Literature DB >> 22259404

2,3-Dibromo-6-meth-oxy-4-[(phenethyl-amino)-methyl-idene]cyclo-hexa-2,5-dien-1-one methanol monosolvate.

Rong-Bao Ge1, Yue-Hu Chen, Feng-Ting Wang, Shuang-Shuang Wang, Shao-Song Qian.   

Abstract

In the title compound, C(16)H(15)Br(2)NO(2)·CH(4)O, the mean planes of the substituted cyclo-hexa-2,5-dien-1-one and phenyl rings are almost parallel [dihedral angle = 7.84 (4)°]. The crystal packing is stabilized by N-H⋯O hydrogen bonds generating infinite [101] chains. The methanol solvent mol-ecules are connected with the main species by O-H⋯O inter-actions.

Entities:  

Year:  2011        PMID: 22259404      PMCID: PMC3254464          DOI: 10.1107/S1600536811052895

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to bromo­phenols and their bioactivity, see: Liu et al. (2011 ▶). For related structures, see: Palmer et al. (1973 ▶); Li et al. (1995 ▶); Huang et al. (2006 ▶). For structural and theoretical aspects on the keto-enol equilibrium of salicyl­aldehyde Schiff bases, see: Chatziefthimiou et al. (2006 ▶).

Experimental

Crystal data

C16H15Br2NO2·CH4O M = 445.15 Monoclinic, a = 8.752 (6) Å b = 16.308 (10) Å c = 13.001 (8) Å β = 104.047 (6)° V = 1800 (2) Å3 Z = 4 Mo Kα radiation μ = 4.52 mm−1 T = 296 K 0.25 × 0.22 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.337, T max = 0.406 8282 measured reflections 3292 independent reflections 1674 reflections with I > 2σ(I) R int = 0.072

