Literature DB >> 22307288

Elevated carbon dioxide alters the structure of soil microbial communities.

Ye Deng1, Zhili He, Meiying Xu, Yujia Qin, Joy D Van Nostrand, Liyou Wu, Bruce A Roe, Graham Wiley, Sarah E Hobbie, Peter B Reich, Jizhong Zhou.   

Abstract

Pyrosequencing analysis of 16S rRNA genes was used to examine impacts of elevated CO(2) (eCO(2)) on soil microbial communities from 12 replicates each from ambient CO(2) (aCO(2)) and eCO(2) settings. The results suggest that the soil microbial community composition and structure significantly altered under conditions of eCO(2), which was closely associated with soil and plant properties.

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Year:  2012        PMID： 22307288      PMCID： PMC3318805          DOI： 10.1128/AEM.06924-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  19 in total

1.  Plant diversity enhances ecosystem responses to elevated CO2 and nitrogen deposition.

Authors:  P B Reich; J Knops; D Tilman; J Craine; D Ellsworth; M Tjoelker; T Lee; D Wedin; S Naeem; D Bahauddin; G Hendrey; S Jose; K Wrage; J Goth; W Bengston
Journal:  Nature       Date:  2001-04-12       Impact factor: 49.962

2.  A globally coherent fingerprint of climate change impacts across natural systems.

Authors:  Camille Parmesan; Gary Yohe
Journal:  Nature       Date:  2003-01-02       Impact factor: 49.962

3.  Bacterial diversity in a glacier foreland of the high Arctic.

Authors:  Ursel M E Schütte; Zaid Abdo; James Foster; Jacques Ravel; John Bunge; Bjørn Solheim; Larry J Forney
Journal:  Mol Ecol       Date:  2010-03       Impact factor: 6.185

4.  Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2.

Authors:  Zhili He; Meiying Xu; Ye Deng; Sanghoon Kang; Laurie Kellogg; Liyou Wu; Joy D Van Nostrand; Sarah E Hobbie; Peter B Reich; Jizhong Zhou
Journal:  Ecol Lett       Date:  2010-03-23       Impact factor: 9.492

5.  Rising atmospheric CO2 reduces sequestration of root-derived soil carbon.

Authors:  James Heath; Edward Ayres; Malcolm Possell; Richard D Bardgett; Helaina I J Black; Helen Grant; Phil Ineson; Gerhard Kerstiens
Journal:  Science       Date:  2005-09-09       Impact factor: 47.728

6.  An Earth-system perspective of the global nitrogen cycle.

Authors:  Nicolas Gruber; James N Galloway
Journal:  Nature       Date:  2008-01-17       Impact factor: 49.962

7.  Terrestrial ecosystem carbon dynamics and climate feedbacks.

Authors:  Martin Heimann; Markus Reichstein
Journal:  Nature       Date:  2008-01-17       Impact factor: 49.962

8.  What have we learned from 15 years of free-air CO2 enrichment (FACE)? A meta-analytic review of the responses of photosynthesis, canopy properties and plant production to rising CO2.

Authors:  Elizabeth A Ainsworth; Stephen P Long
Journal:  New Phytol       Date:  2005-02       Impact factor: 10.151

9.  Elevated atmospheric CO2 affects soil microbial diversity associated with trembling aspen.

Authors:  Celine Lesaulnier; Dimitris Papamichail; Sean McCorkle; Bernard Ollivier; Steven Skiena; Safiyh Taghavi; Donald Zak; Daniel van der Lelie
Journal:  Environ Microbiol       Date:  2008-01-24       Impact factor: 5.491

10.  Pyrosequencing of tagged 16S rRNA gene amplicons for rapid deciphering of the microbiomes of fermented foods such as pearl millet slurries.

