Literature DB >> 22328430

Using recombineering to generate point mutations:galK-based positive-negative selection method.

Kajal Biswas1, Stacey Stauffer, Shyam K Sharan.   

Abstract

Recombineering is a recombination-based highly efficient method of genetic engineering. It can be used to manipulate the bacterial chromosomal DNA as well as any episomal DNA. Recombineering can be used to insert selectable or nonselectable DNA fragments and subclone DNA fragments without the use of restriction enzymes and also to make precise alterations including single nucleotide changes in the DNA. Here we describe a galactokinase (galK)-based two-step method to generate point mutations in the bacterial artificial chromosome (BAC) insert using the recombineering technology. It takes advantage of the ability to select and also counterselect for the presence of galK.

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Year:  2012        PMID: 22328430      PMCID: PMC6668620          DOI: 10.1007/978-1-61779-564-0_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  Rare germline variants in PALB2 and BRCA2 in familial and sporadic chordoma.

Authors:  Bing Xia; Kajal Biswas; Tzeh K Foo; Thiago T Gomes; Maximilian Riedel-Topper; Eileen Southon; Zhihua Kang; Yanying Huo; Susan Reid; Stacey Stauffer; Weiyin Zhou; Bin Zhu; Hela Koka; Sally Yepes; Seth A Brodie; Kristine Jones; Aurelie Vogt; Bin Zhu; Brian Carter; Neal D Freedman; Belynda Hicks; Meredith Yeager; Stephen J Chanock; Fergus Couch; Dilys M Parry; Alvaro N Monteiro; Alisa M Goldstein; Marcelo A Carvalho; Shyam K Sharan; Xiaohong R Yang
Journal:  Hum Mutat       Date:  2022-07-12       Impact factor: 4.700

2.  Epidemiological and ES cell-based functional evaluation of BRCA2 variants identified in families with breast cancer.

Authors:  Teresa Sullivan; Eswary Thirthagiri; Chan-Eng Chong; Stacey Stauffer; Susan Reid; Eileen Southon; Tiara Hassan; Aravind Ravichandran; Eldarina Wijaya; Joanna Lim; Nur Aishah Mohd Taib; Farhana Fadzli; Cheng Har Yip; Mikael Hartman; Jingmei Li; Rob M van Dam; Susan L North; Ranabir Das; Douglas F Easton; Kajal Biswas; Soo-Hwang Teo; Shyam K Sharan
Journal:  Hum Mutat       Date:  2020-12-31       Impact factor: 4.700

3.  Acquired cross-linker resistance associated with a novel spliced BRCA2 protein variant for molecular phenotyping of BRCA2 disruption.

Authors:  Stefan Meyer; Adam Stevens; Roberto Paredes; Marion Schneider; Michael J Walker; Andrew J K Williamson; Maria-Belen Gonzalez-Sanchez; Stephanie Smetsers; Vineet Dalal; Hsiang Ying Teng; Daniel J White; Sam Taylor; Joanne Muter; Andrew Pierce; Chiara de Leonibus; Davy A P Rockx; Martin A Rooimans; Elaine Spooncer; Stacey Stauffer; Kajal Biswas; Barbara Godthelp; Josephine Dorsman; Peter E Clayton; Shyam K Sharan; Anthony D Whetton
Journal:  Cell Death Dis       Date:  2017-06-15       Impact factor: 8.469

4.  Functional Analysis of a Putative Target of Spatially Varying Selection in the Menin1 Gene of Drosophila melanogaster.

Authors:  Nicolas Svetec; Perot Saelao; Julie M Cridland; Ary A Hoffmann; David J Begun
Journal:  G3 (Bethesda)       Date:  2019-01-09       Impact factor: 3.154

5.  BRCA2-DSS1 interaction is dispensable for RAD51 recruitment at replication-induced and meiotic DNA double strand breaks.

Authors:  Arun Prakash Mishra; Suzanne A Hartford; Sounak Sahu; Kimberly Klarmann; Rajani Kant Chittela; Kajal Biswas; Albert B Jeon; Betty K Martin; Sandra Burkett; Eileen Southon; Susan Reid; Mary E Albaugh; Baktiar Karim; Lino Tessarollo; Jonathan R Keller; Shyam K Sharan
Journal:  Nat Commun       Date:  2022-04-01       Impact factor: 17.694

  5 in total

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