Literature DB >> 22308104

Abundance- and Activity-Based Proteomics in Platelet Biology.

Stephen P Holly1, Xian Chen, Leslie V Parise.   

Abstract

Human platelets are thought to express approximately 2000-3000 proteins, but post-translational modifications, alternatively spliced variants and a rich diversity of vertebrate domain architectures likely make this a conservative estimate. Even though rapidly advancing proteomic techniques have facilitated the identification of roughly one third of the platelet proteome, a combination of abundance-based and activity-based proteomics methodologies is needed for elucidation of platelet functional characteristics including the definition of a "core proteome" and recognition of diverse enzyme activity profiles associated with various physiological states. In this review, we describe the latest mass spectrometry-based techniques capable of providing some of these physiological details required for more comprehensive evaluation of the human platelet repertoire.

Entities:  

Year:  2011        PMID: 22308104      PMCID: PMC3270490          DOI: 10.2174/157016411797247512

Source DB:  PubMed          Journal:  Curr Proteomics        ISSN: 1570-1646            Impact factor:   0.837


  52 in total

1.  Activity-based protein profiling: the serine hydrolases.

Authors:  Y Liu; M P Patricelli; B F Cravatt
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

2.  Chemistry-based functional proteomics reveals novel members of the deubiquitinating enzyme family.

Authors:  Anna Borodovsky; Huib Ovaa; Nagamalleswari Kolli; Tudeviin Gan-Erdene; Keith D Wilkinson; Hidde L Ploegh; Benedikt M Kessler
Journal:  Chem Biol       Date:  2002-10

3.  Platelets express functional Toll-like receptor-4.

Authors:  Graciela Andonegui; Steven M Kerfoot; Kelly McNagny; Kirsten V J Ebbert; Kamala D Patel; Paul Kubes
Journal:  Blood       Date:  2005-06-16       Impact factor: 22.113

Review 4.  Activity-based protein profiling: from enzyme chemistry to proteomic chemistry.

Authors:  Benjamin F Cravatt; Aaron T Wright; John W Kozarich
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

5.  C-reactive protein-mediated low density lipoprotein uptake by macrophages: implications for atherosclerosis.

Authors:  T P Zwaka; V Hombach; J Torzewski
Journal:  Circulation       Date:  2001-03-06       Impact factor: 29.690

6.  Platelet-derived serotonin mediates liver regeneration.

Authors:  Mickael Lesurtel; Rolf Graf; Boris Aleil; Diego J Walther; Yinghua Tian; Wolfram Jochum; Christian Gachet; Michael Bader; Pierre-Alain Clavien
Journal:  Science       Date:  2006-04-07       Impact factor: 47.728

Review 7.  Calpain-mediated regulation of platelet signaling pathways.

Authors:  Shafi M Kuchay; Athar H Chishti
Journal:  Curr Opin Hematol       Date:  2007-05       Impact factor: 3.284

8.  A prospective, blinded determination of the natural history of aspirin resistance among stable patients with cardiovascular disease.

Authors:  Patricia A Gum; Kandice Kottke-Marchant; Patricia A Welsh; Jennifer White; Eric J Topol
Journal:  J Am Coll Cardiol       Date:  2003-03-19       Impact factor: 24.094

9.  Activity-based ubiquitin-specific protease (USP) profiling of virus-infected and malignant human cells.

Authors:  Huib Ovaa; Benedikt M Kessler; Ulrika Rolén; Paul J Galardy; Hidde L Ploegh; Maria G Masucci
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

10.  From genomics to chemical genomics: new developments in KEGG.

Authors:  Minoru Kanehisa; Susumu Goto; Masahiro Hattori; Kiyoko F Aoki-Kinoshita; Masumi Itoh; Shuichi Kawashima; Toshiaki Katayama; Michihiro Araki; Mika Hirakawa
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

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  2 in total

1.  Decreased platelet APP isoform ratios in autosomal dominant Alzheimer's disease: baseline data from a DIAN cohort subset.

Authors:  Pratishtha Chatterjee; Veer B Gupta; Anne M Fagan; Mateusz S Jasielec; Chengjie Xiong; Hamid R Sohrabi; Satvinder Dhaliwal; Kevin Taddei; Pierrick Bourgeat; Belinda M Brown; Tammie Benzinger; Randall J Bateman; John C Morris; Ralph N Martins
Journal:  Curr Alzheimer Res       Date:  2015       Impact factor: 3.498

2.  Creation of a federated database of blood proteins: a powerful new tool for finding and characterizing biomarkers in serum.

Authors:  John Marshall; Peter Bowden; Jean Claude Schmit; Fay Betsou
Journal:  Clin Proteomics       Date:  2014-01-29       Impact factor: 3.988

  2 in total

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