| Literature DB >> 22259420 |
Abstract
The asymmetric unit of the title compound, C(8)H(8)N(2)O(4), consists of one complete mol-ecule and a second mol-ecule generated by the application of twofold axis. The mean planes of the two carboxyl groups attached to the pyrazine ring at neighboring positions are twisted by 10.8 (1) and 87.9 (1)° in the complete molecule and 43.0 (1)° in the symmetry-generated molecule. The crystal packing features O-H⋯N hydrogen bonds, which link the mol-ecules into layers along [101].Entities:
Year: 2011 PMID: 22259420 PMCID: PMC3254478 DOI: 10.1107/S1600536811052366
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H8N2O4 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 10631 reflections |
| θ = 3.4–27.8° | |
| µ = 0.13 mm−1 | |
| β = 109.21 (3)° | Block, colourless |
| 0.30 × 0.25 × 0.20 mm | |
| Rigaku SCX-mini diffractometer | 1937 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.0°, θmin = 3.4° |
| ω scans | |
| 10832 measured reflections | |
| 2230 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2230 reflections | (Δ/σ)max < 0.001 |
| 196 parameters | Δρmax = 0.63 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.28005 (14) | 0.38972 (11) | 0.78999 (16) | 0.0595 (6) | |
| H1 | 0.2587 | 0.3468 | 0.7428 | 0.089* | |
| O2 | 0.17345 (15) | 0.47314 (13) | 0.66739 (18) | 0.0745 (7) | |
| O3 | 0.20112 (11) | 0.67092 (14) | 0.57803 (14) | 0.0482 (5) | |
| H3 | 0.1591 | 0.6847 | 0.5190 | 0.072* | |
| O4 | 0.09881 (12) | 0.67291 (15) | 0.66709 (16) | 0.0567 (5) | |
| O5 | 0.40546 (13) | 0.35937 (12) | 0.02848 (13) | 0.0474 (5) | |
| H5 | 0.3815 | 0.4101 | 0.0026 | 0.071* | |
| O6 | 0.40159 (11) | 0.41517 (11) | 0.20060 (15) | 0.0439 (4) | |
| N1 | 0.34098 (12) | 0.54156 (12) | 0.92729 (14) | 0.0318 (4) | |
| N2 | 0.28289 (12) | 0.72021 (12) | 0.84036 (15) | 0.0325 (4) | |
| N3 | 0.43566 (12) | 0.18493 (12) | 0.14017 (14) | 0.0311 (4) | |
| C1 | 0.23855 (16) | 0.46795 (15) | 0.75119 (19) | 0.0362 (5) | |
| C2 | 0.27656 (14) | 0.55308 (14) | 0.82342 (17) | 0.0291 (5) | |
| C3 | 0.37616 (14) | 0.61868 (15) | 0.98780 (18) | 0.0325 (5) | |
| C4 | 0.44770 (18) | 0.60708 (18) | 1.1037 (2) | 0.0491 (7) | |
| H4A | 0.4231 | 0.6160 | 1.1662 | 0.074* | |
| H4B | 0.4936 | 0.6534 | 1.1110 | 0.074* | |
| H4C | 0.4726 | 0.5444 | 1.1090 | 0.074* | |
| C5 | 0.17291 (15) | 0.66150 (14) | 0.66717 (19) | 0.0324 (5) | |
| C6 | 0.24752 (13) | 0.64193 (14) | 0.78045 (17) | 0.0276 (5) | |
| C7 | 0.34688 (14) | 0.70945 (15) | 0.94401 (18) | 0.0315 (5) | |
| C8 | 0.38542 (18) | 0.79617 (17) | 1.0119 (2) | 0.0489 (7) | |
| H8A | 0.4458 | 0.8040 | 1.0132 | 0.073* | |
| H8B | 0.3846 | 0.7900 | 1.0913 | 0.073* | |
| H8C | 0.3508 | 0.8506 | 0.9752 | 0.073* | |
