Literature DB >> 22262535

Modeling the spontaneous Ca2+ oscillations in astrocytes: Inconsistencies and usefulness.

J Riera1, R Hatanaka, T Ozaki, R Kawashima.   

Abstract

Spontaneous calcium (Ca2+) oscillations (SCOs) in astrocytes might be a crucial signaling for the multipurpose role of this type of cell in several brain functions. To interpret experimental data of astrocytic SCOs, which has been largely observed in the last decade, several groups have attempted to accommodate biophysical models that were developed in the past for Ca2+ signaling in other cell types. In most of the cases, only predictive strategies were used to estimate specific parameters of these modified models from actual experiments. In this study, we discuss the most remarkable models used to describe Ca2+ signaling in astrocytes. At the same time, we aim to revise the particulars of applying these models to interpret epifluorescent time series obtained from large regions of interest. Specially, we developed a detailed model for global Ca2+ signaling in the somata of astrocytes. In order to estimate some of the parameters in our model, we propose a deductive reasoning strategy, i.e., a statistical inference method that results from combining a filtering technique and a maximum likelihood principle. By means of computer simulations, we evaluate the accuracy of this estimation's strategy. Finally, we use the new model, in combination with a recent experimental findings by our group, to estimate the degree of cluster coupling inside the soma during the genesis of global Ca2+ events.

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Year:  2011        PMID: 22262535     DOI: 10.1142/S0219635211002877

Source DB:  PubMed          Journal:  J Integr Neurosci        ISSN: 0219-6352            Impact factor:   2.117


  9 in total

1.  Quantifying the uncertainty of spontaneous Ca2+ oscillations in astrocytes: particulars of Alzheimer's disease.

Authors:  J Riera; R Hatanaka; T Uchida; T Ozaki; R Kawashima
Journal:  Biophys J       Date:  2011-08-03       Impact factor: 4.033

Review 2.  Reinforcing Interdisciplinary Collaborations to Unravel the Astrocyte "Calcium Code".

Authors:  Ana Covelo; Anaïs Badoual; Audrey Denizot
Journal:  J Mol Neurosci       Date:  2022-05-11       Impact factor: 2.866

Review 3.  Computational Models for Calcium-Mediated Astrocyte Functions.

Authors:  Tiina Manninen; Riikka Havela; Marja-Leena Linne
Journal:  Front Comput Neurosci       Date:  2018-04-04       Impact factor: 2.380

4.  Reproducibility and Comparability of Computational Models for Astrocyte Calcium Excitability.

Authors:  Tiina Manninen; Riikka Havela; Marja-Leena Linne
Journal:  Front Neuroinform       Date:  2017-02-21       Impact factor: 4.081

5.  Unraveling ChR2-driven stochastic Ca2+ dynamics in astrocytes: A call for new interventional paradigms.

Authors:  Arash Moshkforoush; Lakshmini Balachandar; Carolina Moncion; Karla A Montejo; Jorge Riera
Journal:  PLoS Comput Biol       Date:  2021-02-10       Impact factor: 4.475

6.  Unraveling Aβ-Mediated Multi-Pathway Calcium Dynamics in Astrocytes: Implications for Alzheimer's Disease Treatment From Simulations.

Authors:  Langzhou Liu; Huayi Gao; Alexey Zaikin; Shangbin Chen
Journal:  Front Physiol       Date:  2021-10-28       Impact factor: 4.566

7.  Synaptic neuron-astrocyte communication is supported by an order of magnitude analysis of inositol tris-phosphate diffusion at the nanoscale in a model of peri-synaptic astrocyte projection.

Authors:  Pavel Montes de Oca Balderas; Horacio Montes de Oca Balderas
Journal:  BMC Biophys       Date:  2018-02-12       Impact factor: 4.778

8.  Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures.

Authors:  Tiina Manninen; Jugoslava Aćimović; Riikka Havela; Heidi Teppola; Marja-Leena Linne
Journal:  Front Neuroinform       Date:  2018-05-01       Impact factor: 4.081

9.  Replicability or reproducibility? On the replication crisis in computational neuroscience and sharing only relevant detail.

Authors:  Marcin Miłkowski; Witold M Hensel; Mateusz Hohol
Journal:  J Comput Neurosci       Date:  2018-10-31       Impact factor: 1.621

  9 in total

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