| Literature DB >> 22294186 |
W M Liu1, J L Dennis, A M Gravett, C Chanthirakumar, E Kaminska, G Coulton, D W Fowler, M Bodman-Smith, A G Dalgleish.
Abstract
BACKGROUND: There is evidence that tumours produce substances such as cytokines and microvesicular bodies bearing bioactive molecules, which support the carcinogenic process. Furthermore, chemotherapy has also been shown to modify these exudates and in doing so, neutralise their tumourigenic influence.Entities:
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Year: 2012 PMID: 22294186 PMCID: PMC3305950 DOI: 10.1038/bjc.2012.13
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
Figure 1Effects of treatment on cytokine profile. A549, HCT116 and MCF7 cells were cultured with PBS (Cont), CPM or OXP for 72 h before assessing the levels of 46 analytes by a multiplex immunoassay (A–C). The amounts of VEGF in the supernatants were also specifically assessed by ELISA (D). Data for VEGF represent the mean and s.d.s of three separate experiments, and P-values are from paired t-tests.
Figure 2Microvesicles are altered by treatment. A549, HCT116 and MCF7 cells were cultured with PBS (U), CPM (C) or OXP (O) for 72 h before microvesicles were extracted. The protein content of these particles from 10 ml of supernatant was assessed by BCA testing (A).The effects of supernatants on the ERK and PI3-K in HUVECs were also examined by western blotting (B). +ve refers to effects of endothelial cell medium. Venn analysis of the genes called present in the microvesicles following treatments revealed a large number of genes was common to each condition (C). *P<0.05 by paired t-tests. All supernatant samples naturally included FBS as part of the exhausted media from which they were derived, and changes in the microvesicle portion would account for any microvesicles derived from FBS.
Figure 3The effect of supernatants on tubulogenesis. HUVEC were cultured with the supernatants derived from A549 cells, and the potential of HUVECs cells to form primitive tube-networks was assessed upon growth factor reduced Matrigel. Tube formation was seen when HUVECs were cultured with CONT-supernatants; however, this was significantly reduced when OXP-supernatants were used. Standard culture medium (basal medium) for tumours induced no tube-formation, as did basal medium spiked with CPM or OXP. Supernatants were then deconstructed into a microvesicular fraction and a cytokine fraction (cyt. fraction), and the effects that these components had on tubulogenesis also assessed. AngioQuant software (see text) was employed to enumerate tube formation, and the values represent the means and s.d.s of four separate samples.
Top-40 genes present in tumour microvesicles
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| 3193 | 3193 | 3193 | LAIR1 | Leukocyte immunoglobulin-like receptor 1 | 438 | 132 | 910 | SALL3 | |
| 2720 | 2720 | 2720 | IMAA | Pseudogene | 421 | 417 | 383 | CDAN1 | Congenital dyserythropoietic anaemia type 1 |
| 2146 | 2084 | 2146 | CLUAP1 | Clusterin-associated protein 1 | 395 | 371 | 194 | GABPB2 | GA-binding protein transcription factor |
| 2022 | 2084 | 2022 | F2R | Thrombin receptor | 387 | 438 | 362 | SHCBP1 | Associated with intracellular signalling |
| 1464 | 1464 | 1387 | C19orf31 | 383 | 352 | 200 | SLC44A4 | Solute carrier | |
| 1310 | 1310 | 1172 | FARSLB | Phenylalanyl-tRNA synthetase, | 367 | 464 | 328 | MSH3 | Component of the DNA mismatch repair system |
| 1172 | 1172 | 1387 | NAG18 | 366 | 444 | 217 | MGC16703 | ||
