| Literature DB >> 22291965 |
Claudia Sola1, Hugo Paganini, Ana L Egea, Alejandro J Moyano, Analia Garnero, Ines Kevric, Catalina Culasso, Ana Vindel, Horacio Lopardo, José L Bocco.
Abstract
BACKGROUND: Community-associated methicillin-resistant Staphylococcus aureus-(CA-MRSA) strains have emerged in Argentina. We investigated the clinical and molecular evolution of community-onset MRSA infections (CO-MRSA) in children of Córdoba, Argentina, 2005-2008. Additionally, data from 2007 were compared with the epidemiology of these infections in other regions of the country. METHODOLOGY/PRINCIPALEntities:
Mesh:
Substances:
Year: 2012 PMID: 22291965 PMCID: PMC3264586 DOI: 10.1371/journal.pone.0030487
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Evolution of community-associated Staphylococcus aureus infections from children in Cordoba-Argentina, 2003–2008.
Evolution of the rates of all community-associated Staphylococcus aureus infections: i) methicillin-resistant S. aureus (CA-MRSA) infections [total (squares) and invasive-INVI (circles)], and ii) total methicillin-susceptible S. aureus (CA-MSSA) infections (triangles) in Córdoba children's hospitals, [H1 (CBAH1): 2003–2008: filled figures, and in H1, H2 and H3 (CBAH1-3): 2005 vs 2007–2008: empty figures] iii) methicillin-resistant community-associated Staphylococcus aureus infections caused by the ST5-IV-PVL+clone [total (gray squares) and invasive (INVI) (gray circles)] in H1 (CBAH1): 2003–2008.
Characteristics, incidence of CA-MRSA infections and location of children's hospitals of northern, eastern and central of Argentina, 2007.
| Children's Hospitals | Province | Number of beds | Annual admission | Annual visits | Number of CA-MRSA | Incidence |
| H1 | Córdoba | 230 | 10,375 | 119,365 | 16 | 13.4 |
| H2 | Córdoba | 75 | 3,083 | 123,000 | 10 | 8.1 |
| H3 | Córdoba | 70 | 1,775 | 107,000 | 10 | 9.3 |
| H4 | Santa Fe | 96 | 8,000 | 220,000 | 29 | 13.2 |
| H5 | Buenos Aires | 274 | 6,756 | 202,000 | 14 | 6.9 |
| H6 | Buenos Aires city surrounding areas | 142 | 7,539 | 264,938 | 33 | 12.5 |
| H7 | Santa Fe | 178 | 13,169 | 175,683 | 48 | 27.3 |
| H8 | Autonomous city of Buenos Aires | 485 | 18,427 | 296,452 | 53 | 17.9 |
| H9 | Autonomous city of Buenos Aires | 228 | 8,917 | 252,083 | 42 | 16.7 |
| H10 | Corrientes | 152 | 8,707 | 181,671 | 28 | 15.4 |
| H11 | Chaco | 78 | 3,273 | 214,091 | 24 | 11.2 |
Number of all CA-MRSA isolates detected in the three Cordoba children's hospitals during 2007 and those recovered in each hospital from the surveillance study for community onset S. aureus infections in children from Argentina-(CSACHARG) [16].
annual visits: include outpatient facility and emergency service.
Incidence: Number of cases/100,000 annual visits.
Demographic and clinical characteristics of children with Community-onset methicillin resistant S. aureus infections in central, northern and eastern regions of Argentina.
| Characteristics | CA-MRSA CBAH1-H3 | CA-MRSA CSACHARG |
| CA-MRSA Total CBAH1-H3 | HACO-MRSA CSACHARG |
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| Period | 2007–2008 | 2007 | 2007 | |||
| n(%), [n] | n: 99(%), [n]: 5 | n: 213(%), [n]: 25 | n: 312(%), [n]: 30 | n: 51(%), [n]: 4 | ||
| Age, median of years (range) | 6.1 (0.24–18) | 3.4 (0.08–16) | 4.1 (0.08–18) | 3.2 (0.08–18) | ||
| Sex (males) | 61(61) | 128(60) | 0.93 | 189(60) | 30(59) | 0.88 |
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| 72(73) | 136(64) | 0.11 | 209(67) | 6(12) | <0.001 |
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| 1(1) | - | 1(0.5) | - | ||
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| - | - | - | 12(23) | ||
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| 16(16), [2] | 32(15), [11] | 0.26 | 48(15), [13] | 6(12), [2] | 0.5 |
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| 11(11), [2] | 17(8), [10] | 28(9), [12] | 5(10), [1] | ||
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| 5(5) | 13(6) | 18(5.5) | - | ||
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| - | 2(1), [1] | 2(0.5), [1] | 1(2), [1] | ||
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| 5(5), [1] | 23(11), [7] | 0.09 | 28(9), [8] | 9(17), [1] | 0.06 |
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| 5(5), [1] | 11(5), [2] | 16(5), [3] | 6(12), [1] | ||
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| - | 12(6), [5] | 12(4), [5] | 3(6) | ||
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| 2(2) | 15(7) | 0.06 | 17(5.5) | 12(23) | <0.001 |
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| 1(1), [1] | 1(0.5), [5] | 2(0.5), [6] | [1] | ||
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| - | 1(0.5) | 1(0.5) | - | ||
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| [1] | 4 (1.5), [1] | 4(1), [2] | 2(4) | ||
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| 2(2) | 1(0.5) | 3(1) | 1(2) | ||
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| - | [1] | [1] | 3(6) | ||
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| 27(27) | 77(36) | 0.12 | 104(33) | 33(65) | <0.001 |
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| 11(11) | 29(13) | 0.38 | 40(13) | 14(27) | 0.008 |
CA-MRSA: Community-associated methicillin resistant Staphylococcus aureus, HACO-MRSA: Healthcare-associated community-onset methicillin resistant Staphylococcus aureus infections.
