Literature DB >> 22297529

The dsDNA packaging motor in bacteriophage ø29.

Marc C Morais1.   

Abstract

The tailed dsDNA bacteriophage ø29 packages its 19.3-kb genome into a pre-assembled prolate icosahedral procapsid structure using a phage-encoded macromolecular motor. This process is remarkable considering that compaction of DNA to near crystalline densities within the confined space of the capsid requires that the motor work against considerable entropic, enthalpic, and DNA bending energies. The heart of the bacteriophage ø29 packaging motor consists of three macromolecular components: the connector protein, an RNA molecule known as the pRNA, and an ATPase. The pRNA is thus far unique to ø29, but the connector and ATPase are homologous to portal and terminase proteins, respectively, in other tailed dsDNA bacteriophages. Despite decades of effort and a wealth of genetic, biochemical, biophysical, structural, and single particle data, the mechanism of DNA packaging in bacteriophage ø29 remains elusive. In this chapter, we describe the development of a highly efficient in vitro DNA packaging system for ø29, review the data available for each individual macromolecular component in the packaging motor, and present and evaluate various packaging mechanisms that have been proposed to explain the available data.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22297529     DOI: 10.1007/978-1-4614-0980-9_23

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  26 in total

1.  Continuous allosteric regulation of a viral packaging motor by a sensor that detects the density and conformation of packaged DNA.

Authors:  Zachary T Berndsen; Nicholas Keller; Douglas E Smith
Journal:  Biophys J       Date:  2015-01-20       Impact factor: 4.033

2.  Breaking the symmetry of a viral capsid.

Authors:  Marc C Morais
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-03       Impact factor: 11.205

Review 3.  Molecular architecture of tailed double-stranded DNA phages.

Authors:  Andrei Fokine; Michael G Rossmann
Journal:  Bacteriophage       Date:  2014-02-21

4.  Forces from the Portal Govern the Late-Stage DNA Transport in a Viral DNA Packaging Nanomotor.

Authors:  Peng Jing; Benjamin Burris; Rong Zhang
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

5.  DNA Conformational Changes Play a Force-Generating Role during Bacteriophage Genome Packaging.

Authors:  Kim A Sharp; Xiang-Jun Lu; Gino Cingolani; Stephen C Harvey
Journal:  Biophys J       Date:  2019-04-30       Impact factor: 4.033

6.  Ultrastructural analysis of bacteriophage Φ29 during infection of Bacillus subtilis.

Authors:  Madeline M Farley; Jiagang Tu; Daniel B Kearns; Ian J Molineux; Jun Liu
Journal:  J Struct Biol       Date:  2016-07-29       Impact factor: 2.867

7.  The varicella-zoster virus portal protein is essential for cleavage and packaging of viral DNA.

Authors:  Melissa A Visalli; Brittany L House; Anca Selariu; Hua Zhu; Robert J Visalli
Journal:  J Virol       Date:  2014-05-07       Impact factor: 5.103

8.  The scrunchworm hypothesis: transitions between A-DNA and B-DNA provide the driving force for genome packaging in double-stranded DNA bacteriophages.

Authors:  Stephen C Harvey
Journal:  J Struct Biol       Date:  2014-12-05       Impact factor: 2.867

Review 9.  Mechanisms of DNA Packaging by Large Double-Stranded DNA Viruses.

Authors:  Venigalla B Rao; Michael Feiss
Journal:  Annu Rev Virol       Date:  2015-09-10       Impact factor: 10.431

10.  Repulsive DNA-DNA interactions accelerate viral DNA packaging in phage Phi29.

Authors:  Nicholas Keller; Damian delToro; Shelley Grimes; Paul J Jardine; Douglas E Smith
Journal:  Phys Rev Lett       Date:  2014-06-17       Impact factor: 9.161

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.