Literature DB >> 22312976

Rapid detection of group I avian adenoviruses by a loop-mediated isothermal amplification.

Zhixun Xie1, Yi Tang, Qing Fan, Jiabo Liu, Yaoshan Pang, Xianwen Deng, Zhiqin Xie, Yi Peng, Liji Xie, Mazhar I Khan.   

Abstract

A loop-mediated isothermal amplification (LAMP) assay was optimized for the rapid detection of Group I avian adenoviruses. A set of six primers was designed from the DNA sequences of hexon genes from Group I avian adenovirus. The assay was performed in a water bath for 60 min at 63 C, and the amplification result was visualized by adding a fluorescence dye reagent or by inspecting the white sediment. The results showed that the LAMP assay could detect all 12 serotypes of Group I avian adenovirus and nine Guangxi Group I avian adenovirus isolates. This avian adenovirus Group I-specific LAMP assay could detect 238 copies of avian adenovirus. No cross-reactions were detected using the LAMP assay with avian adenoviruses type II and III or with other avian viruses. The ability of LAMP to detect Group I avian adenovirus isolates was further evaluated with 184 cloacal swab samples from poultry. In total, 72 out of 184 cloacal swab samples from poultry were identified as positive by LAMP, whereas 45 out of 184 were identified as positive by conventional PCR test. The Group I avian adenovirus specific LAMP results were further confirmed by real-time PCR. This specific LAMP method holds promise as a rapid and specific diagnostic assay for detection of samples from birds suspected of adenovirus infection.

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Year:  2011        PMID: 22312976     DOI: 10.1637/9719-031611-Reg.1

Source DB:  PubMed          Journal:  Avian Dis        ISSN: 0005-2086            Impact factor:   1.577


  6 in total

1.  Using loop-mediated isothermal amplification for visual detection of porcine parvovirus 7.

Authors:  Yong Wang; Da Zhang; Caixia Bai; Menglin Li; Xiaolu Liu; Mengling Peng; Pei Sun; Yongdong Li
Journal:  3 Biotech       Date:  2021-02-02       Impact factor: 2.406

2.  Reverse transcription loop-mediated isothermal amplification assay for rapid detection of Bovine Rotavirus.

Authors:  Zhixun Xie; Qing Fan; Jiabo Liu; Yaoshan Pang; Xianwen Deng; Zhiqin Xie; Xie Liji; Mazhar I Khan
Journal:  BMC Vet Res       Date:  2012-08-15       Impact factor: 2.741

3.  Application of cross-priming amplification (CPA) for detection of fowl adenovirus (FAdV) strains.

Authors:  Jowita Samanta Niczyporuk; Grzegorz Woźniakowski; Elżbieta Samorek-Salamonowicz
Journal:  Arch Virol       Date:  2015-02-06       Impact factor: 2.574

4.  Detection of fowl adenovirus D strains in wild birds in Poland by Loop-Mediated Isothermal Amplification (LAMP).

Authors:  Jowita Samanta Niczyporuk; Wojciech Kozdruń; Hanna Czekaj; Natalia Styś-Fijoł; Karolina Piekarska
Journal:  BMC Vet Res       Date:  2020-02-14       Impact factor: 2.741

5.  A loop-mediated isothermal amplification assay for the visual detection of duck circovirus.

Authors:  Liji Xie; Zhixun Xie; Guangyuan Zhao; Jiabo Liu; Yaoshan Pang; Xianwen Deng; Zhiqin Xie; Qing Fan; Sisi Luo
Journal:  Virol J       Date:  2014-04-29       Impact factor: 4.099

6.  A reverse transcription loop-mediated isothermal amplification method for rapid detection of bovine viral diarrhea virus.

Authors:  Qing Fan; Zhixun Xie; Liji Xie; Jiabo Liu; Yaoshan Pang; Xianwen Deng; Zhiqin Xie; Yi Peng; Xiuqing Wang
Journal:  J Virol Methods       Date:  2012-08-27       Impact factor: 2.014

  6 in total

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