CBAH1-H3: Prospective surveillance of CO-S. aureus infections in children from three children's hospitals of Córdoba (CBAH1, CBAH2 and CBAH3), 2007 and 2008.
CSACHARG: Prospective surveillance of CO-S. aureus infections in children from Argentina, 2007 [16].
P values are based on chi-square test or Fisher's exact test, as appropriate, for CA-MRSA,CBAH1-H3 vs. CA-MRSA, CSACHARG and total CA-MRSA vs. HACO-MRSA comparisons by each of categorical variables (males and infection type); p<0.05 was considered statistically significant.
Values are number of patients and the percentages are indicated in parentheses. [n]: number of patients with this secondary infection focus (CA-MRSA: 342 infections in 312 patients).
Abscess and cellulites: include 9 cases of impetigo(1 from CBAH1-H3 and 8 cases from CSACHARG).
Deep abscess included: breast (2 cases), psoas (4 cases), liver and renal (1 case each one) abscesses.
Characteristics of MRSA clones isolated from children with community onset MRSA infections (CO-MRSA), Argentina.
| Related to Pediatric clone | Southwest Pacific (SWP) clone | South American USA300 clone | Cordobes/Chilean clone | Brazilian clone | |||
| Clone | CA-MRSA clone | HA-MRSA clone | |||||
| n: 285 | n: 10 | n: 39 | n: 4 | n: 12 | n: 3 | ||
| Molecular characteristics | |||||||
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| 2 | 2 | 3 | 1 | 2 | 1 | |
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| ST5: 283 (99); ST1524:2 (1) | ST100: 10 (100) | ST30: 35 (90); ST196: 4 (10) | ST8: 4 (100) | ST5: 12 (100) | ST239: 3 (100) | |
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| 5 | 5 | 30 | 8 | 5 | 8 | |
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| IV(2B): IVa: 275 (96), IVc: 6 (2), IVNT | IVNv: 10 (100) | IV(2B): IVc: 38 (97), IVa: 1 (3) | IV(2B): IVc: 3 (75), IVa: 1 (25) | I | IIIA | |
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| I | C | N | USA300 | A | B | |
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| PVL+ 259 (91) | PVL− 26 (9) | PVL−10 (100) | PVL+ 39 (100) | PVL+ 4 (100) | PVL−12 (100) | PVL−3 (100) |
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| I-1: 202 (71) and 14 minor subtypes | I-2: 7 (2.5) and 12 minor subtypes | C1: 2 (20) and 7 minor subtype | N4: 26 (67) and 3 minor subtypes | USA300, 4 subtypes | A1: 4 (33) and 8 minor subtypes | B15 2 (66) and 1 subtype |
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| t311: 259 (100) | t002: 22 (85); t311, t045; t067; t1094 | t002: 10 (100) | t019: 29 (72); t021: 5 (13); t6653: 4 (10); t975 | t008: 4 (100) | t149: 12 (100) | t037: 3 (100) |
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| ERY(14)CLINi (14)GEN (8)RIF (1)CHL (1) | GEN (100)ERY (50)CLINi (10); CLINc (30)RIF (30) | GEN(5)ERY(18)CLINi (18)CHL(3) | GEN(25) | GEN (92)CIP (75)ERY(92)CLIc (92)RIF (17) | GEN (100)CIP (100)ERY (100)CLI (100)RIF(6)CHL (100)SXT (100) | |
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| ST188/CC1, n: 2 | PFGE type T1, SCC | ||||||
| ST917/CC8, n: 4 | PFGE type R1, SCC | ||||||
| ST207/CC509, n:3 | PFGE type Y1, SCC | ||||||
| ST918/Singleton, n:1 | PFGE type S1, SCC | ||||||
agr type, type of accessory gene regulator, ST: Sequence Type, SCCmec: Staphylococcal Cassette Chromosome mec, PFGE, Pulsed Field Gel Electrophoresis; RIDOM spa type: staphylococcal protein A (spa) type assigned through the RIDOM databases (http://spaserver.ridom.de).
n (%), total number and % of strains with this molecular characteristic [PFGE subtype (only those more frequent are indicated) or ST or spa type or SCCmec type]. % is not expressed when only one isolate with this characteristic was detected.
pvl, Panton-Valentine leukocidin genes (lukS-PV-lukF-PV); indicated as number and % of isolates harboring (PVl+) or not (PVL−) pvl genes.
virulence genes profile: From all virulence genes analyzed, only those detected are indicated (number and % of positive isolates is expressed when not all isolates harbor this virulence factor).
