Literature DB >> 22322969

Modulations in restricted amide rotation by steric induced conformational trapping.

V V Krishnan1, William B Thompson, Kalyani Maitra, Santanu Maitra.   

Abstract

The rotation around the amide bond in n class="Chemical">N,N-diethyl-m-toluamide (m-DEET) has been studied extensively and often used in laboratory instructions to demonstrate the phenomenon of chemical exchange. Herein, we show that a simple modification to N,N-diethyl-o-toluamide (o-DEET) significantly alters the dynamics of the restricted rotation around the amide bond due to steric interactions between the ring methyl group and the two N-ethyl groups. This alters the classic two-site exchange due to restricted rotation around the amide bond, to a three-site exchange, with the third conformation trapped at a higher-energy state compared to the other two. This often overlooked phenomenon is elucidated using variable-temperature NMR, two-dimensional exchange spectroscopy and molecular modeling studies.

Entities:  

Year:  2012        PMID: 22322969      PMCID: PMC3272771          DOI: 10.1016/j.cplett.2011.11.058

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  3 in total

Review 1.  Monte Carlo simulation of NMR lineshapes in chemically exchanging spin systems.

Authors:  Zsófia Szalay; János Rohonczy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2009-09-30       Impact factor: 9.795

2.  A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules.

Authors:  A Kumar; R R Ernst; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1980-07-16       Impact factor: 3.575

3.  Solvent effects on chemical exchange in a push-pull ethylene as studied by NMR and electronic structure calculations.

Authors:  Maysoon Ababneh-Khasawneh; Blythe E Fortier-McGill; Marzia E Occhionorelli; Alex D Bain
Journal:  J Phys Chem A       Date:  2011-06-10       Impact factor: 2.781

  3 in total
  5 in total

1.  Molecular Thermodynamics Using Nuclear Magnetic Resonance (NMR) Spectroscopy.

Authors:  Viswanathan V Krishnan
Journal:  Inventions (Basel)       Date:  2019-02-21

2.  Structural and Conformational Studies on Carboxamides of 5,6-Diaminouracils-Precursors of Biologically Active Xanthine Derivatives.

Authors:  Daniel Marx; Gregor Schnakenburg; Stefan Grimme; Christa E Müller
Journal:  Molecules       Date:  2019-06-09       Impact factor: 4.411

3.  Validation of Enthalpy-Entropy Compensation Mechanism in Partial Amide Bond Rotation.

Authors:  Jacob Guerra; Bhvandip Bajwa; Prarthana Kumar; Salvador Vazquez; Viswanathan V Krishnan; Santanu Maitra
Journal:  ACS Omega       Date:  2020-04-13

4.  Equilibrium Dynamics of β-N-Methylamino-L-Alanine (BMAA) and Its Carbamate Adducts at Physiological Conditions.

Authors:  David Zimmerman; Joy J Goto; Viswanathan V Krishnan
Journal:  PLoS One       Date:  2016-08-11       Impact factor: 3.240

5.  Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations.

Authors:  Sungsoo Kim; Jungyu Kim; Jieun Kim; Daeun Won; Suk-Kyu Chang; Wansik Cha; Keunhong Jeong; Sangdoo Ahn; Kyungwon Kwak
Journal:  Molecules       Date:  2018-09-08       Impact factor: 4.411

  5 in total

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