Literature DB >> 22261376

Combining sparseness and smoothness improves classification accuracy and interpretability.

Matthew de Brecht1, Noriko Yamagishi.   

Abstract

Sparse logistic regression (SLR) has been shown to be a useful method for decoding high-dimensional fMRI and MEG data by automatically selecting relevant feature dimensions. However, when applied to signals with high spatio-temporal correlations, SLR often over-prunes the feature space, which can result in overfitting and weight vectors that are difficult to interpret. To overcome this problem, we investigate a modification of ℓ₁-normed sparse logistic regression, called smooth sparse logistic regression (SSLR), which has a spatio-temporal "smoothing" prior that encourages weights that are close in time and space to have similar values. This causes the classifier to select spatio-temporally continuous groups of features, whereas SLR classifiers often select a scattered collection of independent features. We applied the method to both simulation data and real MEG data. We found that SSLR consistently increases classification accuracy, and produces weight vectors that are more meaningful from a neuroscientific perspective. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22261376     DOI: 10.1016/j.neuroimage.2011.12.085

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  8 in total

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2.  Bayesian scalar-on-image regression with application to association between intracranial DTI and cognitive outcomes.

Authors:  Lei Huang; Jeff Goldsmith; Philip T Reiss; Daniel S Reich; Ciprian M Crainiceanu
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3.  Clustering-induced multi-task learning for AD/MCI classification.

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4.  The effect of spatial smoothing on fMRI decoding of columnar-level organization with linear support vector machine.

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5.  Subclass-based multi-task learning for Alzheimer's disease diagnosis.

Authors:  Heung-Ii Suk; Seong-Whan Lee; Dinggang Shen
Journal:  Front Aging Neurosci       Date:  2014-08-07       Impact factor: 5.750

6.  Interpretability of Multivariate Brain Maps in Linear Brain Decoding: Definition, and Heuristic Quantification in Multivariate Analysis of MEG Time-Locked Effects.

Authors:  Seyed Mostafa Kia; Sandro Vega Pons; Nathan Weisz; Andrea Passerini
Journal:  Front Neurosci       Date:  2017-01-23       Impact factor: 4.677

7.  Automated identification of cell-type-specific genes in the mouse brain by image computing of expression patterns.

Authors:  Rongjian Li; Wenlu Zhang; Shuiwang Ji
Journal:  BMC Bioinformatics       Date:  2014-06-20       Impact factor: 3.169

8.  Sparse decoding of multiple spike trains for brain-machine interfaces.

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Journal:  J Neural Eng       Date:  2012-09-06       Impact factor: 5.379

  8 in total

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