Literature DB >> 22302390

Diagnosis of mitochondrial disorders applying massive pyrosequencing.

Marcelo Andrés Kauffman1, Dolores Gonzlez-Morón, Damián Consalvo, Gastón Westergaard, Martín Vazquez, Estefanía Mancini, Ana Lía Taratuto, Raúl Rey, Silvia Kochen.   

Abstract

Mitochondrial disorders are a frequent cause of neurological disability affecting children and adults. Traditionally, molecular diagnosis of mitochondrial diseases was mostly accomplished by the use of Sanger sequencing and PCR-RFLP. However, there are particular drawbacks associated with the use of these methods. Recent multidisciplinary advances have led to new sequencing methods that may overcome these limitations. Our goal was to explore the use of a next generation sequencing platform in the molecular diagnosis of mitochondrial diseases reporting our findings in adult patients that present with a clinical-pathological diagnosis of a mitochondrial encephalomyopathy. Complete genomic sequences of mitochondrial DNA were obtained by 454 massive pyrosequencing from blood samples. The analysis of these sequences allowed us to identify two diagnostic pathogenic mutations and 74 homoplasmic polymorphisms, useful for obtaining high-resolution mitochondrial haplogroups. In summary, molecular diagnosis of mitochondrial disorders could be efficiently done from readily accessible samples, such as blood, with the use of a new sequencing platform.

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Year:  2012        PMID: 22302390     DOI: 10.1007/s11033-012-1471-9

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  23 in total

1.  Epidemiology of the mitochondrial DNA 8344A>G mutation for the myoclonus epilepsy and ragged red fibres (MERRF) syndrome.

Authors:  A M Remes; M Kärppä; J S Moilanen; H Rusanen; I E Hassinen; K Majamaa; S Uimonen; M Sorri; P I Salmela; S-L Karvonen; S-L Karvonen
Journal:  J Neurol Neurosurg Psychiatry       Date:  2003-08       Impact factor: 10.154

2.  Mitochondrial DNA deletion mutations in patients with neuropsychiatric symptoms.

Authors:  Maiko Kato; Masayuki Nakamura; Mio Ichiba; Akiyuki Tomiyasu; Hirochika Shimo; Itsuro Higuchi; Shu-ichi Ueno; Akira Sano
Journal:  Neurosci Res       Date:  2010-12-24       Impact factor: 3.304

Review 3.  Detection of mutations in mtDNA.

Authors:  Ali Naini; Sara Shanske
Journal:  Methods Cell Biol       Date:  2007       Impact factor: 1.441

4.  The typical MERRF (A8344G) mutation of the mitochondrial DNA associated with depressive mood disorders.

Authors:  Mari Judit Molnar; Jozsef Perenyi; Eva Siska; George Nemeth; Zoltan Nagy
Journal:  J Neurol       Date:  2009-03-05       Impact factor: 4.849

Review 5.  Sequencing technologies - the next generation.

Authors:  Michael L Metzker
Journal:  Nat Rev Genet       Date:  2009-12-08       Impact factor: 53.242

6.  A novel mutation in the mitochondrial 16S rRNA gene in a patient with MELAS syndrome, diabetes mellitus, hyperthyroidism and cardiomyopathy.

Authors:  R H Hsieh; J Y Li; C Y Pang; Y H Wei
Journal:  J Biomed Sci       Date:  2001 Jul-Aug       Impact factor: 8.410

7.  Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes.

Authors:  Mingkun Li; Anna Schönberg; Michael Schaefer; Roland Schroeder; Ivane Nasidze; Mark Stoneking
Journal:  Am J Hum Genet       Date:  2010-08-13       Impact factor: 11.025

8.  Tablet--next generation sequence assembly visualization.

Authors:  Iain Milne; Micha Bayer; Linda Cardle; Paul Shaw; Gordon Stephen; Frank Wright; David Marshall
Journal:  Bioinformatics       Date:  2009-12-04       Impact factor: 6.937

9.  Mitochondrial DNA variant discovery and evaluation in human Cardiomyopathies through next-generation sequencing.

Authors:  Michael V Zaragoza; Joseph Fass; Marta Diegoli; Dawei Lin; Eloisa Arbustini
Journal:  PLoS One       Date:  2010-08-20       Impact factor: 3.240

10.  Heteroplasmic mitochondrial DNA mutations in normal and tumour cells.

Authors:  Yiping He; Jian Wu; Devin C Dressman; Christine Iacobuzio-Donahue; Sanford D Markowitz; Victor E Velculescu; Luis A Diaz; Kenneth W Kinzler; Bert Vogelstein; Nickolas Papadopoulos
Journal:  Nature       Date:  2010-03-03       Impact factor: 49.962

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  2 in total

1.  Progressive external ophthalmoplegia (PEO) due to a mutation in the C10orf2 (PEO1) gene mimicking a myasthenic crisis.

Authors:  Dolores Gonzalez-Moron; Jose Bueri; Marcelo Andres Kauffman
Journal:  BMJ Case Rep       Date:  2013-09-07

2.  Germline and somatic mutations in cortical malformations: Molecular defects in Argentinean patients with neuronal migration disorders.

Authors:  Dolores González-Morón; Sebastián Vishnopolska; Damián Consalvo; Nancy Medina; Marcelo Marti; Marta Córdoba; Cecilia Vazquez-Dusefante; Santiago Claverie; Sergio Alejandro Rodríguez-Quiroga; Patricia Vega; Walter Silva; Silvia Kochen; Marcelo Andrés Kauffman
Journal:  PLoS One       Date:  2017-09-27       Impact factor: 3.240

  2 in total

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