Literature DB >> 22259585

2-{1-[(2-Nitro-benzene-sulfonamido)-meth-yl]cyclo-hexyl}acetic acid.

Nosheen Kanwal, Erum Akbar Hussain, Onur Sahin, Orhan Büyükgüngör.   

Abstract

In the title compound, C(15)H(20)N(2)O(6)S, the C-SO(2)-NH-C torsion angle is 64.54 (14)°. In the mol-ecule, there is a bifurcated N-H⋯(O,O) hydrogen bond, forming S(7) rings. In the crystal, inversion dimers are formed via O-H⋯O hydrogen bonds involving the carboxyl group, so forming R(2) (2)(8) rings. These dimers are further linked via pairs of C-H⋯O hydrogen bonds, forming a C(6) chain propagating along the c-axis direction.

Entities:  

Year:  2011        PMID: 22259585      PMCID: PMC3254438          DOI: 10.1107/S160053681105224X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For commercial uses of gabapentin {systematic name: 2-[1-(amino­meth­yl)cyclo­hex­yl]acetic acid}, see: Taylor et al. (1998 ▶); Cesena & Calcutt (1999 ▶); Field et al. (2000 ▶). For the ability of gabapentin to inhibit voltage-dependent Ca2+ channel currents, see: Stefani et al. (1998 ▶); Walker & De Waard (1998 ▶); Martin et al. (2000 ▶); Sutton et al. (2002 ▶). For the graph-set analysis of hydrogen-bond patterns, see: Bernstein et al. (1995 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C15H20N2O6S M = 356.39 Monoclinic, a = 7.7383 (2) Å b = 20.7319 (5) Å c = 11.9460 (3) Å β = 116.869 (1)° V = 1709.59 (7) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 296 K 0.37 × 0.33 × 0.32 mm