Authors:  Christèle Humblot; Jean-Pierre Guyot
Journal:  Appl Environ Microbiol       Date:  2009-05-01       Impact factor: 4.792
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  19 in total

1.  Soil microbial community responses to a decade of warming as revealed by comparative metagenomics.

Authors:  Chengwei Luo; Luis M Rodriguez-R; Eric R Johnston; Liyou Wu; Lei Cheng; Kai Xue; Qichao Tu; Ye Deng; Zhili He; Jason Zhou Shi; Mengting Maggie Yuan; Rebecca A Sherry; Dejun Li; Yiqi Luo; Edward A G Schuur; Patrick Chain; James M Tiedje; Jizhong Zhou; Konstantinos T Konstantinidis
Journal:  Appl Environ Microbiol       Date:  2013-12-27       Impact factor: 4.792

2.  Fungal communities respond to long-term CO2 elevation by community reassembly.

Authors:  Qichao Tu; Mengting Yuan; Zhili He; Ye Deng; Kai Xue; Liyou Wu; Sarah E Hobbie; Peter B Reich; Jizhong Zhou
Journal:  Appl Environ Microbiol       Date:  2015-01-23       Impact factor: 4.792

3.  Assessment of microbial diversity bias associated with soil heterogeneity and sequencing resolution in pyrosequencing analyses.

Authors:  Sokhee P Jung; Hojeong Kang
Journal:  J Microbiol       Date:  2014-05-13       Impact factor: 3.422

4.  Distinct responses of soil microbial communities to elevated CO2 and O3 in a soybean agro-ecosystem.

Authors:  Zhili He; Jinbo Xiong; Angela D Kent; Ye Deng; Kai Xue; Gejiao Wang; Liyou Wu; Joy D Van Nostrand; Jizhong Zhou
Journal:  ISME J       Date:  2013-10-10       Impact factor: 10.302

5.  Divergent Responses of Forest Soil Microbial Communities under Elevated CO2 in Different Depths of Upper Soil Layers.

Authors:  Hao Yu; Zhili He; Aijie Wang; Jianping Xie; Liyou Wu; Joy D Van Nostrand; Decai Jin; Zhimin Shao; Christopher W Schadt; Jizhong Zhou; Ye Deng
Journal:  Appl Environ Microbiol       Date:  2017-12-15       Impact factor: 4.792

6.  Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis.

Authors:  Liyou Wu; Chongqing Wen; Yujia Qin; Huaqun Yin; Qichao Tu; Joy D Van Nostrand; Tong Yuan; Menting Yuan; Ye Deng; Jizhong Zhou
Journal:  BMC Microbiol       Date:  2015-06-19       Impact factor: 3.605

7.  Soil bacterial endemism and potential functional redundancy in natural broadleaf forest along a latitudinal gradient.

Authors:  Yuguang Zhang; Jing Cong; Hui Lu; Ye Deng; Xiao Liu; Jizhong Zhou; Diqiang Li
Journal:  Sci Rep       Date:  2016-06-30       Impact factor: 4.379

8.  Elevated CO₂ influences microbial carbon and nitrogen cycling.

Authors:  Meiying Xu; Zhili He; Ye Deng; Liyou Wu; Joy D van Nostrand; Sarah E Hobbie; Peter B Reich; Jizhong Zhou
Journal:  BMC Microbiol       Date:  2013-05-29       Impact factor: 3.605

9.  Analysis of run-to-run variation of bar-coded pyrosequencing for evaluating bacterial community shifts and individual taxa dynamics.

Authors:  Yuan Ge; Joshua P Schimel; Patricia A Holden
Journal:  PLoS One       Date:  2014-06-09       Impact factor: 3.240

10.  Substrate Type and Free Ammonia Determine Bacterial Community Structure in Full-Scale Mesophilic Anaerobic Digesters Treating Cattle or Swine Manure.

Authors:  Jiabao Li; Junpeng Rui; Minjie Yao; Shiheng Zhang; Xuefeng Yan; Yuanpeng Wang; Zhiying Yan; Xiangzhen Li
Journal:  Front Microbiol       Date:  2015-11-30       Impact factor: 5.640
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