Literature DB >> 22305527

DDOST mutations identified by whole-exome sequencing are implicated in congenital disorders of glycosylation.

Melanie A Jones1, Bobby G Ng, Shruti Bhide, Ephrem Chin, Devin Rhodenizer, Ping He, Marie-Estelle Losfeld, Miao He, Kimiyo Raymond, Gerard Berry, Hudson H Freeze, Madhuri R Hegde.   

Abstract

Congenital disorders of glycosylation (CDG) are inherited autosomal-recessive diseases that impair N-glycosylation. Approximately 20% of patients do not survive beyond the age of 5 years old as a result of widespread organ dysfunction. Although most patients receive a CDG diagnosis based on abnormal glycosylation of transferrin, this test cannot provide a genetic diagnosis; indeed, many patients with abnormal transferrin do not have mutations in any known CDG genes. Here, we combined biochemical analysis with whole-exome sequencing (WES) to identify the genetic defect in an untyped CDG patient, and we found a 22 bp deletion and a missense mutation in DDOST, whose product is a component of the oligosaccharyltransferase complex that transfers the glycan chain from a lipid carrier to nascent proteins in the endoplasmic reticulum lumen. Biochemical analysis with three biomarkers revealed that N-glycosylation was decreased in the patient's fibroblasts. Complementation with wild-type-DDOST cDNA in patient fibroblasts restored glycosylation, indicating that the mutations were pathological. Our results highlight the power of combining WES and biochemical studies, including a glyco-complementation system, for identifying and confirming the defective gene in an untyped CDG patient. This approach will be very useful for uncovering other types of CDG as well.
Copyright © 2012 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22305527      PMCID: PMC3276676          DOI: 10.1016/j.ajhg.2011.12.024

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  23 in total

Review 1.  Oligosaccharyltransferase: the central enzyme of N-linked protein glycosylation.

Authors:  Elisabeth Mohorko; Rudi Glockshuber; Markus Aebi
Journal:  J Inherit Metab Dis       Date:  2011-05-26       Impact factor: 4.982

2.  Substrate specificity of the glycosyl donor for oligosaccharyl transferase.

Authors:  V W Tai; B Imperiali
Journal:  J Org Chem       Date:  2001-09-21       Impact factor: 4.354

3.  Mutations in PMM2 that cause congenital disorders of glycosylation, type Ia (CDG-Ia).

Authors:  G Matthijs; E Schollen; C Bjursell; A Erlandson; H Freeze; F Imtiaz; S Kjaergaard; T Martinsson; M Schwartz; N Seta; S Vuillaumier-Barrot; V Westphal; B Winchester
Journal:  Hum Mutat       Date:  2000-11       Impact factor: 4.878

4.  The efficiency of N-linked glycosylation of bovine DNase I depends on the Asn-Xaa-Ser/Thr sequence and the tissue of origin.

Authors:  A Nishikawa; S Mizuno
Journal:  Biochem J       Date:  2001-04-01       Impact factor: 3.857

5.  The highly conserved Stt3 protein is a subunit of the yeast oligosaccharyltransferase and forms a subcomplex with Ost3p and Ost4p.

Authors:  D Karaoglu; D J Kelleher; R Gilmore
Journal:  J Biol Chem       Date:  1997-12-19       Impact factor: 5.157

6.  Congenital disorder of glycosylation type Ia (CDG-Ia): phenotypic spectrum of the R141H/F119L genotype.

Authors:  S Kjaergaard; M Schwartz; F Skovby
Journal:  Arch Dis Child       Date:  2001-09       Impact factor: 3.791

7.  Hydrophobic Man-1-P derivatives correct abnormal glycosylation in Type I congenital disorder of glycosylation fibroblasts.

Authors:  Erik A Eklund; Nabyl Merbouh; Mie Ichikawa; Atsushi Nishikawa; Jessica M Clima; James A Dorman; Thomas Norberg; Hudson H Freeze
Journal:  Glycobiology       Date:  2005-08-03       Impact factor: 4.313

8.  Genome organization of human 48-kDa oligosaccharyltransferase (DDOST).

Authors:  T Yamagata; T Tsuru; M Y Momoi; K Suwa; Y Nozaki; T Mukasa; H Ohashi; Y Fukushima; T Momoi
Journal:  Genomics       Date:  1997-11-01       Impact factor: 5.736

9.  Targeted polymerase chain reaction-based enrichment and next generation sequencing for diagnostic testing of congenital disorders of glycosylation.

