| Literature DB >> 22259413 |
Chao Ma, Zhen-Zhong Wang, Li Pan, Yu Tian, Wei Xiao.
Abstract
The title compound, C(12)H(11)BrN(2)O(2), was prepared by an intra-cyclization reaction of (S)-1-(5-bromo-2-nitro-benz-yl)-5-oxopyrrolidine-2-carb-oxy-lic acid methyl ester in the presence of EtOH/Fe. The five-membered pyrrolidinone ring adopts an approximate envelope conformation, while the seven-membered diazepanone ring displays a twisted boat conformation. Inter-molecular classical N-H⋯O hydrogen bonds and weak C-H⋯O inter-actions help to stabilize the crystal structure.Entities:
Year: 2011 PMID: 22259413 PMCID: PMC3254472 DOI: 10.1107/S1600536811052962
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H11BrN2O2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 3967 reflections |
| θ = 2.6–26.0° | |
| µ = 3.58 mm−1 | |
| Plate, colorless | |
| 0.22 × 0.18 × 0.07 mm |
| Bruker APEX CCD area-detector diffractometer | 2244 independent reflections |
| Radiation source: fine-focus sealed tube | 2074 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 7012 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2244 reflections | Δρmax = 0.49 e Å−3 |
| 154 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 884 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.007 (9) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.25401 (6) | 0.050666 (16) | 0.521650 (10) | 0.04269 (9) | |
| O1 | 1.0495 (4) | 0.02986 (12) | 0.85625 (8) | 0.0421 (4) | |
| O2 | 0.9421 (4) | 0.41192 (12) | 0.82097 (8) | 0.0443 (4) | |
| N1 | 0.8206 (4) | 0.16602 (12) | 0.80547 (8) | 0.0238 (4) | |
| N2 | 0.7499 (5) | 0.35871 (11) | 0.72148 (7) | 0.0275 (3) | |
| H2 | 0.8076 | 0.4163 | 0.7027 | 0.033* | |
| C1 | 0.8919 (5) | 0.10757 (16) | 0.85843 (11) | 0.0301 (5) | |
| C2 | 0.7399 (7) | 0.15233 (16) | 0.92027 (10) | 0.0388 (5) | |
| H2A | 0.8826 | 0.1537 | 0.9588 | 0.047* | |
| H2B | 0.5574 | 0.1123 | 0.9329 | 0.047* | |
| C3 | 0.6517 (5) | 0.26009 (17) | 0.89928 (10) | 0.0322 (5) | |
| H3A | 0.8033 | 0.3101 | 0.9157 | 0.039* | |
| H3B | 0.4489 | 0.2785 | 0.9175 | 0.039* | |
| C4 | 0.6457 (4) | 0.25772 (15) | 0.82215 (10) | 0.0253 (5) | |
| H4 | 0.4310 | 0.2502 | 0.8060 | 0.030* | |
| C5 | 0.9226 (5) | 0.14577 (17) | 0.73654 (10) | 0.0249 (4) | |
| H5A | 0.9572 | 0.0717 | 0.7312 | 0.030* | |
| H5B | 1.1195 | 0.1808 | 0.7289 | 0.030* | |
| C6 | 0.6986 (4) | 0.18057 (14) | 0.68438 (9) | 0.0214 (4) | |
| C7 | 0.6198 (5) | 0.28407 (15) | 0.67832 (10) | 0.0240 (4) | |
| C8 | 0.7940 (5) | 0.35007 (14) | 0.78876 (10) | 0.0276 (4) | |
| C9 | 0.5797 (5) | 0.11109 (15) | 0.63852 (10) | 0.0233 (4) | |
| H9 | 0.6271 | 0.0407 | 0.6424 | 0.028* | |
| C10 | 0.3923 (5) | 0.14489 (17) | 0.58721 (10) | 0.0267 (4) | |
| C11 | 0.3113 (5) | 0.24598 (17) | 0.58081 (10) | 0.0295 (5) | |
| H11 | 0.1805 | 0.2676 | 0.5455 | 0.035* | |
| C12 | 0.4250 (5) | 0.31536 (17) | 0.62704 (11) | 0.0291 (5) | |
| H12 | 0.3692 | 0.3851 | 0.6237 | 0.035* |
| Br1 | 0.06219 (16) | 0.03517 (14) | 0.03072 (13) | 0.00004 (16) | −0.01668 (12) | −0.00718 (8) |
| O1 | 0.0678 (12) | 0.0294 (9) | 0.0292 (9) | 0.0169 (9) | −0.0064 (8) | 0.0009 (7) |
| O2 | 0.0671 (12) | 0.0285 (9) | 0.0374 (10) | −0.0143 (9) | −0.0088 (9) | −0.0034 (7) |
| N1 | 0.0321 (10) | 0.0195 (8) | 0.0199 (8) | 0.0021 (7) | 0.0005 (7) | −0.0026 (6) |