Drug resistance to non-β-Lactams (%), is indicated as follows: Gentamicin (GEN), Ciprofloxacin (CIP), Erythromycin (ERY), Clindamycin (CLIc and CLIi: constitutive and inducible resistance to macrolides, lincosamide and streptogramine B, respectively), rifampin (RIF), chloramphenicol (CHL), trimethoprim/sulfamethoxazole (SXT) and minocycline (MIN) (%) of strains resistant to these antibiotics within each pulsotype is indicated when more than one isolate was detected. h-VISA (1): means one isolate belonging to this clone with phenotype h-VISA.
IV NT: SCCmec type IV non typable.
Vr: SCCmec related to V.
Genotypes of methicillin resistant S. aureus (MRSA) isolates recovered from children with Community-onset infections (invasive and non-invasive) in central, northen and eastern regions of Argentina, by epidemiologic case classification.
| Community onset (CO), N° (%) of cases & N° (%) of INVI isolates in indicated epidemiologic class | ||||||
| Total CO | Community–Associated (CA) | Healthcare-associated CO (HACO) | ||||
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| CBAH1-H3 | CBAH1-H3 | CSACHARG | Total CA | CSACHARG | |
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| 285 (79); 99 (72) | 57 (90); 14 (82) | 29 (80); 7 (70) | 170 (80);61 (79) | 256 (82);82 (79) | 29 (57);17 (51) |
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| 39 (11), 11 (8) | 3 (5), 2 (12) | 3 (8); 1 (10) | 30 (14); 7 (9) | 36 (11.5); 10(10) | 3 (6); 1 (3) |
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| 4 (1); 3 (2) | 2 (3); 1 (6) | 1 (3);1 (10) | 1 (0.5), 1 (1) | 4 (1), 3 (3) | — |
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| 10 (3); 6 (4) | — | 1 (3); — | 4 (2); 2 (2.5) | 5 (2); 2 (2) | 5 (10); 4 (12) |
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| 12 (3); 10 (7) | — | 1 (3); 1 (10) | — | 1 (0.5); 1 (1) | 11 (21); 9 (27) |
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| 3 (1); 2 (1.5) | — | — | — | — | 3 (6); 2 (6) |
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| 10 (2) | 1 (2) | 1 (3) | 8 (3.5) | 10 (3) | — |
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| n: 363 & INVI: 137 | n: 63 & INVI: 17 | n: 36 & INVI: 10 | n: 213 & INVI: 77 | n: 312 & INVI: 104 | n: 51 & INVI: 33 |
INVI: Invasive infections.
CBAH1-H3: Prospective surveillance of CO-S. aureus infections in children from three children's hospitals of Córdoba (CBAH1, CBAH2 and CBAH3) 2007 and 2008.
CSACHARG and: Prospective surveillance of CO-S. aureus infections in children from Argentina, 2007 [16].
Genotypes are denoted as: type (by PFGE)-Sequence Type (ST by MLST)-SCCmec type.
Figure 2Molecular characteristics and proportion from different regions of Argentina of dominant community methicillin-resistant-Staphylococcus aureus clones.
A. PFGE pattern analysis for representative isolates belonging to the most prevalent subtypes of community-onset-MRSA clones (CA-MRSA and HA-MRSA) detected in central, eastern and northern regions of Argentina during 2007–2008. The schematic presentation of SmaI restriction patterns (middle) and dendrogram (left) by the unweighted-pair group method using average linkage clusterings are shown. Genotypes are denoted as subtype (by PFGE)-ST (by MLST)-SCCmec type-spa type (right). CA-MRSA clones appear in gray. The presence (+) or absence (−) of pvl genes (by PCR) is also indicated for each subtype; strains with and other without pvl genes belonging to the same PFGE subtype (I9) are indicated as +/−. The PFGE pattern of USA300-0114 (ST8-IVa-t008-ACME+) is shown for comparison purposes. The first (A1-ST5-I-t149-Cordobes/Chilean), second (B1-ST239-IIIA-t037-Brazilian) and third (C1-ST100-IVNv-t002-Pediatric) more frequent HA-MRSA clones in our country, detected among community-onset MRSA infections, are also shown (dotted gray). B: Proportion of CA-MRSA clones among representative isolates from different regions of Argentina in 2007.