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.133 S = 1.00 3292 reflections 211 parameters H-atom parameters constrained Δρmax = 0.62 e Å−3 Δρmin = −0.60 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811052895/zq2143sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052895/zq2143Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811052895/zq2143Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15Br2NO2·CH4OZ = 4
Mr = 445.15F(000) = 888
Monoclinic, P21/nDx = 1.643 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 8.752 (6) ŵ = 4.52 mm1
b = 16.308 (10) ÅT = 296 K
c = 13.001 (8) ÅBlock, yellow
β = 104.047 (6)°0.25 × 0.22 × 0.20 mm
V = 1800 (2) Å3
Bruker APEXII CCD diffractometer3292 independent reflections
Radiation source: fine-focus sealed tube1674 reflections with I > 2σ(I)
graphiteRint = 0.072
φ and ω scansθmax = 25.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −10→10
Tmin = 0.337, Tmax = 0.406k = −19→14
8282 measured reflectionsl = −12→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.133w = 1/[σ2(Fo2) + (0.0388P)2 + 2.4528P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max = 0.001
3292 reflectionsΔρmax = 0.62 e Å3
211 parametersΔρmin = −0.60 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0103 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.50517 (10)0.54245 (5)0.37790 (6)0.0638 (3)
Br20.78645 (10)0.65471 (6)0.52622 (6)0.0728 (3)
O10.9067 (5)0.7788 (3)0.3957 (3)0.0515 (13)
O20.8183 (6)0.8146 (3)0.1919 (3)0.0544 (13)
O30.1533 (9)0.8797 (5)0.3731 (6)0.129 (3)
H30.10900.83840.38730.193*
N10.3484 (6)0.6175 (3)0.0466 (4)0.0429 (15)
H10.38480.65720.01620.051*
C10.5918 (7)0.6306 (4)0.3183 (5)0.0401 (17)
C20.7125 (8)0.6750 (4)0.3797 (5)0.0404 (17)
C30.7919 (8)0.7392 (4)0.3400 (5)0.0373 (16)
C40.7342 (7)0.7544 (4)0.2277 (5)0.0363 (16)
C50.6117 (7)0.7126 (4)0.1670 (5)0.0385 (17)
H50.57640.72600.09560.046*
C60.5359 (7)0.6489 (4)0.2093 (5)0.0347 (16)
C70.4111 (7)0.6048 (4)0.1455 (5)0.0375 (16)
H70.36940.56230.17780.045*
C80.2192 (8)0.5689 (5)−0.0177 (5)0.054 (2)
H8A0.13690.6054−0.05530.065*
H8B0.17490.53420.02830.065*
C90.2756 (8)0.5160 (5)−0.0969 (6)0.061 (2)
H9A0.32380.5506−0.14100.074*
H9B0.35510.4781−0.05910.074*
C100.1429 (8)0.4687 (5)−0.1657 (6)0.0500 (19)
C110.0749 (9)0.4913 (5)−0.2688 (6)0.061 (2)
H110.11260.5374−0.29680.074*
C12−0.0470 (10)0.4476 (6)−0.3314 (7)0.080 (3)
H12−0.09060.4644−0.40070.096*
C13−0.1036 (10)0.3802 (6)−0.2923 (7)0.070 (3)
H13−0.18450.3497−0.33480.084*
C14−0.0414 (9)0.3580 (5)−0.1913 (7)0.067 (2)
H14−0.08130.3124−0.16360.080*
C150.0808 (8)0.4018 (5)−0.1279 (6)0.055 (2)
H150.12150.3854−0.05810.066*
C170.2388 (12)0.8606 (7)0.3029 (8)0.108 (4)
H17A0.30990.90470.29920.162*
H17B0.16950.85200.23420.162*
H17C0.29790.81150.32540.162*
C160.7803 (10)0.8284 (5)0.0801 (6)0.075 (3)
H16A0.79630.77880.04440.112*
H16B0.84680.87080.06390.112*
H16C0.67210.84490.05680.112*
U11U22U33U12U13U23
Br10.0743 (6)0.0668 (6)0.0470 (5)−0.0142 (5)0.0082 (4)0.0219 (4)
Br20.0894 (7)0.0934 (7)0.0260 (4)−0.0155 (5)−0.0043 (4)0.0126 (4)
O10.059 (3)0.059 (3)0.031 (3)−0.010 (3)0.001 (2)−0.010 (2)
O20.072 (3)0.058 (3)0.031 (3)−0.023 (3)0.008 (3)−0.003 (2)
O30.127 (6)0.181 (8)0.090 (5)−0.085 (6)0.049 (5)−0.052 (6)
N10.047 (3)0.048 (4)0.029 (3)−0.004 (3)0.001 (3)−0.001 (3)
C10.039 (4)0.047 (4)0.033 (4)0.008 (3)0.008 (3)0.006 (3)
C20.051 (4)0.046 (4)0.023 (3)0.007 (4)0.006 (3)0.003 (3)
