Literature DB >> 22259490

N-Methyl-3,5-dinitro-benzamide.

Gui-Ming Deng, Chao-Run Wang, Zhen Chen, He-Ming Zhang.   

Abstract

The asymmetric unit of the title compound, C(8)H(7)N(3)O(5), contains two independent mol-ecules in which the amide plane is oriented at dihedral angles of 29.82 (2) and 31.17 (2)° with respect to the benzene ring. In the crystal, mol-ecules are connected via inter-molecular N-H⋯O hydrogen bonds, forming chains running along the b axis.

Entities:  

Year:  2011        PMID: 22259490      PMCID: PMC3254543          DOI: 10.1107/S1600536811053888

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the biological activity of benzamide derivatives, see: Lee et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C8H7N3O5 M = 225.16 Orthorhombic, a = 10.716 (2) Å b = 10.057 (2) Å c = 36.101 (7) Å V = 3890.6 (13) Å3 Z = 16 Mo Kα radiation μ = 0.13 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.962, T max = 0.987 4711 measured reflections 3402 independent reflections 1653 reflections with I > 2σ(I) R int = 0.0582 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.067 wR(F 2) = 0.162 S = 0.96 3402 reflections 289 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1985 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811053888/xu5409sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811053888/xu5409Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811053888/xu5409Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H7N3O5F(000) = 1856
Mr = 225.16Dx = 1.538 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 25 reflections
a = 10.716 (2) Åθ = 9–13°
b = 10.057 (2) ŵ = 0.13 mm1
c = 36.101 (7) ÅT = 293 K
V = 3890.6 (13) Å3Block, yellow
Z = 160.30 × 0.20 × 0.10 mm
Enraf–Nonius CAD-4 diffractometer1653 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.058
graphiteθmax = 25.1°, θmin = 2.2°
ω/2θ scansh = 0→12
Absorption correction: ψ scan (North et al., 1968)k = 0→11
Tmin = 0.962, Tmax = 0.987l = 0→42
4711 measured reflections3 standard reflections every 200 reflections
3402 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.067Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.162H-atom parameters constrained
S = 0.96w = 1/[σ2(Fo2) + (0.0619P)2] where P = (Fo2 + 2Fc2)/3
3402 reflections(Δ/σ)max < 0.001
289 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N11.1588 (3)0.7222 (4)0.65015 (10)0.0554 (9)
