Literature DB >> 22297513

Short noncontractile tail machines: adsorption and DNA delivery by podoviruses.

Sherwood R Casjens1, Ian J Molineux.   

Abstract

Tailed dsDNA bacteriophage virions bind to susceptible cells with the tips of their tails and then deliver their DNA through the tail into the cells to initiate infection. This chapter discusses what is known about this process in the short-tailed phages (Podoviridae). Their short tails require that many of these virions adsorb to the outer layers of the cell and work their way down to the outer membrane surface before releasing their DNA. Interestingly, the receptor-binding protein of many short-tailed phages (and some with long tails) has an enzymatic activity that cleaves their polysaccharide receptors. Reversible adsorption and irreversible adsorption to primary and secondary receptors are discussed, including how sequence divergence in tail fiber and tailspike proteins leads to different host specificities. Upon reaching the outer membrane of Gram-negative cells, some podoviral tail machines release virion proteins into the cell that help the DNA efficiently traverse the outer layers of the cell and/or prepare the cell cytoplasm for phage genome arrival. Podoviruses utilize several rather different variations on this theme. The virion DNA is then released into the cell; the energetics of this process is discussed. Phages like T7 and N4 deliver their DNA relatively slowly, using enzymes to pull the genome into the cell. At least in part this mechanism ensures that genes in late-entering DNA are not expressed at early times. On the other hand, phages like P22 probably deliver their DNA more rapidly so that it can be circularized before the cascade of gene expression begins.

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Year:  2012        PMID: 22297513     DOI: 10.1007/978-1-4614-0980-9_7

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  62 in total

1.  Mycobacteriophage cell binding proteins for the capture of mycobacteria.

Authors:  Denis Arutyunov; Upasana Singh; Amr El-Hawiet; Henrique Dos Santos Seckler; Sanaz Nikjah; Maju Joe; Yu Bai; Todd L Lowary; John S Klassen; Stephane Evoy; Christine M Szymanski
Journal:  Bacteriophage       Date:  2014-12-16

Review 2.  Minicells, Back in Fashion.

Authors:  Madeline M Farley; Bo Hu; William Margolin; Jun Liu
Journal:  J Bacteriol       Date:  2016-03-31       Impact factor: 3.490

3.  Crystal structure of pb9, the distal tail protein of bacteriophage T5: a conserved structural motif among all siphophages.

Authors:  Ali Flayhan; Frédéric M D Vellieux; Rudi Lurz; Olivier Maury; Carlos Contreras-Martel; Eric Girard; Pascale Boulanger; Cécile Breyton
Journal:  J Virol       Date:  2013-10-23       Impact factor: 5.103

4.  Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex.

Authors:  Van Son Nguyen; Laureen Logger; Silvia Spinelli; Pierre Legrand; Thi Thanh Huyen Pham; Thi Trang Nhung Trinh; Yassine Cherrak; Abdelrahim Zoued; Aline Desmyter; Eric Durand; Alain Roussel; Christine Kellenberger; Eric Cascales; Christian Cambillau
Journal:  Nat Microbiol       Date:  2017-06-26       Impact factor: 17.745

5.  Homologues of Genetic Transformation DNA Import Genes Are Required for Rhodobacter capsulatus Gene Transfer Agent Recipient Capability Regulated by the Response Regulator CtrA.

Authors:  Cedric A Brimacombe; Hao Ding; Jeanette A Johnson; J Thomas Beatty
Journal:  J Bacteriol       Date:  2015-06-01       Impact factor: 3.490

Review 6.  Popping the cork: mechanisms of phage genome ejection.

Authors:  Ian J Molineux; Debabrata Panja
Journal:  Nat Rev Microbiol       Date:  2013-02-04       Impact factor: 60.633

7.  Themes and variations of viral small terminase proteins.

Authors:  Carolyn M Teschke
Journal:  Structure       Date:  2012-08-08       Impact factor: 5.006

8.  Expression, purification, crystallization and preliminary X-ray diffraction analysis of a lactococcal bacteriophage small terminase subunit.

Authors:  Bin Ren; Tam M Pham; Regina Surjadi; Christine P Robinson; Thien-Kim Le; P Scott Chandry; Thomas S Peat; William J McKinstry
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-02-22

9.  Structural ensemble and dynamics of toroidal-like DNA shapes in bacteriophage ϕ29 exit cavity.

Authors:  Andrew D Hirsh; Maryna Taranova; Troy A Lionberger; Todd D Lillian; Ioan Andricioaei; N C Perkins
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

10.  Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut.

Authors:  Natalya Yutin; Kira S Makarova; Ayal B Gussow; Mart Krupovic; Anca Segall; Robert A Edwards; Eugene V Koonin
Journal:  Nat Microbiol       Date:  2017-11-13       Impact factor: 17.745

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