Data collection

Bruker APEXII CCD area-detector diffractometer 17069 measured reflections 4247 independent reflections 3202 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.110 S = 1.02 4247 reflections 221 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.29 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681105224X/su2343sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681105224X/su2343Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681105224X/su2343Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H20N2O6SF(000) = 752
Mr = 356.39Dx = 1.385 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5311 reflections
a = 7.7383 (2) Åθ = 2.9–27.2°
b = 20.7319 (5) ŵ = 0.22 mm1
c = 11.9460 (3) ÅT = 296 K
β = 116.869 (1)°Block, colourless
V = 1709.59 (7) Å30.37 × 0.33 × 0.32 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer3202 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.022
graphiteθmax = 28.3°, θmin = 2.0°
phi and ω scansh = −10→10
17069 measured reflectionsk = −27→27
4247 independent reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0492P)2 + 0.4452P] where P = (Fo2 + 2Fc2)/3
4247 reflections(Δ/σ)max < 0.001
221 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.32 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2548 (2)0.54510 (7)0.24581 (13)0.0348 (3)
C20.1197 (2)0.59198 (8)0.14519 (15)0.0438 (4)
H2A0.17870.63440.16190.053*
H2B0.10590.57810.06400.053*
C3−0.0799 (3)0.59682 (9)0.13939 (18)0.0553 (4)
H3A−0.15680.62830.07650.066*
H3B−0.14490.55540.11530.066*
C4−0.0631 (3)0.61664 (10)0.2658 (2)0.0656 (5)
H4A−0.00600.65930.28710.079*
H4B−0.19120.61850.26150.079*
C50.0607 (3)0.56932 (10)0.36644 (19)0.0638 (5)
H5A−0.00330.52770.34930.077*
H5B0.07430.58410.44710.077*
C60.2613 (3)0.56180 (9)0.37290 (15)0.0498 (4)
H6A0.33090.52810.43270.060*
H6B0.33270.60170.40360.060*
C70.4633 (2)0.55220 (8)0.26081 (15)0.0441 (4)
H7A0.50160.59710.27660.053*
H7B0.55090.52750.33330.053*
C80.4837 (2)0.52997 (8)0.14850 (17)0.0453 (4)
C90.1812 (2)0.47606 (7)0.20560 (14)0.0371 (3)
H9A0.05810.47080.20750.045*
H9B0.15950.46940.11990.045*
C100.0958 (2)0.31795 (7)0.19092 (14)0.0377 (3)
C110.1750 (2)0.27787 (7)0.13323 (14)0.0408 (3)
C120.0613 (3)0.23949 (8)0.03334 (17)0.0548 (4)
H120.11740.2125−0.00340.066*
C13−0.1371 (3)0.24136 (10)−0.01188 (19)0.0648 (5)
H13−0.21550.2159−0.08020.078*
C14−0.2189 (3)0.28022 (10)0.0429 (2)0.0632 (5)
H14−0.35280.28130.01160.076*
C15−0.1039 (2)0.31806 (8)0.14452 (18)0.0510 (4)
H15−0.16100.34390.18230.061*
N10.3172 (2)0.42711 (6)0.28645 (14)0.0441 (3)
H10.398 (3)0.4174 (9)0.2660 (18)0.054 (6)*
N20.3849 (2)0.27452 (7)0.17499 (14)0.0516 (4)
O10.4004 (2)0.32564 (6)0.40392 (11)0.0645 (4)
O20.1074 (2)0.38599 (6)0.37366 (13)0.0643 (4)
O30.47073 (19)0.32459 (7)0.18100 (16)0.0724 (4)
O40.4618 (2)0.22220 (7)0.19748 (17)0.0839 (5)
O50.4434 (2)0.56977 (6)0.05920 (13)0.0641 (4)
H50.45960.55250.00300.096*
O60.5377 (2)0.47314 (6)0.14477 (13)0.0626 (4)
S10.23737 (6)0.364280 (19)0.32720 (4)0.04464 (13)
U11U22U33U12U13U23
C10.0359 (7)0.0320 (7)0.0359 (7)−0.0062 (6)0.0158 (6)−0.0050 (6)
C20.0451 (9)0.0381 (8)0.0469 (9)−0.0023 (7)0.0198 (7)0.0030 (7)
C30.0440 (9)0.0509 (10)0.0682 (12)0.0051 (8)0.0230 (9)0.0021 (9)
C40.0558 (11)0.0621 (12)0.0900 (15)−0.0012 (9)0.0428 (11)−0.0182 (11)
C50.0784 (13)0.0681 (13)0.0635 (12)−0.0116 (11)0.0485 (11)−0.0197 (10)
C60.0591 (10)0.0487 (9)0.0400 (8)−0.0074 (8)0.0210 (8)−0.0110 (7)
C70.0372 (8)0.0401 (8)0.0523 (9)−0.0092 (6)0.0177 (7)−0.0065 (7)
C80.0384 (8)0.0411 (9)0.0626 (10)−0.0053 (7)0.0283 (8)0.0014 (7)
C90.0385 (7)0.0343 (7)0.0366 (7)−0.0066 (6)0.0152 (6)−0.0046 (6)
C100.0450 (8)0.0285 (7)0.0408 (8)−0.0020 (6)0.0206 (7)0.0038 (6)
C110.0466 (8)0.0328 (7)0.0427 (8)0.0001 (6)0.0200 (7)0.0026 (6)
C120.0744 (12)0.0411 (9)0.0476 (9)−0.0029 (8)0.0265 (9)−0.0061 (7)
C130.0679 (13)0.0529 (11)0.0524 (11)−0.0158 (10)0.0084 (10)−0.0034 (9)
C140.0453 (10)0.0577 (12)0.0723 (13)−0.0093 (9)0.0140 (9)0.0066 (10)
C150.0471 (9)0.0443 (9)0.0654 (11)−0.0011 (7)0.0287 (8)0.0048 (8)