C10.9707 (3)0.8426 (4)0.67035 (11)0.0444 (10)
H1A0.92210.77950.65820.053*
O11.0927 (3)0.6404 (3)0.63547 (10)0.0798 (11)
O21.2734 (2)0.7187 (3)0.64960 (8)0.0716 (9)
C21.0989 (3)0.8326 (4)0.67030 (11)0.0462 (10)
N21.1949 (4)1.1247 (4)0.72609 (10)0.0571 (10)
N30.7009 (3)0.8718 (3)0.68582 (10)0.0568 (10)
H3A0.73140.79270.68500.068*
O31.3077 (3)1.1073 (3)0.72618 (9)0.0726 (10)
C31.1751 (3)0.9227 (4)0.68860 (12)0.0521 (11)
H3B1.26160.91480.68850.063*
O41.1423 (3)1.2198 (3)0.74015 (10)0.0745 (10)
C41.1155 (3)1.0243 (4)0.70688 (12)0.0461 (10)
O50.7395 (2)1.0907 (2)0.68914 (9)0.0636 (9)
C50.9889 (3)1.0400 (4)0.70711 (11)0.0437 (10)
H5A0.95271.11140.71940.052*
C60.9151 (3)0.9481 (3)0.68874 (10)0.0413 (10)
C70.7776 (3)0.9749 (4)0.68801 (11)0.0445 (10)
C80.5670 (3)0.8895 (4)0.68472 (14)0.0705 (14)
H8A0.52720.80420.68320.106*
H8B0.54500.94160.66340.106*
H8C0.54010.93440.70680.106*
O60.3317 (3)0.2716 (3)0.39302 (10)0.0788 (11)
O70.1844 (3)0.1345 (4)0.40663 (10)0.0918 (12)
O80.2726 (3)−0.2445 (4)0.48397 (10)0.0938 (12)
O90.4620 (4)−0.2891 (4)0.49911 (11)0.0952 (12)
O100.7598 (2)0.1750 (2)0.42863 (8)0.0614 (9)
N40.2939 (3)0.1676 (4)0.40662 (11)0.0617 (11)
N50.3840 (4)−0.2228 (4)0.48302 (11)0.0669 (11)
N60.8109 (3)−0.0414 (3)0.43239 (9)0.0503 (10)
H6A0.7843−0.12120.43560.060*
C90.5097 (3)0.1061 (4)0.42133 (11)0.0452 (10)
H9A0.53640.18060.40830.054*
C100.3841 (3)0.0788 (4)0.42467 (12)0.0501 (11)
C110.3408 (4)−0.0288 (4)0.44465 (12)0.0560 (11)
H11A0.2558−0.04600.44690.067*
C120.4279 (3)−0.1087 (4)0.46088 (11)0.0481 (10)
C130.5549 (3)−0.0875 (3)0.45744 (11)0.0468 (10)
H13A0.6116−0.14570.46830.056*
C140.5960 (3)0.0213 (3)0.43772 (11)0.0390 (9)
C150.7307 (3)0.0574 (3)0.43282 (11)0.0435 (10)
C160.9431 (3)−0.0190 (4)0.42662 (15)0.0718 (14)
H16A0.9863−0.10250.42700.108*
H16B0.97480.03720.44600.108*
H16C0.95570.02340.40310.108*
U11U22U33U12U13U23
N10.063 (2)0.052 (2)0.051 (3)0.010 (2)0.003 (2)−0.001 (2)
C10.046 (2)0.039 (2)0.048 (3)−0.0017 (18)−0.004 (2)−0.002 (2)
O10.082 (2)0.064 (2)0.093 (3)−0.0010 (18)0.012 (2)−0.035 (2)
O20.0549 (19)0.091 (2)0.069 (2)0.0238 (17)0.0071 (17)−0.0031 (19)
C20.052 (2)0.038 (2)0.049 (3)0.0070 (19)0.003 (2)−0.001 (2)
N20.058 (2)0.057 (2)0.056 (3)−0.012 (2)−0.010 (2)0.000 (2)
N30.0419 (17)0.0308 (16)0.098 (3)−0.0009 (15)−0.0010 (18)0.007 (2)
O30.0486 (17)0.091 (2)0.078 (2)−0.0116 (17)−0.0149 (17)0.003 (2)
