Literature DB >> 22289181

N-acetyl lysyl-tRNA synthetases evolved by a CcdB-based selection possess N-acetyl lysine specificity in vitro and in vivo.

Takuya Umehara1, Jihyo Kim, Sangsik Lee, Li-Tao Guo, Dieter Söll, Hee-Sung Park.   

Abstract

Posttranslational modifications play a crucial role in modulating protein structure and function. Genetic incorporation of unnatural amino acids into a specific site of a protein facilitates the systematic study of protein modifications including acetylation. We here report the directed evolution of pyrrolysyl-tRNA synthetase (PylRS) from Methanosarcina mazei to create N-acetyl lysyl-tRNA synthetases (AcKRSs) using a new selection system based on the killing activity of the toxic ccdB gene product. The amino acid specificity of these and of published AckRSs was tested in vitro and in vivo, and the enzyme-kinetic properties of the AckRSs were evaluated for the first time. Copyright Â
© 2012 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22289181     DOI: 10.1016/j.febslet.2012.01.029

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  40 in total

1.  Pyrrolysyl-tRNA synthetase variants reveal ancestral aminoacylation function.

Authors:  Jae-hyeong Ko; Yane-Shih Wang; Akiyoshi Nakamura; Li-Tao Guo; Dieter Söll; Takuya Umehara
Journal:  FEBS Lett       Date:  2013-08-28       Impact factor: 4.124

2.  Engineered Aminoacyl-tRNA Synthetases with Improved Selectivity toward Noncanonical Amino Acids.

Authors:  Hui Si Kwok; Oscar Vargas-Rodriguez; Sergey V Melnikov; Dieter Söll
Journal:  ACS Chem Biol       Date:  2019-04-09       Impact factor: 5.100

3.  Genetically Incorporating Two Distinct Post-translational Modifications into One Protein Simultaneously.

Authors:  Sumana Venkat; Jourdan Sturges; Alleigh Stahman; Caroline Gregory; Qinglei Gan; Chenguang Fan
Journal:  ACS Synth Biol       Date:  2018-01-17       Impact factor: 5.110

Review 4.  Pyrrolysyl-tRNA synthetase: an ordinary enzyme but an outstanding genetic code expansion tool.

Authors:  Wei Wan; Jeffery M Tharp; Wenshe R Liu
Journal:  Biochim Biophys Acta       Date:  2014-03-12

5.  Catalyst-free and site-specific one-pot dual-labeling of a protein directed by two genetically incorporated noncanonical amino acids.

Authors:  Bo Wu; Zhiyong Wang; Ying Huang; Wenshe R Liu
Journal:  Chembiochem       Date:  2012-05-24       Impact factor: 3.164

6.  Translation system engineering in Escherichia coli enhances non-canonical amino acid incorporation into proteins.

Authors:  Rui Gan; Jessica G Perez; Erik D Carlson; Ioanna Ntai; Farren J Isaacs; Neil L Kelleher; Michael C Jewett
Journal:  Biotechnol Bioeng       Date:  2017-02-02       Impact factor: 4.530

7.  Near-cognate suppression of amber, opal and quadruplet codons competes with aminoacyl-tRNAPyl for genetic code expansion.

Authors:  Patrick O'Donoghue; Laure Prat; Ilka U Heinemann; Jiqiang Ling; Keturah Odoi; Wenshe R Liu; Dieter Söll
Journal:  FEBS Lett       Date:  2012-10-01       Impact factor: 4.124

8.  Upgrading protein synthesis for synthetic biology.

Authors:  Patrick O'Donoghue; Jiqiang Ling; Yane-Shih Wang; Dieter Söll
Journal:  Nat Chem Biol       Date:  2013-10       Impact factor: 15.040

9.  A facile strategy for selective incorporation of phosphoserine into histones.

Authors:  Sangsik Lee; Seunghee Oh; Aerin Yang; Jihyo Kim; Dieter Söll; Daeyoup Lee; Hee-Sung Park
Journal:  Angew Chem Int Ed Engl       Date:  2013-03-26       Impact factor: 15.336

10.  Evolution of translation machinery in recoded bacteria enables multi-site incorporation of nonstandard amino acids.

Authors:  Miriam Amiram; Adrian D Haimovich; Chenguang Fan; Yane-Shih Wang; Hans-Rudolf Aerni; Ioanna Ntai; Daniel W Moonan; Natalie J Ma; Alexis J Rovner; Seok Hoon Hong; Neil L Kelleher; Andrew L Goodman; Michael C Jewett; Dieter Söll; Jesse Rinehart; Farren J Isaacs
Journal:  Nat Biotechnol       Date:  2015-11-16       Impact factor: 54.908

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