| N2 | 0.0391 (9) | 0.0173 (7) | 0.0262 (8) | −0.0044 (10) | 0.0027 (9) | −0.0003 (6) |
| C1 | 0.0400 (12) | 0.0244 (11) | 0.0261 (12) | −0.0031 (10) | −0.0012 (10) | −0.0022 (9) |
| C2 | 0.0597 (13) | 0.0332 (11) | 0.0235 (10) | 0.0038 (16) | 0.0059 (14) | 0.0014 (8) |
| C3 | 0.0411 (13) | 0.0314 (12) | 0.0241 (11) | 0.0036 (9) | 0.0040 (9) | −0.0054 (9) |
| C4 | 0.0293 (11) | 0.0230 (10) | 0.0236 (10) | 0.0028 (8) | 0.0022 (8) | −0.0028 (8) |
| C5 | 0.0268 (11) | 0.0250 (10) | 0.0229 (10) | 0.0004 (9) | 0.0013 (8) | −0.0031 (9) |
| C6 | 0.0230 (11) | 0.0221 (9) | 0.0190 (9) | 0.0013 (8) | 0.0077 (8) | 0.0005 (7) |
| C7 | 0.0288 (10) | 0.0202 (10) | 0.0231 (10) | −0.0035 (8) | 0.0048 (9) | 0.0011 (8) |
| C8 | 0.0316 (12) | 0.0195 (9) | 0.0318 (11) | 0.0024 (10) | 0.0010 (9) | −0.0039 (8) |
| C9 | 0.0273 (10) | 0.0202 (10) | 0.0226 (10) | −0.0005 (8) | 0.0028 (9) | −0.0010 (8) |
| C10 | 0.0313 (10) | 0.0271 (11) | 0.0218 (11) | −0.0033 (9) | 0.0014 (9) | −0.0043 (9) |
| C11 | 0.0359 (13) | 0.0320 (11) | 0.0205 (10) | 0.0047 (10) | −0.0015 (9) | 0.0051 (8) |
| C12 | 0.0383 (12) | 0.0219 (11) | 0.0271 (12) | 0.0035 (9) | 0.0050 (10) | 0.0029 (9) |
| Br1—C10 | 1.896 (2) | C3—H3B | 0.9900 |
| O1—C1 | 1.233 (3) | C4—C8 | 1.527 (3) |
| O2—C8 | 1.221 (2) | C4—H4 | 1.0000 |
| N1—C1 | 1.339 (3) | C5—C6 | 1.500 (3) |
| N1—C4 | 1.465 (2) | C5—H5A | 0.9900 |
| N1—C5 | 1.465 (3) | C5—H5B | 0.9900 |
| N2—C8 | 1.356 (2) | C6—C9 | 1.391 (3) |
| N2—C7 | 1.422 (3) | C6—C7 | 1.406 (3) |
| N2—H2 | 0.8800 | C7—C12 | 1.392 (3) |
| C1—C2 | 1.517 (3) | C9—C10 | 1.383 (3) |
| C2—C3 | 1.524 (3) | C9—H9 | 0.9500 |
| C2—H2A | 0.9900 | C10—C11 | 1.379 (3) |
| C2—H2B | 0.9900 | C11—C12 | 1.386 (3) |
| C3—C4 | 1.533 (3) | C11—H11 | 0.9500 |
| C3—H3A | 0.9900 | C12—H12 | 0.9500 |
| C1—N1—C4 | 114.51 (16) | N1—C5—C6 | 113.00 (16) |
| C1—N1—C5 | 124.01 (17) | N1—C5—H5A | 109.0 |
| C4—N1—C5 | 121.36 (15) | C6—C5—H5A | 109.0 |
| C8—N2—C7 | 126.49 (16) | N1—C5—H5B | 109.0 |
| C8—N2—H2 | 116.8 | C6—C5—H5B | 109.0 |
| C7—N2—H2 | 116.8 | H5A—C5—H5B | 107.8 |
| O1—C1—N1 | 125.2 (2) | C9—C6—C7 | 118.99 (18) |
| O1—C1—C2 | 126.5 (2) | C9—C6—C5 | 119.95 (17) |
| N1—C1—C2 | 108.19 (18) | C7—C6—C5 | 120.95 (18) |
| C1—C2—C3 | 104.43 (17) | C12—C7—C6 | 119.90 (19) |
| C1—C2—H2A | 110.9 | C12—C7—N2 | 119.02 (18) |
| C3—C2—H2A | 110.9 | C6—C7—N2 | 120.98 (18) |
| C1—C2—H2B | 110.9 | O2—C8—N2 | 122.50 (19) |
| C3—C2—H2B | 110.9 | O2—C8—C4 | 121.76 (18) |
| H2A—C2—H2B | 108.9 | N2—C8—C4 | 115.73 (17) |
| C2—C3—C4 | 105.02 (17) | C10—C9—C6 | 119.74 (19) |
| C2—C3—H3A | 110.7 | C10—C9—H9 | 120.1 |
| C4—C3—H3A | 110.7 | C6—C9—H9 | 120.1 |
| C2—C3—H3B | 110.7 | C11—C10—C9 | 121.97 (19) |
| C4—C3—H3B | 110.7 | C11—C10—Br1 | 118.79 (15) |
| H3A—C3—H3B | 108.8 | C9—C10—Br1 | 119.20 (16) |
| N1—C4—C8 | 109.27 (16) | C10—C11—C12 | 118.56 (19) |
| N1—C4—C3 | 103.52 (16) | C10—C11—H11 | 120.7 |
| C8—C4—C3 | 114.27 (17) | C12—C11—H11 | 120.7 |
| N1—C4—H4 | 109.9 | C11—C12—C7 | 120.8 (2) |
| C8—C4—H4 | 109.9 | C11—C12—H12 | 119.6 |
| C3—C4—H4 | 109.9 | C7—C12—H12 | 119.6 |
| H··· | ||||
| N2—H2···O1i | 0.88 | 2.00 | 2.864 (2) | 169. |
| C5—H5A···O2ii | 0.99 | 2.38 | 3.328 (3) | 160. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1i | 0.88 | 2.00 | 2.864 (2) | 169 |
| C5—H5 | 0.99 | 2.38 | 3.328 (3) | 160 |
Symmetry codes: (i) ; (ii) .