Literature DB >> 22278239

Roles of the coding and noncoding regions of rift valley Fever virus RNA genome segments in viral RNA packaging.

Shin Murakami1, Kaori Terasaki, Krishna Narayanan, Shinji Makino.   

Abstract

We characterized the RNA elements involved in the packaging of Rift Valley fever virus RNA genome segments, L, M, and S. The 5'-terminal 25 nucleotides of each RNA segment were equally competent for RNA packaging and carried an RNA packaging signal, which overlapped with the RNA replication signal. Only the deletion mutants of L RNA, but not full-length L RNA, were efficiently packaged, implying the possible requirement of RNA compaction for L RNA packaging.

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Year:  2012        PMID: 22278239      PMCID: PMC3302519          DOI: 10.1128/JVI.06700-11

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  27 in total

1.  Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions.

Authors:  Ken Fujii; Yutaka Fujii; Takeshi Noda; Yukiko Muramoto; Tokiko Watanabe; Ayato Takada; Hideo Goto; Taisuke Horimoto; Yoshihiro Kawaoka
Journal:  J Virol       Date:  2005-03       Impact factor: 5.103

2.  Rift valley fever virus nonstructural protein NSs promotes viral RNA replication and transcription in a minigenome system.

Authors:  Tetsuro Ikegami; C J Peters; Shinji Makino
Journal:  J Virol       Date:  2005-05       Impact factor: 5.103

3.  Rift Valley fever virus NSs mRNA is transcribed from an incoming anti-viral-sense S RNA segment.

Authors:  Tetsuro Ikegami; Sungyong Won; C J Peters; Shinji Makino
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103

4.  cis-Acting packaging signals in the influenza virus PB1, PB2, and PA genomic RNA segments.

Authors:  Yuying Liang; Ying Hong; Tristram G Parslow
Journal:  J Virol       Date:  2005-08       Impact factor: 5.103

5.  Characterization of wild-type and alternate transcription termination signals in the Rift Valley fever virus genome.

Authors:  Estelle Lara; Agnès Billecocq; Psylvia Leger; Michèle Bouloy
Journal:  J Virol       Date:  2011-09-14       Impact factor: 5.103

6.  Promoter analysis of influenza virus RNA polymerase.

Authors:  J D Parvin; P Palese; A Honda; A Ishihama; M Krystal
Journal:  J Virol       Date:  1989-12       Impact factor: 5.103

7.  Attenuation of bunyavirus replication by rearrangement of viral coding and noncoding sequences.

Authors:  Anice C Lowen; Amanda Boyd; John K Fazakerley; Richard M Elliott
Journal:  J Virol       Date:  2005-06       Impact factor: 5.103

8.  Selective incorporation of influenza virus RNA segments into virions.

Authors:  Yutaka Fujii; Hideo Goto; Tokiko Watanabe; Tetsuya Yoshida; Yoshihiro Kawaoka
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-06       Impact factor: 11.205

9.  Generation of bovine respiratory syncytial virus (BRSV) from cDNA: BRSV NS2 is not essential for virus replication in tissue culture, and the human RSV leader region acts as a functional BRSV genome promoter.

Authors:  U J Buchholz; S Finke; K K Conzelmann
Journal:  J Virol       Date:  1999-01       Impact factor: 5.103

10.  Functional analysis of the noncoding regions of the Uukuniemi virus (Bunyaviridae) RNA segments.

Authors:  Kirsten Flick; Anna Katz; Anna Overby; Heinz Feldmann; Ralf F Pettersson; Ramon Flick
Journal:  J Virol       Date:  2004-11       Impact factor: 5.103

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  13 in total

1.  Middle East Respiratory Syndrome Coronavirus nsp1 Inhibits Host Gene Expression by Selectively Targeting mRNAs Transcribed in the Nucleus while Sparing mRNAs of Cytoplasmic Origin.

Authors:  Kumari G Lokugamage; Krishna Narayanan; Keisuke Nakagawa; Kaori Terasaki; Sydney I Ramirez; Chien-Te K Tseng; Shinji Makino
Journal:  J Virol       Date:  2015-08-26       Impact factor: 5.103

Review 2.  Molecular aspects of Rift Valley fever virus and the emergence of reassortants.

Authors:  Natasha N Gaudreault; Sabarish V Indran; Velmurugan Balaraman; William C Wilson; Juergen A Richt
Journal:  Virus Genes       Date:  2018-11-13       Impact factor: 2.332

Review 3.  Molecular biology and genetic diversity of Rift Valley fever virus.

Authors:  Tetsuro Ikegami
Journal:  Antiviral Res       Date:  2012-06-16       Impact factor: 5.970

4.  A strand-specific real-time quantitative RT-PCR assay for distinguishing the genomic and antigenomic RNAs of Rift Valley fever phlebovirus.

Authors:  Breanna Tercero; Kaori Terasaki; Keisuke Nakagawa; Krishna Narayanan; Shinji Makino
Journal:  J Virol Methods       Date:  2019-07-14       Impact factor: 2.014

5.  Creation of Rift Valley fever viruses with four-segmented genomes reveals flexibility in bunyavirus genome packaging.

Authors:  Paul J Wichgers Schreur; Nadia Oreshkova; Rob J M Moormann; Jeroen Kortekaas
Journal:  J Virol       Date:  2014-07-09       Impact factor: 5.103

6.  Encapsidation of Host RNAs by Cucumber Necrosis Virus Coat Protein during both Agroinfiltration and Infection.

Authors:  Kankana Ghoshal; Jane Theilmann; Ron Reade; Ajay Maghodia; D'Ann Rochon
Journal:  J Virol       Date:  2015-08-12       Impact factor: 5.103

7.  Characterization of the Molecular Interactions That Govern the Packaging of Viral RNA Segments into Rift Valley Fever Phlebovirus Particles.

Authors:  Breanna Tercero; Krishna Narayanan; Kaori Terasaki; Shinji Makino
Journal:  J Virol       Date:  2021-06-24       Impact factor: 5.103

8.  Modeling Effects of RNA on Capsid Assembly Pathways via Coarse-Grained Stochastic Simulation.

Authors:  Gregory R Smith; Lu Xie; Russell Schwartz
Journal:  PLoS One       Date:  2016-05-31       Impact factor: 3.240

9.  The consequences of reconfiguring the ambisense S genome segment of Rift Valley fever virus on viral replication in mammalian and mosquito cells and for genome packaging.

Authors:  Benjamin Brennan; Stephen R Welch; Richard M Elliott
Journal:  PLoS Pathog       Date:  2014-02-13       Impact factor: 6.823

Review 10.  RNA Encapsidation and Packaging in the Phleboviruses.

Authors:  Katherine E Hornak; Jean-Marc Lanchy; J Stephen Lodmell
Journal:  Viruses       Date:  2016-07-15       Impact factor: 5.048

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