N10.0445 (8)0.0330 (7)0.0547 (8)−0.0023 (6)0.0223 (7)0.0002 (6)
N20.0531 (8)0.0444 (8)0.0598 (9)0.0074 (7)0.0277 (7)−0.0005 (7)
O10.0750 (9)0.0464 (7)0.0474 (7)0.0032 (6)0.0059 (6)0.0072 (6)
O20.1011 (11)0.0500 (7)0.0670 (8)−0.0077 (7)0.0603 (8)−0.0054 (6)
O30.0548 (8)0.0564 (8)0.1159 (13)−0.0022 (6)0.0474 (8)−0.0012 (8)
O40.0726 (10)0.0507 (8)0.1188 (14)0.0237 (7)0.0347 (9)0.0021 (8)
O50.0783 (9)0.0592 (8)0.0755 (9)0.0146 (7)0.0530 (8)0.0136 (7)
O60.0811 (9)0.0444 (7)0.0816 (9)0.0067 (6)0.0537 (8)0.0045 (6)
S10.0601 (3)0.0345 (2)0.0397 (2)−0.00341 (17)0.02283 (19)0.00003 (15)
C1—C21.532 (2)C9—N11.467 (2)
C1—C91.5350 (19)C9—H9A0.9700
C1—C61.536 (2)C9—H9B0.9700
C1—C71.548 (2)C10—C151.386 (2)
C2—C31.518 (2)C10—C111.387 (2)
C2—H2A0.9700C10—S11.7779 (15)
C2—H2B0.9700C11—C121.372 (2)
C3—C41.513 (3)C11—N21.470 (2)
C3—H3A0.9700C12—C131.379 (3)
C3—H3B0.9700C12—H120.9300
C4—C51.512 (3)C13—C141.360 (3)
C4—H4A0.9700C13—H130.9300
C4—H4B0.9700C14—C151.380 (3)
C5—C61.527 (3)C14—H140.9300
C5—H5A0.9700C15—H150.9300
C5—H5B0.9700N1—S11.6084 (14)
C6—H6A0.9700N1—H10.790 (19)
C6—H6B0.9700N2—O41.2077 (19)
C7—C81.493 (2)N2—O31.2167 (19)
C7—H7A0.9700O1—S11.4244 (13)
C7—H7B0.9700O2—S11.4240 (13)
C8—O61.258 (2)O5—H50.8200
C8—O51.271 (2)
C2—C1—C9108.72 (12)H7A—C7—H7B107.7
C2—C1—C6109.79 (13)O6—C8—O5122.54 (16)
C9—C1—C6111.18 (12)O6—C8—C7119.54 (15)
C2—C1—C7109.67 (12)O5—C8—C7117.92 (15)
C9—C1—C7110.16 (12)N1—C9—C1112.64 (12)
C6—C1—C7107.29 (12)N1—C9—H9A109.1
C3—C2—C1113.41 (13)C1—C9—H9A109.1
C3—C2—H2A108.9N1—C9—H9B109.1
C1—C2—H2A108.9C1—C9—H9B109.1
C3—C2—H2B108.9H9A—C9—H9B107.8
C1—C2—H2B108.9C15—C10—C11117.76 (15)
H2A—C2—H2B107.7C15—C10—S1118.65 (13)
C4—C3—C2110.23 (15)C11—C10—S1123.43 (12)
C4—C3—H3A109.6C12—C11—C10121.73 (16)
C2—C3—H3A109.6C12—C11—N2116.35 (15)
C4—C3—H3B109.6C10—C11—N2121.92 (14)
C2—C3—H3B109.6C11—C12—C13119.16 (18)
H3A—C3—H3B108.1C11—C12—H12120.4
C5—C4—C3110.83 (15)C13—C12—H12120.4
C5—C4—H4A109.5C14—C13—C12120.38 (18)
C3—C4—H4A109.5C14—C13—H13119.8
C5—C4—H4B109.5C12—C13—H13119.8
C3—C4—H4B109.5C13—C14—C15120.32 (18)
H4A—C4—H4B108.1C13—C14—H14119.8
C4—C5—C6111.75 (16)C15—C14—H14119.8
C4—C5—H5A109.3C14—C15—C10120.63 (17)
C6—C5—H5A109.3C14—C15—H15119.7
C4—C5—H5B109.3C10—C15—H15119.7
C6—C5—H5B109.3C9—N1—S1120.04 (11)
H5A—C5—H5B107.9C9—N1—H1113.8 (14)
C5—C6—C1113.24 (14)S1—N1—H1110.6 (14)
C5—C6—H6A108.9O4—N2—O3123.53 (16)
C1—C6—H6A108.9O4—N2—C11118.41 (15)
C5—C6—H6B108.9O3—N2—C11118.01 (14)
C1—C6—H6B108.9C8—O5—H5109.5
H6A—C6—H6B107.7O2—S1—O1120.24 (9)
C8—C7—C1113.23 (12)O2—S1—N1107.30 (8)
C8—C7—H7A108.9O1—S1—N1107.49 (8)
C1—C7—H7A108.9O2—S1—C10106.03 (8)
C8—C7—H7B108.9O1—S1—C10106.58 (7)
C1—C7—H7B108.9N1—S1—C10108.81 (7)
C9—C1—C2—C369.39 (17)C10—C11—C12—C130.8 (3)
C6—C1—C2—C3−52.45 (18)N2—C11—C12—C13−178.76 (16)
C7—C1—C2—C3−170.10 (13)C11—C12—C13—C14−0.8 (3)
C1—C2—C3—C457.0 (2)C12—C13—C14—C15−0.2 (3)
C2—C3—C4—C5−57.7 (2)C13—C14—C15—C101.2 (3)
C3—C4—C5—C656.3 (2)C11—C10—C15—C14−1.1 (2)
C4—C5—C6—C1−53.1 (2)S1—C10—C15—C14−176.65 (14)
C2—C1—C6—C550.00 (18)C1—C9—N1—S1139.40 (12)
C9—C1—C6—C5−70.36 (18)C12—C11—N2—O4−52.4 (2)
C7—C1—C6—C5169.12 (15)C10—C11—N2—O4128.05 (18)
C2—C1—C7—C8−67.57 (17)C12—C11—N2—O3125.20 (18)
C9—C1—C7—C852.07 (17)C10—C11—N2—O3−54.3 (2)
C6—C1—C7—C8173.23 (14)C9—N1—S1—O2−49.77 (14)
C1—C7—C8—O6−94.18 (18)C9—N1—S1—O1179.59 (12)
C1—C7—C8—O585.21 (18)C9—N1—S1—C1064.54 (14)
C2—C1—C9—N1171.39 (13)C15—C10—S1—O28.75 (15)
C6—C1—C9—N1−67.63 (17)C11—C10—S1—O2−166.48 (13)
C7—C1—C9—N151.19 (17)C15—C10—S1—O1137.98 (13)
C15—C10—C11—C120.2 (2)C11—C10—S1—O1−37.26 (15)
S1—C10—C11—C12175.44 (13)C15—C10—S1—N1−106.38 (13)
C15—C10—C11—N2179.68 (14)C11—C10—S1—N178.38 (14)
S1—C10—C11—N2−5.0 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O30.790 (19)2.362 (19)2.978 (2)135.6 (18)
N1—H1···O60.790 (19)2.455 (19)3.050 (2)133.0 (18)
O5—H5···O6i0.821.852.6595 (18)168
C12—H12···O2ii0.932.503.339 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O30.790 (19)2.362 (19)2.978 (2)135.6 (18)
N1—H1⋯O60.790 (19)2.455 (19)3.050 (2)133.0 (18)
O5—H5⋯O6i0.821.852.6595 (18)168
C12—H12⋯O2ii0.932.503.339 (2)151

