  2003-07       Impact factor: 28.824

9.  Structural and functional analysis of ataxin-2 and ataxin-3.

Authors:  Mario Albrecht; Michael Golatta; Ullrich Wüllner; Thomas Lengauer
Journal:  Eur J Biochem       Date:  2004-08

10.  RNA-binding protein Csx1 mediates global control of gene expression in response to oxidative stress.

Authors:  Miguel A Rodríguez-Gabriel; Gavin Burns; W Hayes McDonald; Victoria Martín; John R Yates; Jürg Bähler; Paul Russell
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

View more
  18 in total

1.  The Catalytic Activity of the Ubp3 Deubiquitinating Protease Is Required for Efficient Stress Granule Assembly in Saccharomyces cerevisiae.

Authors:  Regina Nostramo; Sapna N Varia; Bo Zhang; Megan M Emerson; Paul K Herman
Journal:  Mol Cell Biol       Date:  2015-10-26       Impact factor: 4.272

2.  The Aspergillus nidulans Pbp1 homolog is required for normal sexual development and secondary metabolism.

Authors:  Alexandra A Soukup; Gregory J Fischer; Jerry Luo; Nancy P Keller
Journal:  Fungal Genet Biol       Date:  2017-01-09       Impact factor: 3.495

3.  Negative regulation of Candida glabrata Pdr1 by the deubiquitinase subunit Bre5 occurs in a ubiquitin independent manner.

Authors:  Sanjoy Paul; W Hayes McDonald; W Scott Moye-Rowley
Journal:  Mol Microbiol       Date:  2018-09-30       Impact factor: 3.501

4.  Insights into the Role of P-Bodies and Stress Granules in Protein Quality Control.

Authors:  Regina Nostramo; Siyuan Xing; Bo Zhang; Paul K Herman
Journal:  Genetics       Date:  2019-07-08       Impact factor: 4.562

Review 5.  Deubiquitination and the regulation of stress granule assembly.

Authors:  R Nostramo; P K Herman
Journal:  Curr Genet       Date:  2016-02-06       Impact factor: 3.886

6.  UBL/BAG-domain co-chaperones cause cellular stress upon overexpression through constitutive activation of Hsf1.

Authors:  Esben G Poulsen; Caroline Kampmeyer; Franziska Kriegenburg; Jens V Johansen; Kay Hofmann; Christian Holmberg; Rasmus Hartmann-Petersen
Journal:  Cell Stress Chaperones       Date:  2016-12-14       Impact factor: 3.667

7.  A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast.

Authors:  Søs G Mathiassen; Ida B Larsen; Esben G Poulsen; Christian T Madsen; Elena Papaleo; Kresten Lindorff-Larsen; Birthe B Kragelund; Michael L Nielsen; Franziska Kriegenburg; Rasmus Hartmann-Petersen
Journal:  J Biol Chem       Date:  2015-07-07       Impact factor: 5.157

8.  Pdc1 functions in the assembly of P bodies in Schizosaccharomyces pombe.

Authors:  Chun-Yu Wang; Wen-Ling Chen; Shao-Win Wang
Journal:  Mol Cell Biol       Date:  2013-01-14       Impact factor: 4.272

9.  A stress-activated, p38 mitogen-activated protein kinase-ATF/CREB pathway regulates posttranscriptional, sequence-dependent decay of target RNAs.

Authors:  Jun Gao; Jacy L Wagnon; Reine M Protacio; Galina V Glazko; Marjorie Beggs; Vinay Raj; Mari K Davidson; Wayne P Wahls
Journal:  Mol Cell Biol       Date:  2013-06-03       Impact factor: 4.272

10.  A proteomic perspective of Sirtuin 6 (SIRT6) phosphorylation and interactions and their dependence on its catalytic activity.

Authors:  Yana V Miteva; Ileana M Cristea
Journal:  Mol Cell Proteomics       Date:  2013-10-25       Impact factor: 5.911

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.