| C9 | 0.42126 (14) | 0.35590 (15) | 0.14246 (18) | 0.0316 (5) | |
| C10 | 0.46645 (14) | 0.26613 (14) | 0.19620 (17) | 0.0286 (5) | |
| C11 | 0.46841 (15) | 0.10400 (15) | 0.19300 (18) | 0.0315 (5) | |
| C12 | 0.43794 (18) | 0.01403 (16) | 0.1277 (2) | 0.0462 (6) | |
| H12A | 0.3870 | 0.0264 | 0.0593 | 0.069* | |
| H12B | 0.4220 | −0.0306 | 0.1780 | 0.069* | |
| H12C | 0.4851 | −0.0120 | 0.1036 | 0.069* |
| O1 | 0.0717 (13) | 0.0232 (8) | 0.0508 (11) | 0.0069 (8) | −0.0244 (9) | −0.0016 (7) |
| O2 | 0.0871 (15) | 0.0368 (10) | 0.0546 (12) | 0.0090 (10) | −0.0375 (11) | −0.0110 (9) |
| O3 | 0.0448 (10) | 0.0646 (12) | 0.0236 (8) | 0.0094 (9) | −0.0042 (7) | 0.0075 (8) |
| O4 | 0.0354 (10) | 0.0753 (14) | 0.0467 (11) | 0.0054 (9) | −0.0037 (8) | 0.0138 (9) |
| O5 | 0.0688 (12) | 0.0361 (9) | 0.0240 (8) | 0.0145 (9) | −0.0028 (8) | 0.0065 (7) |
| O6 | 0.0525 (11) | 0.0343 (9) | 0.0447 (10) | 0.0100 (8) | 0.0157 (8) | 0.0008 (7) |
| N1 | 0.0353 (10) | 0.0277 (9) | 0.0221 (9) | −0.0014 (8) | −0.0044 (8) | 0.0045 (7) |
| N2 | 0.0346 (10) | 0.0269 (9) | 0.0257 (9) | −0.0005 (8) | −0.0040 (8) | 0.0010 (7) |
| N3 | 0.0375 (10) | 0.0278 (9) | 0.0201 (9) | −0.0013 (8) | −0.0014 (7) | −0.0005 (7) |
| C1 | 0.0447 (13) | 0.0259 (11) | 0.0258 (11) | −0.0001 (10) | −0.0049 (10) | 0.0017 (9) |
| C2 | 0.0313 (11) | 0.0263 (11) | 0.0223 (10) | −0.0008 (9) | −0.0011 (8) | 0.0021 (8) |
| C3 | 0.0344 (12) | 0.0310 (11) | 0.0232 (11) | −0.0061 (9) | −0.0027 (9) | 0.0032 (8) |
| C4 | 0.0528 (16) | 0.0414 (13) | 0.0319 (13) | −0.0110 (12) | −0.0148 (11) | 0.0073 (10) |
| C5 | 0.0341 (13) | 0.0226 (11) | 0.0295 (12) | 0.0000 (9) | −0.0042 (9) | 0.0024 (8) |
| C6 | 0.0291 (11) | 0.0241 (10) | 0.0226 (10) | −0.0021 (9) | −0.0011 (8) | −0.0004 (8) |
| C7 | 0.0340 (12) | 0.0298 (11) | 0.0229 (11) | −0.0052 (9) | −0.0012 (9) | 0.0002 (8) |
| C8 | 0.0577 (16) | 0.0324 (13) | 0.0369 (14) | −0.0090 (11) | −0.0111 (12) | −0.0027 (10) |
| C9 | 0.0312 (11) | 0.0287 (11) | 0.0275 (11) | −0.0012 (9) | −0.0006 (9) | 0.0019 (9) |
| C10 | 0.0339 (11) | 0.0263 (11) | 0.0210 (10) | −0.0003 (9) | 0.0026 (8) | −0.0011 (8) |
| C11 | 0.0392 (12) | 0.0260 (11) | 0.0239 (11) | −0.0021 (9) | 0.0027 (9) | −0.0010 (8) |
| C12 | 0.0618 (16) | 0.0295 (12) | 0.0338 (13) | −0.0040 (11) | −0.0025 (11) | −0.0054 (10) |
| O1—C1 | 1.288 (3) | C3—C7 | 1.400 (3) |
| O1—H1 | 0.8200 | C3—C4 | 1.487 (3) |
| O2—C1 | 1.183 (3) | C4—H4A | 0.9600 |
| O3—C5 | 1.294 (3) | C4—H4B | 0.9600 |
| O3—H3 | 0.8200 | C4—H4C | 0.9600 |
| O4—C5 | 1.187 (3) | C5—C6 | 1.505 (3) |
| O5—C9 | 1.307 (3) | C7—C8 | 1.482 (3) |
| O5—H5 | 0.8200 | C8—H8A | 0.9600 |
| O6—C9 | 1.192 (3) | C8—H8B | 0.9600 |
| N1—C3 | 1.322 (3) | C8—H8C | 0.9600 |
| N1—C2 | 1.336 (3) | C9—C10 | 1.489 (3) |
| N2—C7 | 1.330 (3) | C10—C10i | 1.377 (4) |