C30.043 (2)0.052 (2)0.061 (3)0.005 (2)−0.003 (2)0.009 (2)
O40.077 (2)0.0621 (19)0.085 (3)−0.0036 (18)−0.0174 (18)−0.021 (2)
C40.042 (2)0.042 (2)0.055 (3)−0.0048 (19)−0.004 (2)0.002 (2)
O50.0520 (16)0.0334 (15)0.106 (3)0.0035 (13)−0.0022 (17)−0.0014 (15)
C50.048 (2)0.040 (2)0.043 (2)−0.0008 (19)0.0021 (19)0.001 (2)
C60.042 (2)0.034 (2)0.048 (3)0.0019 (18)0.000 (2)0.004 (2)
C70.054 (2)0.031 (2)0.049 (3)0.001 (2)0.001 (2)0.001 (2)
C80.045 (2)0.051 (2)0.116 (4)−0.001 (2)0.000 (3)0.002 (3)
O60.068 (2)0.066 (2)0.102 (3)0.0145 (19)−0.019 (2)0.010 (2)
O70.0410 (17)0.129 (3)0.106 (3)−0.0026 (19)−0.0210 (18)0.015 (2)
O80.072 (2)0.117 (3)0.092 (3)−0.041 (2)0.016 (2)0.019 (2)
O90.099 (3)0.079 (3)0.108 (3)−0.009 (2)0.016 (2)0.032 (2)
O100.0528 (16)0.0324 (14)0.099 (2)−0.0012 (13)0.0006 (17)0.0076 (16)
N40.046 (2)0.075 (3)0.064 (3)0.010 (2)−0.016 (2)−0.014 (2)
N50.073 (3)0.069 (3)0.058 (3)−0.020 (2)0.014 (2)0.000 (2)
N60.0394 (17)0.0264 (16)0.085 (3)−0.0011 (14)0.0063 (17)0.0019 (18)
C90.046 (2)0.035 (2)0.055 (3)−0.0028 (18)0.000 (2)−0.003 (2)
C100.046 (2)0.049 (2)0.056 (3)0.003 (2)−0.008 (2)−0.014 (2)
C110.051 (2)0.061 (3)0.055 (3)−0.007 (2)0.005 (2)−0.009 (2)
C120.053 (2)0.044 (2)0.047 (3)−0.010 (2)0.009 (2)0.001 (2)
C130.055 (2)0.037 (2)0.049 (3)−0.0001 (19)0.002 (2)−0.004 (2)
C140.040 (2)0.0296 (18)0.047 (2)0.0027 (17)−0.0007 (18)−0.0053 (19)
C150.048 (2)0.027 (2)0.056 (3)−0.0007 (18)−0.003 (2)−0.0014 (19)
C160.045 (2)0.049 (2)0.121 (4)−0.002 (2)0.007 (3)0.016 (3)
N1—O11.207 (4)O6—N41.224 (4)
N1—O21.229 (4)O7—N41.221 (4)
N1—C21.475 (5)O8—N51.214 (4)
C1—C21.378 (5)O9—N51.217 (4)
C1—C61.386 (5)O10—C151.232 (4)
C1—H1A0.9300N4—C101.468 (5)
C2—C31.387 (5)N5—C121.475 (5)
N2—O41.221 (4)N6—C151.314 (4)
N2—O31.221 (4)N6—C161.449 (4)
N2—C41.491 (5)N6—H6A0.8600
N3—C71.325 (4)C9—C101.379 (5)
N3—C81.446 (4)C9—C141.391 (5)
N3—H3A0.8600C9—H9A0.9300
C3—C41.374 (5)C10—C111.381 (5)
C3—H3B0.9300C11—C121.364 (5)
C4—C51.366 (5)C11—H11A0.9300
O5—C71.234 (4)C12—C131.383 (5)
C5—C61.385 (5)C13—C141.378 (5)
C5—H5A0.9300C13—H13A0.9300
C6—C71.498 (5)C14—C151.498 (5)
C8—H8A0.9600C16—H16A0.9600
C8—H8B0.9600C16—H16B0.9600
C8—H8C0.9600C16—H16C0.9600
O1—N1—O2124.0 (4)O7—N4—O6123.5 (4)
O1—N1—C2118.3 (3)O7—N4—C10117.8 (4)
O2—N1—C2117.6 (4)O6—N4—C10118.7 (3)
C2—C1—C6119.0 (3)O8—N5—O9124.3 (4)
C2—C1—H1A120.5O8—N5—C12118.0 (4)
C6—C1—H1A120.5O9—N5—C12117.7 (4)
C1—C2—C3122.6 (4)C15—N6—C16121.6 (3)
C1—C2—N1119.3 (4)C15—N6—H6A119.2