Authors:  Melanie A Jones; Shruti Bhide; Ephrem Chin; Bobby G Ng; Devin Rhodenizer; Victor W Zhang; Jessica J Sun; Alice Tanner; Hudson H Freeze; Madhuri R Hegde
Journal:  Genet Med       Date:  2011-11       Impact factor: 8.822

10.  The yeast WBP1 is essential for oligosaccharyl transferase activity in vivo and in vitro.

Authors:  S te Heesen; B Janetzky; L Lehle; M Aebi
Journal:  EMBO J       Date:  1992-06       Impact factor: 11.598

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  31 in total

1.  Neurology of inherited glycosylation disorders.

Authors:  Hudson H Freeze; Erik A Eklund; Bobby G Ng; Marc C Patterson
Journal:  Lancet Neurol       Date:  2012-05       Impact factor: 44.182

Review 2.  N-glycoprotein macroheterogeneity: biological implications and proteomic characterization.

Authors:  Lucia F Zacchi; Benjamin L Schulz
Journal:  Glycoconj J       Date:  2015-12-05       Impact factor: 2.916

3.  A congenital disorder of deglycosylation: Biochemical characterization of N-glycanase 1 deficiency in patient fibroblasts.

Authors:  Ping He; Jeff E Grotzke; Bobby G Ng; Murat Gunel; Hamed Jafar-Nejad; Peter Cresswell; Gregory M Enns; Hudson H Freeze
Journal:  Glycobiology       Date:  2015-04-21       Impact factor: 4.313

Review 4.  Diabetic kidney disease: a role for advanced glycation end-product receptor 1 (AGE-R1)?

Authors:  Aowen Zhuang; Josephine M Forbes
Journal:  Glycoconj J       Date:  2016-06-06       Impact factor: 2.916

5.  Mutations in the translocon-associated protein complex subunit SSR3 cause a novel congenital disorder of glycosylation.

Authors:  Bobby G Ng; Charles M Lourenço; Marie-Estelle Losfeld; Kati J Buckingham; Martin Kircher; Deborah A Nickerson; Jay Shendure; Michael J Bamshad; Hudson H Freeze
Journal:  J Inherit Metab Dis       Date:  2019-04-16       Impact factor: 4.982

6.  Increased Clinical Sensitivity and Specificity of Plasma Protein N-Glycan Profiling for Diagnosing Congenital Disorders of Glycosylation by Use of Flow Injection-Electrospray Ionization-Quadrupole Time-of-Flight Mass Spectrometry.

Authors:  Jie Chen; Xueli Li; Andrew Edmondson; Gail Ditewig Meyers; Kosuke Izumi; Amanda M Ackermann; Eva Morava; Can Ficicioglu; Michael J Bennett; Miao He
Journal:  Clin Chem       Date:  2019-02-15       Impact factor: 8.327

Review 7.  N-linked glycosylation and homeostasis of the endoplasmic reticulum.

Authors:  Natalia Cherepanova; Shiteshu Shrimal; Reid Gilmore
Journal:  Curr Opin Cell Biol       Date:  2016-04-14       Impact factor: 8.382

Review 8.  Exome sequencing greatly expedites the progressive research of Mendelian diseases.

Authors:  Xuejun Zhang
Journal:  Front Med       Date:  2014-01-03       Impact factor: 4.592

Review 9.  Understanding human glycosylation disorders: biochemistry leads the charge.

Authors:  Hudson H Freeze
Journal:  J Biol Chem       Date:  2013-01-17       Impact factor: 5.157

10.  A new congenital disorder of glycosylation caused by a mutation in SSR4, the signal sequence receptor 4 protein of the TRAP complex.

Authors:  Marie Estelle Losfeld; Bobby G Ng; Martin Kircher; Kati J Buckingham; Emily H Turner; Alexey Eroshkin; Joshua D Smith; Jay Shendure; Deborah A Nickerson; Michael J Bamshad; Hudson H Freeze
Journal:  Hum Mol Genet       Date:  2013-11-11       Impact factor: 6.150

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