| Literature DB >> 22276682 |
Hong-Juan Peng1, Hui-Bing Lai, Qiao-Li Zhang, Ba-Yi Xu, Hao Zhang, Wen-Hua Liu, Wei Zhao, Yuan-Ping Zhou, Xin-Guang Zhong, Shu Jiang, Jin-Hua Duan, Gui-Yun Yan, Jian-Feng He, Xiao-Guang Chen.
Abstract
BACKGROUND: Dengue, a mosquito-borne febrile viral disease, is found in tropical and sub-tropical regions around the world. Since the first occurrence of dengue was confirmed in Guangdong, China in 1978, dengue outbreaks have been reported sequentially in different provinces in South China transmitted by peridomestic Ae. albopictus mosquitoes, diplaying Ae. aegypti, a fully domestic vector that transmits dengue worldwide. Rapid and uncontrolled urbanization is a characteristic change in developing countries, which impacts greatly on vector habitat, human lifestyle and transmission dynamics on dengue epidemics. In September 2010, an outbreak of dengue was detected in Dongguan, a city in Guangdong province characterized by its fast urbanization. An investigation was initiated to identify the cause, to describe the epidemical characteristics of the outbreak, and to implement control measures to stop the outbreak. This is the first report of dengue outbreak in Dongguan, even though dengue cases were documented before in this city.Entities:
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Year: 2012 PMID: 22276682 PMCID: PMC3311058 DOI: 10.1186/1471-2458-12-83
Source DB: PubMed Journal: BMC Public Health ISSN: 1471-2458 Impact factor: 3.295
Real-time PCR primers and probe for dengue virus cDNA identification*
| Primers/probe | Sequence (5'-3') | Working concentration | Length of amplified fragment (bp) | Type specificity |
|---|---|---|---|---|
| Den-FP | GCATATTGACGCTGGGAGAGA | 0.5 μM | 68 | Universal for all four types |
| Den-RP | GGCGTTCTGTGCCTGGAAT | 0.5 μM | ||
| Den-probe | 0.25 μM | |||
| Real-time PCR program | Pre-denature at 95°C for 45 s, denature at 95°C for 20 s, annealing at 65°C for 20 s, elongation at 72°C for 30 s, 40 cycles, elongation at 72°C for 1 min, keep at 4°C | |||
*From diagnostic criteria for Dengue Fever (DF) (WS216-2008) enacted by the Ministry of Health of People's Republic of China.
Figure 1Number of clinically diagnosed and laboratory confirmed dengue cases at different time points during the dengue outbreak. The outbreak of dengue occurred from July 22, 2010 to September 14, 2010, with a concentrated occurring between Aug 31 and September 14, 2010, which accounted for 80.6% (25/31) of all dengue cases (24 laboratory confirmed and 7 clinically diagnosed cases, and 31 in total)
Symptom composition of 31 Cases of dengue fever patients in Xintang community, Dongguan city
| Symptoms | Number of cases | Proportion (%) | Diagnosis methods |
|---|---|---|---|
| Fever | 27 | 27/31 (87.1) | Clinically and laboratory diagnosed |
| Headache | 30 | 30/31 (96.8) | |
| Rash | 10 | 10/31 (32.2) | |
| Myalgia | 7 | 7/31 (22.6) | |
| Hemorrhage (bleeding spots under the skin) | 5 | 5/31 (16.1) | |
| Arthralgia | 2 | 2/31 (6.5) | |
| Fever + Headache + Rash + Myalgia | 3 | 3/31 (9.68) | |
| leucopenia | 14 | 14/24 (58.3) | Laboratory diagnosed |
| thrombocytopenia | 17 | 17/24 (70.8) | |
Figure 2Molecular Phylogenetic analysis of dengue virus isolates from this study compared with the other established dengue virus based on the alignment of E-protein gene. Phylogenetic analysis were conducted in MEGA5. The evolutionary history was inferred by using the Maximum Likelihood method based on the General Time Reversible model. The bootstrap consensus tree inferred from 1000 replicates is taken to represent the evolutionary history of the dengue virus isolates analyzed. Branches corresponding to partitions reproduced in less than 50% bootstrap replicates are collapsed. The percentage of replicate trees in which the associated dengue virus isolates clustered together in the bootstrap test (1000 replicates) are shown next to the branches. Initial tree(s) for the heuristic search were obtained automatically as follows. When the number of common sites was < 100 or less than one fourth of the total number of sites, the maximum parsimony method was used; otherwise BIONJ method with MCL distance matrix was used. The analysis involved 141 nucleotide sequences. There were a total of 1427 positions in the final dataset. The cDNA of DG2010, D10029-DG and D10030-DG in E-protein region shared 100% identity with each other. The molecular phylogeny analysis result indicated that the D10030-DG isolate has a nearest relationship with DENV1/D10167-GZ/2010 (GenBank: JN029814.1), DENV1/D10102-SZ/2010 (GenBank: JN029813.1), and DENV1/D10007-DG/2010(GenBank: JN029807) (Figure 2), which were isolated in Guangdong in 2010, and didn't cause local outbreak. This cluster is statistically supported (bootstrap value = 96%) and is within a clade contain the sequence DENV1/SG/(EHI)DED142808/2008, isolated in Singapore in 2008 also statistically supported (bootstrap value = 85%)
Figure 3Surveillance of febrile cases in Qifeng clinic during the dengue outbreak. According to the report form Qifeng clinic near Xintang community, the number of the febrile cases peaked between September 12 and September 23, 2010. The febrile cases decreased apparently after September 23, 2010
Figure 4The temporal dynamics of dengue cases and Aedes albopictus prevalence during the dengue outbreak in Dongguan. Since September 10, 2010, measures have been taken to control the mosquitoes, such as cleaning out ponds to minimize breeding places, and spraying insecticides to kill the mosquitoes. The Breteau Index (BI) dropped greatly from 68 on September 10, to 4 on September 15, and 2 on September 19. The BI has been stably maintained at 5 or less since September 19. The dengue case was not reported any more since September 14, 2010