C3—C2—N1118.1 (3)C16—N6—H6A119.2
O4—N2—O3124.6 (4)C10—C9—C14119.4 (4)
O4—N2—C4117.4 (3)C10—C9—H9A120.3
O3—N2—C4118.0 (4)C14—C9—H9A120.3
C7—N3—C8121.3 (3)C9—C10—C11122.0 (4)
C7—N3—H3A119.3C9—C10—N4118.8 (4)
C8—N3—H3A119.3C11—C10—N4119.2 (4)
C4—C3—C2116.2 (3)C12—C11—C10117.1 (4)
C4—C3—H3B121.9C12—C11—H11A121.4
C2—C3—H3B121.9C10—C11—H11A121.4
C5—C4—C3123.4 (4)C11—C12—C13122.9 (4)
C5—C4—N2119.1 (4)C11—C12—N5118.2 (4)
C3—C4—N2117.5 (3)C13—C12—N5118.9 (4)
C4—C5—C6119.2 (4)C14—C13—C12119.0 (4)
C4—C5—H5A120.4C14—C13—H13A120.5
C6—C5—H5A120.4C12—C13—H13A120.5
C5—C6—C1119.6 (3)C13—C14—C9119.6 (3)
C5—C6—C7116.7 (3)C13—C14—C15124.2 (3)
C1—C6—C7123.5 (3)C9—C14—C15116.2 (3)
O5—C7—N3122.4 (3)O10—C15—N6123.9 (3)
O5—C7—C6119.6 (3)O10—C15—C14119.4 (3)
N3—C7—C6118.0 (3)N6—C15—C14116.6 (3)
N3—C8—H8A109.5N6—C16—H16A109.5
N3—C8—H8B109.5N6—C16—H16B109.5
H8A—C8—H8B109.5H16A—C16—H16B109.5
N3—C8—H8C109.5N6—C16—H16C109.5
H8A—C8—H8C109.5H16A—C16—H16C109.5
H8B—C8—H8C109.5H16B—C16—H16C109.5
C6—C1—C2—C31.3 (6)C14—C9—C10—C111.7 (6)
C6—C1—C2—N1−178.8 (3)C14—C9—C10—N4−178.8 (3)
O1—N1—C2—C1−2.9 (6)O7—N4—C10—C9172.6 (4)
O2—N1—C2—C1177.6 (4)O6—N4—C10—C9−8.7 (6)
O1—N1—C2—C3177.0 (4)O7—N4—C10—C11−7.8 (6)
O2—N1—C2—C3−2.5 (5)O6—N4—C10—C11170.8 (4)
C1—C2—C3—C4−0.4 (6)C9—C10—C11—C12−0.6 (6)
N1—C2—C3—C4179.7 (3)N4—C10—C11—C12179.9 (4)
C2—C3—C4—C5−1.0 (6)C10—C11—C12—C13−1.3 (6)
C2—C3—C4—N2−178.6 (3)C10—C11—C12—N5178.8 (4)
O4—N2—C4—C5−2.6 (6)O8—N5—C12—C114.2 (6)
O3—N2—C4—C5178.6 (4)O9—N5—C12—C11−175.9 (4)
O4—N2—C4—C3175.1 (4)O8—N5—C12—C13−175.8 (4)
O3—N2—C4—C3−3.8 (6)O9—N5—C12—C134.1 (6)
C3—C4—C5—C61.4 (6)C11—C12—C13—C142.0 (6)
N2—C4—C5—C6178.9 (3)N5—C12—C13—C14−178.1 (3)
C4—C5—C6—C1−0.3 (5)C12—C13—C14—C9−0.8 (5)
C4—C5—C6—C7−176.4 (3)C12—C13—C14—C15178.3 (4)
C2—C1—C6—C5−1.0 (5)C10—C9—C14—C13−0.9 (6)
C2—C1—C6—C7174.8 (4)C10—C9—C14—C15179.9 (3)
C8—N3—C7—O5−0.2 (7)C16—N6—C15—O10−0.3 (7)
C8—N3—C7—C6−179.6 (4)C16—N6—C15—C14177.9 (3)
C5—C6—C7—O529.1 (5)C13—C14—C15—O10−151.0 (4)
C1—C6—C7—O5−146.9 (4)C9—C14—C15—O1028.1 (5)
C5—C6—C7—N3−151.5 (4)C13—C14—C15—N630.6 (6)
C1—C6—C7—N332.5 (6)C9—C14—C15—N6−150.3 (4)
D—H···AD—HH···AD···AD—H···A
N3—H3A···O5i0.862.062.900 (4)165.
N6—H6A···O10i0.862.122.955 (4)164.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯O5i0.862.062.900 (4)165
N6—H6A⋯O10i0.862.122.955 (4)164

Symmetry code: (i) .

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