Literature DB >> 22265125

Innovation at the intersection of synthetic and systems biology.

Amanda M Lanza1, Nathan C Crook, Hal S Alper.   

Abstract

The promises of modern biotechnology hinge upon the hope that we can understand microscopic cellular complexity and in doing so create novel function. In this regard, the fields of systems and synthetic biology are important for accelerating both our understanding of biological systems and our ability to quantitatively engineer cells. At the nexus of these two fields is a unique synergy that can help attain these goals. Thus, the next greatest advances in biology and biotechnology are arising at the intersection of the top-down systems approach and the bottom-up synthetic approach. Collectively, these developments enable the precise control of cellular state for systems studies and the discovery of novel parts, control strategies, and interactions for the design of robust synthetic function. This review seeks to highlight this activity as well as provide a perspective for future directions. Combining these efforts can provide novel insights into cellular function and lead to robust, novel synthetic design.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2012        PMID: 22265125     DOI: 10.1016/j.copbio.2011.12.026

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  9 in total

Review 1.  Application of TALEs, CRISPR/Cas and sRNAs as trans-acting regulators in prokaryotes.

Authors:  Matthew F Copeland; Mark C Politz; Brian F Pfleger
Journal:  Curr Opin Biotechnol       Date:  2014-03-12       Impact factor: 9.740

2.  Use of expression-enhancing terminators in Saccharomyces cerevisiae to increase mRNA half-life and improve gene expression control for metabolic engineering applications.

Authors:  Kathleen A Curran; Ashty S Karim; Akash Gupta; Hal S Alper
Journal:  Metab Eng       Date:  2013-07-12       Impact factor: 9.783

Review 3.  Mathematical Modelling in Plant Synthetic Biology.

Authors:  Anna Deneer; Christian Fleck
Journal:  Methods Mol Biol       Date:  2022

4.  Linking yeast Gcn5p catalytic function and gene regulation using a quantitative, graded dominant mutant approach.

Authors:  Amanda M Lanza; John J Blazeck; Nathan C Crook; Hal S Alper
Journal:  PLoS One       Date:  2012-04-27       Impact factor: 3.240

5.  Converting cells into cellular factories.

Authors:  Hal S Alper
Journal:  Comput Struct Biotechnol J       Date:  2012-11-08       Impact factor: 7.271

Review 6.  Synergistic Synthetic Biology: Units in Concert.

Authors:  Jean-Yves Trosset; Pablo Carbonell
Journal:  Front Bioeng Biotechnol       Date:  2013-10-16

7.  A set of synthetic versatile genetic control elements for the efficient expression of genes in Actinobacteria.

Authors:  Lilya Horbal; Theresa Siegl; Andriy Luzhetskyy
Journal:  Sci Rep       Date:  2018-01-11       Impact factor: 4.379

8.  Synthesis and techno-economic assessment of microbial-based processes for terpenes production.

Authors:  Wenzhao Wu; Christos T Maravelias
Journal:  Biotechnol Biofuels       Date:  2018-10-27       Impact factor: 6.040

Review 9.  The (Mathematical) Modeling Process in Biosciences.

Authors:  Nestor V Torres; Guido Santos
Journal:  Front Genet       Date:  2015-12-22       Impact factor: 4.599

  9 in total

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