C30.042 (4)0.041 (4)0.028 (4)0.003 (3)0.007 (3)−0.006 (3)
C40.043 (4)0.038 (4)0.029 (4)−0.001 (3)0.012 (3)0.001 (3)
C50.041 (4)0.048 (4)0.022 (3)0.003 (3)−0.001 (3)0.001 (3)
C60.036 (4)0.038 (4)0.029 (4)0.002 (3)0.006 (3)0.000 (3)
C70.043 (4)0.040 (4)0.031 (4)0.002 (3)0.011 (3)0.002 (3)
C80.051 (4)0.067 (5)0.042 (4)−0.008 (4)0.009 (4)−0.009 (4)
C90.047 (5)0.081 (6)0.057 (5)−0.012 (4)0.014 (4)−0.024 (4)
C100.040 (4)0.057 (5)0.051 (5)0.001 (4)0.007 (4)−0.020 (4)
C110.076 (6)0.060 (5)0.046 (5)−0.005 (5)0.012 (5)−0.008 (4)
C120.085 (7)0.089 (7)0.052 (5)0.006 (6)−0.008 (5)−0.019 (5)
C130.060 (6)0.070 (6)0.073 (7)0.001 (5)0.004 (5)−0.033 (5)
C140.062 (5)0.062 (6)0.080 (7)−0.007 (4)0.022 (5)−0.018 (5)
C150.055 (5)0.060 (5)0.048 (5)−0.006 (4)0.010 (4)−0.009 (4)
C170.111 (9)0.129 (9)0.095 (8)−0.031 (7)0.048 (7)−0.020 (7)
C160.096 (7)0.081 (6)0.043 (5)−0.031 (5)0.010 (5)0.012 (4)
Br1—C11.878 (7)C8—H8B0.9700
Br2—C21.886 (6)C9—C101.497 (9)
O1—C31.263 (7)C9—H9A0.9700
O2—C41.374 (7)C9—H9B0.9700
O2—C161.428 (8)C10—C151.363 (10)
O3—C171.350 (10)C10—C111.377 (9)
O3—H30.8200C11—C121.373 (10)
N1—C71.286 (7)C11—H110.9300
N1—C81.465 (8)C12—C131.355 (11)
N1—H10.8600C12—H120.9300
C1—C21.366 (9)C13—C141.344 (11)
C1—C61.414 (8)C13—H130.9300
C2—C31.422 (9)C14—C151.380 (10)
C3—C41.445 (8)C14—H140.9300
C4—C51.352 (8)C15—H150.9300
C5—C61.414 (8)C17—H17A0.9600
C5—H50.9300C17—H17B0.9600
C6—C71.399 (8)C17—H17C0.9600
C7—H70.9300C16—H16A0.9600
C8—C91.514 (9)C16—H16B0.9600
C8—H8A0.9700C16—H16C0.9600
C4—O2—C16116.5 (5)C8—C9—H9A109.3
C17—O3—H3109.5C10—C9—H9B109.3
C7—N1—C8124.5 (6)C8—C9—H9B109.3
C7—N1—H1117.7H9A—C9—H9B108.0
C8—N1—H1117.7C15—C10—C11116.6 (7)
C2—C1—C6120.3 (6)C15—C10—C9121.1 (7)
C2—C1—Br1119.8 (5)C11—C10—C9122.3 (7)
C6—C1—Br1119.9 (5)C12—C11—C10121.9 (8)
C1—C2—C3123.7 (6)C12—C11—H11119.0
C1—C2—Br2121.6 (5)C10—C11—H11119.0
C3—C2—Br2114.7 (5)C13—C12—C11120.0 (8)
O1—C3—C2124.0 (6)C13—C12—H12120.0
O1—C3—C4121.7 (6)C11—C12—H12120.0
C2—C3—C4114.3 (6)C14—C13—C12119.1 (8)
C5—C4—O2125.2 (6)C14—C13—H13120.4
C5—C4—C3122.5 (6)C12—C13—H13120.4
O2—C4—C3112.3 (5)C13—C14—C15121.0 (8)
C4—C5—C6121.6 (6)C13—C14—H14119.5
C4—C5—H5119.2C15—C14—H14119.5
C6—C5—H5119.2C10—C15—C14121.2 (7)
C7—C6—C5121.3 (6)C10—C15—H15119.4
C7—C6—C1121.1 (6)C14—C15—H15119.4
C5—C6—C1117.6 (6)O3—C17—H17A109.5
N1—C7—C6126.3 (6)O3—C17—H17B109.5
N1—C7—H7116.9H17A—C17—H17B109.5
C6—C7—H7116.9O3—C17—H17C109.5
N1—C8—C9111.2 (6)H17A—C17—H17C109.5
N1—C8—H8A109.4H17B—C17—H17C109.5
C9—C8—H8A109.4O2—C16—H16A109.5
N1—C8—H8B109.4O2—C16—H16B109.5
C9—C8—H8B109.4H16A—C16—H16B109.5
H8A—C8—H8B108.0O2—C16—H16C109.5
C10—C9—C8111.5 (6)H16A—C16—H16C109.5
C10—C9—H9A109.3H16B—C16—H16C109.5
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.861.932.731 (7)154.
O3—H3···O1ii0.822.052.786 (8)150.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.861.932.731 (7)154
O3—H3⋯O1ii0.822.052.786 (8)150

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Keto forms of salicylaldehyde Schiff bases: structural and theoretical aspects.

Authors:  Spyros D Chatziefthimiou; Yannis G Lazarou; Eugene Hadjoudis; Tereza Dziembowska; Irene M Mavridis
Journal:  J Phys Chem B       Date:  2006-11-30       Impact factor: 2.991

Review 3.  Bromophenols in marine algae and their bioactivities.

Authors:  Ming Liu; Poul Erik Hansen; Xiukun Lin
Journal:  Mar Drugs       Date:  2011-07-22       Impact factor: 6.085

  3 in total

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