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Literature DB >> 22286984

Functional cloning and characterization of antibiotic resistance genes from the chicken gut microbiome.

Abstract

Culture-independent sampling in conjunction with a functional cloning approach identified diverse antibiotic resistance genes for different classes of antibiotics in gut microbiomes from both conventionally raised and free-range chickens. Many of the genes are phylogenetically distant from known resistance genes. Two unique genes that conferred ampicillin and spectinomycin resistance were also functional in Campylobacter, a distant relative of the Escherichia coli host used to generate the genomic libraries.

Entities: Chemical Species

Mesh：

Substances：
DNA, Bacterial

Year: 2012 PMID： 22286984 PMCID： PMC3318844 DOI： 10.1128/AEM.06920-11

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

31 in total

1. Metagenomic analysis of apple orchard soil reveals antibiotic resistance genes encoding predicted bifunctional proteins.

Authors: Justin J Donato; Luke A Moe; Brandon J Converse; Keith D Smart; Flora C Berklein; Patricia S McManus; Jo Handelsman
Journal: Appl Environ Microbiol Date: 2010-05-07 Impact factor: 4.792

2. A human gut microbial gene catalogue established by metagenomic sequencing.

Authors: Junjie Qin; Ruiqiang Li; Jeroen Raes; Manimozhiyan Arumugam; Kristoffer Solvsten Burgdorf; Chaysavanh Manichanh; Trine Nielsen; Nicolas Pons; Florence Levenez; Takuji Yamada; Daniel R Mende; Junhua Li; Junming Xu; Shaochuan Li; Dongfang Li; Jianjun Cao; Bo Wang; Huiqing Liang; Huisong Zheng; Yinlong Xie; Julien Tap; Patricia Lepage; Marcelo Bertalan; Jean-Michel Batto; Torben Hansen; Denis Le Paslier; Allan Linneberg; H Bjørn Nielsen; Eric Pelletier; Pierre Renault; Thomas Sicheritz-Ponten; Keith Turner; Hongmei Zhu; Chang Yu; Shengting Li; Min Jian; Yan Zhou; Yingrui Li; Xiuqing Zhang; Songgang Li; Nan Qin; Huanming Yang; Jian Wang; Søren Brunak; Joel Doré; Francisco Guarner; Karsten Kristiansen; Oluf Pedersen; Julian Parkhill; Jean Weissenbach; Peer Bork; S Dusko Ehrlich; Jun Wang
Journal: Nature Date: 2010-03-04 Impact factor: 49.962

3. Antibiotic resistance is ancient.

Authors: Vanessa M D'Costa; Christine E King; Lindsay Kalan; Mariya Morar; Wilson W L Sung; Carsten Schwarz; Duane Froese; Grant Zazula; Fabrice Calmels; Regis Debruyne; G Brian Golding; Hendrik N Poinar; Gerard D Wright
Journal: Nature Date: 2011-08-31 Impact factor: 49.962

4. Prevalence of the bla (SHV) gene in Klebsiella pneumoniae isolates obtained from hospital and community infections and from the microbiota of healthy individuals in Recife, Brazil.

Authors: Dyana Leal Veras; Luiz Carlos Alves; Fábio André Brayner; Duschinka Ribeiro Duarte Guedes; Maria Amélia Vieira Maciel; Cíntia Renata Costa Rocha; Ana Catarina de Souza Lopes
Journal: Curr Microbiol Date: 2011-02-27 Impact factor: 2.188

5. Functional characterization of the antibiotic resistance reservoir in the human microflora.

Authors: Morten O A Sommer; Gautam Dantas; George M Church
Journal: Science Date: 2009-08-28 Impact factor: 47.728

Review 6. Antimicrobial resistance in selected bacteria from poultry.

Authors: Carlton L Gyles
Journal: Anim Health Res Rev Date: 2008-12 Impact factor: 2.615

7. Systematic identification of genetic loci required for polymyxin resistance in Campylobacter jejuni using an efficient in vivo transposon mutagenesis system.

Authors: Jun Lin; Ying Wang; Ky Van Hoang
Journal: Foodborne Pathog Dis Date: 2009-03 Impact factor: 3.171

8. Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil.

Authors: Heather K Allen; Luke A Moe; Jitsupang Rodbumrer; Andra Gaarder; Jo Handelsman
Journal: ISME J Date: 2008-10-09 Impact factor: 10.302

9. Molecular, antigenic, and functional characteristics of ferric enterobactin receptor CfrA in Campylobacter jejuni.

Authors: Ximin Zeng; Fuzhou Xu; Jun Lin
Journal: Infect Immun Date: 2009-09-08 Impact factor: 3.441

10. Beta-lactamase-mediated beta-lactam resistance in Campylobacter species: prevalence of Cj0299 (bla OXA-61) and evidence for a novel beta-Lactamase in C. jejuni.

Authors: Deborah J Griggs; Leanne Peake; Margaret M Johnson; Saba Ghori; A Mott; Laura J V Piddock
Journal: Antimicrob Agents Chemother Date: 2009-06-08 Impact factor: 5.191

18 in total

1. Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization.

Authors: Nikolina Udikovic-Kolic; Fabienne Wichmann; Nichole A Broderick; Jo Handelsman
Journal: Proc Natl Acad Sci U S A Date: 2014-10-06 Impact factor: 11.205

2. Diverse antibiotic resistance genes in dairy cow manure.

Authors: Fabienne Wichmann; Nikolina Udikovic-Kolic; Sheila Andrew; Jo Handelsman
Journal: MBio Date: 2014-04-22 Impact factor: 7.867

Review 3. Learning from agriculture: understanding low-dose antimicrobials as drivers of resistome expansion.

Authors: Yaqi You; Ellen K Silbergeld
Journal: Front Microbiol Date: 2014-06-10 Impact factor: 5.640

4. Function and Regulation of the C4-Dicarboxylate Transporters in Campylobacter jejuni.

Authors: Marc M S M Wösten; Chris H A van de Lest; Linda van Dijk; Jos P M van Putten
Journal: Front Microbiol Date: 2017-02-07 Impact factor: 5.640

5. FARME DB: a functional antibiotic resistance element database.

Authors: James C Wallace; Jesse A Port; Marissa N Smith; Elaine M Faustman
Journal: Database (Oxford) Date: 2017-01-10 Impact factor: 3.451

6. Antibiotic-mediated changes in the fecal microbiome of broiler chickens define the incidence of antibiotic resistance genes.

Authors: Wenguang Xiong; Yulin Wang; Yongxue Sun; Liping Ma; Qinglin Zeng; Xiaotao Jiang; Andong Li; Zhenling Zeng; Tong Zhang
Journal: Microbiome Date: 2018-02-13 Impact factor: 14.650