| N2—C6 | 1.333 (3) | C11—C11i | 1.405 (4) |
| N3—C11 | 1.323 (3) | C11—C12 | 1.482 (3) |
| N3—C10 | 1.333 (3) | C12—H12A | 0.9600 |
| C1—C2 | 1.484 (3) | C12—H12B | 0.9600 |
| C2—C6 | 1.372 (3) | C12—H12C | 0.9600 |
| C1—O1—H1 | 109.5 | C2—C6—C5 | 124.95 (18) |
| C5—O3—H3 | 109.5 | N2—C7—C3 | 120.76 (18) |
| C9—O5—H5 | 109.5 | N2—C7—C8 | 118.06 (19) |
| C3—N1—C2 | 117.91 (17) | C3—C7—C8 | 121.17 (19) |
| C7—N2—C6 | 117.82 (18) | C7—C8—H8A | 109.5 |
| C11—N3—C10 | 118.29 (17) | C7—C8—H8B | 109.5 |
| O2—C1—O1 | 124.0 (2) | H8A—C8—H8B | 109.5 |
| O2—C1—C2 | 121.3 (2) | C7—C8—H8C | 109.5 |
| O1—C1—C2 | 114.60 (18) | H8A—C8—H8C | 109.5 |
| N1—C2—C6 | 121.33 (18) | H8B—C8—H8C | 109.5 |
| N1—C2—C1 | 119.07 (18) | O6—C9—O5 | 126.0 (2) |
| C6—C2—C1 | 119.54 (18) | O6—C9—C10 | 121.38 (19) |
| N1—C3—C7 | 120.89 (18) | O5—C9—C10 | 112.56 (19) |
| N1—C3—C4 | 118.57 (19) | N3—C10—C10i | 120.98 (11) |
| C7—C3—C4 | 120.54 (19) | N3—C10—C9 | 117.57 (18) |
| C3—C4—H4A | 109.5 | C10i—C10—C9 | 121.30 (11) |
| C3—C4—H4B | 109.5 | N3—C11—C11i | 120.57 (11) |
| H4A—C4—H4B | 109.5 | N3—C11—C12 | 118.19 (19) |
| C3—C4—H4C | 109.5 | C11i—C11—C12 | 121.23 (13) |
| H4A—C4—H4C | 109.5 | C11—C12—H12A | 109.5 |
| H4B—C4—H4C | 109.5 | C11—C12—H12B | 109.5 |
| O4—C5—O3 | 126.7 (2) | H12A—C12—H12B | 109.5 |
| O4—C5—C6 | 120.7 (2) | C11—C12—H12C | 109.5 |
| O3—C5—C6 | 112.4 (2) | H12A—C12—H12C | 109.5 |
| N2—C6—C2 | 121.28 (18) | H12B—C12—H12C | 109.5 |
| N2—C6—C5 | 113.73 (17) | ||
| C3—N1—C2—C6 | 0.0 (3) | O4—C5—C6—C2 | 93.3 (3) |
| C3—N1—C2—C1 | 177.4 (2) | O3—C5—C6—C2 | −91.5 (3) |
| O2—C1—C2—N1 | 169.2 (3) | C6—N2—C7—C3 | 0.4 (3) |
| O1—C1—C2—N1 | −8.3 (3) | C6—N2—C7—C8 | −179.0 (2) |
| O2—C1—C2—C6 | −13.3 (4) | N1—C3—C7—N2 | 0.0 (3) |
| O1—C1—C2—C6 | 169.1 (2) | C4—C3—C7—N2 | −180.0 (2) |
| C2—N1—C3—C7 | −0.2 (3) | N1—C3—C7—C8 | 179.4 (2) |
| C2—N1—C3—C4 | 179.8 (2) | C4—C3—C7—C8 | −0.6 (4) |
| C7—N2—C6—C2 | −0.6 (3) | C11—N3—C10—C10i | 3.0 (4) |
| C7—N2—C6—C5 | 177.3 (2) | C11—N3—C10—C9 | −172.7 (2) |
| N1—C2—C6—N2 | 0.5 (3) | O6—C9—C10—N3 | 134.4 (2) |
| C1—C2—C6—N2 | −177.0 (2) | O5—C9—C10—N3 | −44.4 (3) |
| N1—C2—C6—C5 | −177.3 (2) | O6—C9—C10—C10i | −41.3 (4) |
| C1—C2—C6—C5 | 5.3 (3) | O5—C9—C10—C10i | 140.0 (3) |
| O4—C5—C6—N2 | −84.5 (3) | C10—N3—C11—C11i | 2.3 (4) |
| O3—C5—C6—N2 | 90.6 (2) | C10—N3—C11—C12 | −176.5 (2) |
| H··· | ||||
| O1—H1···N2ii | 0.82 (1) | 2.04 | 2.845 (2) | 167. |
| O3—H3···N3iii | 0.82 (1) | 2.00 | 2.803 (2) | 165. |
| O5—H5···N1iv | 0.82 (1) | 2.06 | 2.874 (2) | 169. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N2i | 0.82 (1) | 2.04 | 2.845 (2) | 167 |
| O3—H3⋯N3ii | 0.82 (1) | 2.00 | 2.803 (2) | 165 |
| O5—H5⋯N1iii | 0.82 (1) | 2.06 | 2.874 (2) | 169 |
Symmetry codes: (i) ; (ii) ; (iii) .