Symmetry codes: (i) ; (ii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Further evidence for the role of the alpha(2)delta subunit of voltage dependent calcium channels in models of neuropathic pain.

Authors:  M J Field; J Hughes; L Singh
Journal:  Br J Pharmacol       Date:  2000-09       Impact factor: 8.739

Review 3.  A summary of mechanistic hypotheses of gabapentin pharmacology.

Authors:  C P Taylor; N S Gee; T Z Su; J D Kocsis; D F Welty; J P Brown; D J Dooley; P Boden; L Singh
Journal:  Epilepsy Res       Date:  1998-02       Impact factor: 3.045

Review 4.  Subunit interaction sites in voltage-dependent Ca2+ channels: role in channel function.

Authors:  D Walker; M De Waard
Journal:  Trends Neurosci       Date:  1998-04       Impact factor: 13.837

5.  Gabapentin prevents hyperalgesia during the formalin test in diabetic rats.

Authors:  R M Ceseña; N A Calcutt
Journal:  Neurosci Lett       Date:  1999-03-05       Impact factor: 3.046

6.  Gabapentin inhibits high-threshold calcium channel currents in cultured rat dorsal root ganglion neurones.

Authors:  K G Sutton; D J Martin; R D Pinnock; K Lee; R H Scott
Journal:  Br J Pharmacol       Date:  2002-01       Impact factor: 8.739

7.  Gabapentin inhibits calcium currents in isolated rat brain neurons.

Authors:  A Stefani; F Spadoni; G Bernardi
Journal:  Neuropharmacology       Date:  1998       Impact factor: 5.250

  7 in total

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