Literature DB >> 22259450

Methyl 2-(8a-hy-droxy-4a-methyl-8-methyl-enedeca-hydro-naphthalen-2-yl)acrylate.

Mohamed Tebbaa, Ahmed Benharref, Abdelghani Oudahmane, Fouad Mellouki, Moha Berraho.   

Abstract

The title compound, C(16)H(24)O(3), was synthesized from ilicic acid which was isolated from the aerial part of Inula Viscosa- (L) Aiton [or Dittrichia Viscosa- (L) Greuter]. The mol-ecule contains two fused six-membered rings both in chair conformations. In the crystal, mol-ecules are linked into chains running parallel to the a axis by O-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22259450      PMCID: PMC3254506          DOI: 10.1107/S1600536811053712

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Barrero et al. (2009 ▶). For the medicinal and pharmacological properties of Inula Viscosa (L) Aiton [or Dittrichia Viscosa­ (L) Greuter], see: Shtacher & Kasshman (1970 ▶); Bohlmann et al. (1977 ▶); Chiappini et al. (1982 ▶); Azoulay et al. (1986 ▶); Bohlmann et al. (1977 ▶); Ceccherelli et al. (1988 ▶). For background to phytochemical studies of plants, see: Geissman & Toribio (1967 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C16H24O3 M = 264.35 Orthorhombic, a = 6.0666 (5) Å b = 10.0900 (9) Å c = 23.747 (2) Å V = 1453.6 (2) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.65 × 0.45 × 0.26 mm