| 985 | 971 | 965 | ITIH5 | Inter- | 364 | 362 | 188 | C21orf55 | |
| 971 | 968 | 955 | ROCK2 | Rho kinase 2 | 336 | 309 | 66 | PNPT1 | Polynucleotide phosphorylase 1 |
| 955 | 971 | 874 | LILRB3 | Leukocyte immunoglobulin-like receptor 3 | 330 | 304 | 76 | IL18 | Interleukin 18 |
| 929 | 929 | 955 | ORC6 L | Origin recognition complex subunit 6 | 325 | 327 | 51 | RPL7L1 | Ribosomal protein |
| 743 | 740 | 683 | LOC400721 | 318 | 103 | 659 | FGA | Processes fibrin | |
| 708 | 740 | 616 | KIAA0101 | Associated with proliferating cell nuclear antigen | 312 | 273 | 53 | LOC729603 | Calcium binding |
| 680 | 631 | 631 | CCR6 | Chemokine receptor 6 | 291 | 357 | 170 | CREB1 | cAMP response element-binding protein |
| 648 | 648 | 521 | AKR1D1 | Aldo-keto reductase family 1, member D1 | 282 | 295 | 50 | GJC1 | Gap junction protein |
| 599 | 580 | 548 | LOC389517 | Pseudogene | 281 | 359 | 73 | PDCD7 | Promoter of apoptosis |
| 529 | 463 | 180 | FAM177A1 | 255 | 311 | 51 | LOC642947 | ||
| 485 | 504 | 466 | PDE4C | Phosphodiesterase 4C | 255 | 277 | 47 | FKTN | Fukutin |
| 475 | 570 | 537 | RN7SL1 | Cytoplasmic ribonucleoprotein complex | 230 | 253 | 59 | LILRB1 | Leukocyte immunoglobulin-like receptor 1 |
| 453 | 399 | 337 | AIRE | Involved in self tolerance and autoimmunity | 200 | 251 | 47 | SLC16A12 | Solute carrier |
Abbreviations: CON=control; CPM=Cyclophosphamide; OXP=oxaliplatin.
Spot-intensity signals from the CON samples were ranked according to their magnitudes, and those with values lower than that of the background/baseline (60) were defined as absent and excluded. There were just 92 genes passing these criteria, of which the top 40 are presented. The fates of the expressions of these genes in microvesicles from CPM- or OXP-treated samples were also assessed. Data were generated from two biological replicates.
Identifying genes specific to OXP
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| RPL7L1 | Ribosomal protein | 325 | 327 | 51 | 1.00 | 0.16 |
| GJC1 | Gap junction protein | 282 | 295 | 50 | 1.04 | 0.18 |
| FKTN | Fukutin | 255 | 277 | 47 | 1.09 | 0.19 |
| PNPT1 | Polynucleotide phosphorylase 1 | 336 | 309 | 66 | 0.92 | 0.20 |
| IL18 | Supports NK action and stimulates the production of IFN | 330 | 304 | 76 | 0.92 | 0.23 |
| LILRB1 | Leukocyte immunoglobulin-like receptor 1 | 230 | 253 | 59 | 1.1 | 0.26 |
| GABPB2 | GA-binding protein transcription factor | 395 | 371 | 194 | 0.94 | 0.49 |
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| MAP4K4 | MAPK member that has a role in the response to stress and cytokines | 50 | 52 | 100 | 1.0 | 2.0 |
| RHBDF2 | Rhomboid-like protein | 48 | 48 | 143 | 1.0 | 3.0 |
| KRIT1 | Ankyrin repeat-containing proteins involved with cytoskeletal processes | 63 | 68 | 196 | 1.1 | 3.1 |
| BCL7C | May be involved in anti-apoptotic responses | 54 | 49 | 180 | 0.90 | 3.3 |
| ABCA4 | ATP-binding cassette | 54 | 52 | 204 | 0.98 | 3.8 |
| MAP1A | Microtubule protein involved with cytoskeletal re-arrangements | 72 | 69 | 371 | 0.96 | 5.1 |
Abbreviations: BCL7C=B-Cell lymphoma 7C; CON=control; CPM=Cyclophosphamide; OXP=oxaliplatin.
Genes were filtered according to the criteria that expressions be (i) <10% different between untreated and CPM-treated, and (ii) >1-fold change in either direction between untreated and OXP-treated. This was done to generate a list of genes whose expressions were altered by treatment with OXP, but not by CPM. The ratios of expressions in CPM/control (CON) and OXP/CON are also shown. Data were generated from two biological replicates.