Literature DB >> 22297997

Crystallization and preliminary X-ray crystallographic analysis of dioscorin from Dioscorea japonica.

You-Lin Xue1, Takuya Miyakawa, Yoriko Sawano, Masaru Tanokura.   

Abstract

Dioscorin, the major tuber storage protein in yam, has been reported to possess carbonic anhydrase, trypsin inhibitor, angiotensin-converting enzyme (ACE) inhibitor, free-radical scavenger, dehydroascorbate reductase and monodehydroascorbate reductase activities. Recent research has also found that dioscorin can enhance immune modulation via the toll-like receptor 4 (TLR-4) signal transduction pathway in RAW 264.7 cells, murine bone-marrow cells and human monocytes ex vivo. Resolving the structure of dioscorin would help in better understanding its activities and would provide clues to understanding the mechanism of its multiple functions. The full-length protein (residues 1-246) with an additional His(6) tag at the N-terminus was expressed in Escherichia coli Rosetta (DE3) cells. After His-tag cleavage and purification, the protein was crystallized by the sitting-drop vapour-diffusion method at 278 K. An X-ray diffraction data set was collected to a resolution of 2.11 Å using a synchrotron X-ray source. The crystal belonged to space group C222(1), with unit-cell parameters a = 83.5, b = 156.8, c = 83.6 Å, and was estimated to contain two protein molecules per asymmetric unit.

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Year:  2012        PMID: 22297997      PMCID: PMC3274401          DOI: 10.1107/S1744309111053723

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

1.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

2.  Dioscorin, the major tuber storage protein of yam (Dioscorea batatas decne) with carbonic anhydrase and trypsin inhibitor activities.

Authors:  W C Hou; J S Liu; H J Chen; T E Chen; C F Chang; Y H Lin
Journal:  J Agric Food Chem       Date:  1999-05       Impact factor: 5.279

3.  Cloning of genes and enzymatic characterizations of novel dioscorin isoforms from Dioscorea japonica.

Authors:  You-Lin Xue; Takuya Miyakawa; Yoriko Sawano; Masaru Tanokura
Journal:  Plant Sci       Date:  2011-11-04       Impact factor: 4.729

4.  Antioxidant activities of dioscorin, the storage protein of yam (Dioscorea batatas Decne) tuber.

Authors:  W C Hou; M H Lee; H J Chen; W L Liang; C H Han; Y W Liu; Y H Lin
Journal:  J Agric Food Chem       Date:  2001-10       Impact factor: 5.279

5.  Both dioscorin, the tuber storage protein of yam (Dioscorea alata cv. Tainong No. 1), and its peptic hydrolysates exhibited angiotensin converting enzyme inhibitory activities.

Authors:  Feng-Lin Hsu; Yaw-Huei Lin; Mei-Hsien Lee; Chien-Liang Lin; Wen-Chi Hou
Journal:  J Agric Food Chem       Date:  2002-10-09       Impact factor: 5.279

6.  Crystal structure of carbonic anhydrase from Neisseria gonorrhoeae and its complex with the inhibitor acetazolamide.

Authors:  S Huang; Y Xue; E Sauer-Eriksson; L Chirica; S Lindskog; B H Jonsson
Journal:  J Mol Biol       Date:  1998       Impact factor: 5.469

7.  Proteinase inhibitor from ginkgo seeds is a member of the plant nonspecific lipid transfer protein gene family.

Authors:  Yoriko Sawano; Ken-ichi Hatano; Takuya Miyakawa; Hideki Komagata; Yumiko Miyauchi; Hiroshi Yamazaki; Masaru Tanokura
Journal:  Plant Physiol       Date:  2008-02-27       Impact factor: 8.340

8.  Immunomodulatory activity of dioscorin, the storage protein of yam (Dioscorea alata cv. Tainong No. 1) tuber.

Authors:  Yen-Wenn Liu; Huey-Fang Shang; Chung-Kwe Wang; Feng-Lin Hsu; Wen-Chi Hou
Journal:  Food Chem Toxicol       Date:  2007-06-14       Impact factor: 6.023

9.  Effects of oral administration of yam tuber storage protein, dioscorin, to BALB/c mice for 21-days on immune responses.

Authors:  Yen-Wenn Liu; Ju-Chi Liu; Chun-Yao Huang; Chung-Kwe Wang; Huey-Fang Shang; Wen-Chi Hou
Journal:  J Agric Food Chem       Date:  2009-10-14       Impact factor: 5.279

10.  Isolation and characterisation of cDNA clones representing the genes encoding the major tuber storage protein (dioscorin) of yam (Dioscorea cayenensis Lam.).

Authors:  R S Conlan; L A Griffiths; J A Napier; P R Shewry; S Mantell; C Ainsworth
Journal:  Plant Mol Biol       Date:  1995-06       Impact factor: 4.076

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