Data collection

Bruker APEXII CCD diffractometer 6831 measured reflections 1745 independent reflections 1202 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.114 S = 1.04 1745 reflections 176 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811053712/bt5751sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811053712/bt5751Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811053712/bt5751Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H24O3F(000) = 576
Mr = 264.35Dx = 1.208 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 6881 reflections
a = 6.0666 (5) Åθ = 3.5–26.4°
b = 10.0900 (9) ŵ = 0.08 mm1
c = 23.747 (2) ÅT = 296 K
V = 1453.6 (2) Å3Prism, colourless
Z = 40.65 × 0.45 × 0.26 mm
Bruker APEXII CCD diffractometer1202 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.050
graphiteθmax = 26.4°, θmin = 3.5°
φ and ω scansh = −7→7
6831 measured reflectionsk = −11→12
1745 independent reflectionsl = −29→29
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.114w = 1/[σ2(Fo2) + (0.056P)2 + 0.0754P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
1745 reflectionsΔρmax = 0.18 e Å3
176 parametersΔρmin = −0.19 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.009 (2)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1942 (5)0.9387 (3)0.90963 (10)0.0356 (7)
H1A0.06010.98830.90260.043*
H1B0.15980.84510.90640.043*
C20.2754 (5)0.9680 (3)0.96934 (11)0.0383 (7)
H20.40890.91530.97560.046*
C30.3401 (6)1.1152 (3)0.97421 (12)0.0471 (8)
H3A0.20931.16970.97020.056*
H3B0.40191.13151.01120.056*
C40.5077 (5)1.1547 (3)0.92942 (12)0.0443 (8)
H4A0.64481.10820.93650.053*
H4B0.53691.24890.93260.053*
C4A0.4312 (5)1.1240 (3)0.86892 (11)0.0347 (7)
C50.6221 (5)1.1502 (3)0.82769 (12)0.0449 (8)
H5A0.66041.24350.82910.054*
H5B0.75001.10000.83970.054*
C60.5660 (6)1.1129 (4)0.76711 (13)0.0538 (9)
H6A0.69671.12220.74390.065*
H6B0.45491.17330.75280.065*
C70.4804 (5)0.9707 (3)0.76277 (12)0.0458 (8)
H7A0.42420.95540.72510.055*
H7B0.60120.90940.76910.055*
C80.3005 (5)0.9442 (3)0.80496 (11)0.0364 (7)
C8A0.3675 (4)0.9758 (3)0.86540 (11)0.0323 (7)
C90.1081 (5)0.9271 (3)1.01354 (12)0.0417 (8)
C100.1797 (6)0.9201 (3)1.07371 (12)0.0438 (8)
C110.4791 (6)0.9357 (4)1.13715 (12)0.0622 (10)
H11A0.43071.01401.15650.093*
H11B0.63730.93371.13640.093*
H11C0.42510.85861.15640.093*
C120.2369 (5)1.2136 (3)0.85384 (14)0.0507 (9)
H12A0.28441.30440.85370.076*
H12B0.12171.20240.88110.076*
H12C0.18241.19040.81720.076*
C130.1041 (5)0.8994 (3)0.79041 (12)0.0480 (8)
H13A0.07230.88290.75270.058*
H13B−0.00250.88430.81780.058*
C15−0.0984 (6)0.8966 (4)1.00336 (14)0.0586 (10)
H15A−0.19100.87241.03280.070*
H15B−0.15200.89920.96670.070*
O10.5665 (3)0.9020 (2)0.87737 (8)0.0406 (5)
H10.54250.82250.87340.061*
O20.3955 (4)0.9371 (2)1.08027 (8)0.0514 (6)
O30.0589 (4)0.8972 (3)1.11270 (9)0.0684 (8)
U11U22U33U12U13U23
C10.0353 (17)0.0361 (17)0.0354 (15)−0.0003 (14)0.0008 (12)0.0014 (14)
C20.0363 (17)0.0434 (19)0.0352 (15)−0.0013 (15)0.0007 (12)0.0009 (14)
C30.056 (2)0.047 (2)0.0380 (15)−0.0083 (17)0.0031 (15)−0.0083 (15)
C40.049 (2)0.0409 (18)0.0430 (17)−0.0123 (16)−0.0021 (15)−0.0041 (14)
C4A0.0386 (17)0.0309 (16)0.0344 (13)−0.0028 (13)−0.0020 (13)0.0018 (12)
C50.046 (2)0.0416 (19)0.0469 (17)−0.0073 (16)0.0046 (15)0.0040 (15)
C60.060 (2)0.057 (2)0.0444 (16)−0.0056 (19)0.0084 (17)0.0056 (17)
C70.055 (2)0.051 (2)0.0320 (14)−0.0024 (17)0.0040 (14)−0.0020 (15)
C80.0417 (18)0.0327 (17)0.0348 (14)0.0041 (15)−0.0043 (13)−0.0010 (14)
C8A0.0308 (17)0.0316 (16)0.0347 (14)0.0022 (12)−0.0012 (12)0.0023 (13)
C90.0396 (19)0.047 (2)0.0387 (14)−0.0005 (16)0.0036 (13)−0.0008 (15)
