Literature DB >> 22295867

Mitochondrial genome of the cockscomb pearl mussel Cristaria plicata (Bivalvia, Unionoida, Unionidae).

Jin Hee Lee1, Eun Hwa Choi, Sang Ki Kim, Shi Hyun Ryu, Ui Wook Hwang.   

Abstract

The complete mitochondrial genome sequence of the cockscomb pearl mussel Cristaria plicata, which is an endangered species in South Korea, was sequenced. The circle genome (15,708 bp in size) consists of 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. There were 26 noncoding regions (NCs) found throughout the mitogenome of C. plicata, ranging in size from 2 to 327 bp, and the two largest NC regions, NC286 and NC326, were found between ND5 and tRNA(Gln) (286 bp) and between tRNA(Glu) and ND2 (326 bp), respectively. The 13 mitochondrial protein-coding genes of a female individual of C. plicata collected from Korea (15,708 bp) were compared to those of the Chinese individual (15,712 bp) published before. The result showed that ND3 is the most conserved with 100% nucleotide similarity, and each of the other protein-coding genes has ca. 99%, respectively. The two largest NCs among 26 NCs have totally 98% nucleotide similarity between Korean and Chinese ones.

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Year:  2012        PMID: 22295867     DOI: 10.3109/19401736.2011.643882

Source DB:  PubMed          Journal:  Mitochondrial DNA        ISSN: 1940-1736


  4 in total

1.  Sequencing, De Novo Assembly, and Annotation of the Transcriptome of the Endangered Freshwater Pearl Bivalve, Cristaria plicata, Provides Novel Insights into Functional Genes and Marker Discovery.

Authors:  Bharat Bhusan Patnaik; Tae Hun Wang; Se Won Kang; Hee-Ju Hwang; So Young Park; Eun Bi Park; Jong Min Chung; Dae Kwon Song; Changmu Kim; Soonok Kim; Jun Sang Lee; Yeon Soo Han; Hong Seog Park; Yong Seok Lee
Journal:  PLoS One       Date:  2016-02-12       Impact factor: 3.240

2.  Are Cristaria herculea (Middendorff, 1847) and Cristaria plicata (Leach, 1815) (Bivalvia, Unionidae) separate species?

Authors:  Olga K Klishko; Manuel Lopes-Lima; Elsa Froufe; Arthur E Bogan
Journal:  Zookeys       Date:  2014-09-01       Impact factor: 1.546

3.  Systematics and distribution of Cristaria plicata (Bivalvia, Unionidae) from the Russian Far East.

Authors:  Olga K Klishko; Manuel Lopes-Lima; Elsa Froufe; Arthur E Bogan; Vera Y Abakumova
Journal:  Zookeys       Date:  2016-04-12       Impact factor: 1.546

4.  Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA.

Authors:  Eun Hwa Choi; Gyeongmin Kim; Seung Hyun Cha; Jun-Sang Lee; Shi Hyun Ryu; Ho Young Suk; Young Sup Lee; Su Youn Baek; Ui Wook Hwang
Journal:  Sci Rep       Date:  2020-10-06       Impact factor: 4.379

  4 in total

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