C100.047 (2)0.046 (2)0.0386 (16)−0.0012 (16)0.0038 (15)0.0002 (15)
C110.062 (2)0.086 (3)0.0396 (16)0.001 (2)−0.0049 (15)−0.0004 (18)
C120.055 (2)0.0378 (19)0.059 (2)0.0032 (16)−0.0014 (16)0.0036 (17)
C130.049 (2)0.056 (2)0.0389 (15)−0.0014 (18)−0.0085 (14)−0.0026 (16)
C150.044 (2)0.080 (3)0.0513 (19)−0.008 (2)0.0048 (16)0.0058 (19)
O10.0377 (12)0.0393 (12)0.0447 (11)0.0068 (10)−0.0038 (9)0.0005 (11)
O20.0436 (14)0.0750 (17)0.0354 (10)−0.0031 (13)0.0001 (9)0.0007 (12)
O30.0595 (16)0.103 (2)0.0431 (12)−0.0137 (16)0.0125 (11)0.0082 (13)
C1—C21.530 (4)C7—C81.506 (4)
C1—C8A1.533 (4)C7—H7A0.9700
C1—H1A0.9700C7—H7B0.9700
C1—H1B0.9700C8—C131.320 (4)
C2—C91.518 (4)C8—C8A1.525 (4)
C2—C31.541 (4)C8A—O11.446 (3)
C2—H20.9800C9—C151.312 (5)
C3—C41.524 (4)C9—C101.495 (4)
C3—H3A0.9700C10—O31.203 (4)
C3—H3B0.9700C10—O21.330 (4)
C4—C4A1.541 (4)C11—O21.443 (3)
C4—H4A0.9700C11—H11A0.9600
C4—H4B0.9700C11—H11B0.9600
C4A—C121.528 (4)C11—H11C0.9600
C4A—C51.539 (4)C12—H12A0.9600
C4A—C8A1.547 (4)C12—H12B0.9600
C5—C61.526 (4)C12—H12C0.9600
C5—H5A0.9700C13—H13A0.9300
C5—H5B0.9700C13—H13B0.9300
C6—C71.530 (5)C15—H15A0.9300
C6—H6A0.9700C15—H15B0.9300
C6—H6B0.9700O1—H10.8200
C2—C1—C8A111.5 (2)C8—C7—C6111.6 (3)
C2—C1—H1A109.3C8—C7—H7A109.3
C8A—C1—H1A109.3C6—C7—H7A109.3
C2—C1—H1B109.3C8—C7—H7B109.3
C8A—C1—H1B109.3C6—C7—H7B109.3
H1A—C1—H1B108.0H7A—C7—H7B108.0
C9—C2—C1111.9 (2)C13—C8—C7122.7 (3)
C9—C2—C3112.4 (2)C13—C8—C8A124.0 (3)
C1—C2—C3109.8 (2)C7—C8—C8A113.3 (2)
C9—C2—H2107.5O1—C8A—C8107.5 (2)
C1—C2—H2107.5O1—C8A—C1108.2 (2)
C3—C2—H2107.5C8—C8A—C1114.2 (2)
C4—C3—C2111.7 (2)O1—C8A—C4A106.2 (2)
C4—C3—H3A109.3C8—C8A—C4A108.6 (2)
C2—C3—H3A109.3C1—C8A—C4A111.7 (2)
C4—C3—H3B109.3C15—C9—C10116.3 (3)
C2—C3—H3B109.3C15—C9—C2125.1 (3)
H3A—C3—H3B107.9C10—C9—C2118.7 (3)
C3—C4—C4A113.4 (3)O3—C10—O2122.3 (3)
C3—C4—H4A108.9O3—C10—C9124.6 (3)
C4A—C4—H4A108.9O2—C10—C9113.1 (3)
C3—C4—H4B108.9O2—C11—H11A109.5
C4A—C4—H4B108.9O2—C11—H11B109.5
H4A—C4—H4B107.7H11A—C11—H11B109.5
C12—C4A—C5109.2 (2)O2—C11—H11C109.5
C12—C4A—C4109.4 (2)H11A—C11—H11C109.5
C5—C4A—C4109.4 (2)H11B—C11—H11C109.5
C12—C4A—C8A111.5 (2)C4A—C12—H12A109.5
C5—C4A—C8A108.6 (2)C4A—C12—H12B109.5
C4—C4A—C8A108.6 (2)H12A—C12—H12B109.5
C6—C5—C4A112.9 (3)C4A—C12—H12C109.5
C6—C5—H5A109.0H12A—C12—H12C109.5
C4A—C5—H5A109.0H12B—C12—H12C109.5
C6—C5—H5B109.0C8—C13—H13A120.0
C4A—C5—H5B109.0C8—C13—H13B120.0
H5A—C5—H5B107.8H13A—C13—H13B120.0
C5—C6—C7111.8 (3)C9—C15—H15A120.0
C5—C6—H6A109.3C9—C15—H15B120.0
C7—C6—H6A109.3H15A—C15—H15B120.0
C5—C6—H6B109.3C8A—O1—H1109.5
C7—C6—H6B109.3C10—O2—C11117.1 (2)
H6A—C6—H6B107.9
D—H···AD—HH···AD···AD—H···A
O1—H1···O3i0.822.243.033 (4)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O3i0.822.243.033 (4)161

Symmetry code: (i) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure of Cyperanic Acid, a New Sesquiterpene from Dittrichia viscosa.

Authors:  P Ceccherelli; M Curini; M C Marcotullio; A Menghini
Journal:  J Nat Prod       Date:  1988-09       Impact factor: 4.050

3.  [Helenine and santonine, the 12-carboxy-eudesma-3,11(13) diene].

Authors:  P Azoulay; J P Reynier; G Balansard; M Gasquet; P Timon-David
Journal:  Pharm Acta Helv       Date:  1986

4.  Flavonoids from Dittrichia viscosa.

Authors:  I Chiappini; G Fardella; A Menghini; C Rossi
Journal:  Planta Med       Date:  1982-03       Impact factor: 3.352

5.  12-carboxyeudesma-3,11(13)-diene. A novel sesquiterpenic acid with a narrow antifungal spectrum.

Authors:  G Shtacher; Y Kashman
Journal:  J Med Chem       Date:  1970-11       Impact factor: 7.446

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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