Literature DB >> 22259402

Methyl 2-[2-(tert-but-oxy-carbonyl-amino)-1,3-benzothia-zole-6-carboxamido]-acetate.

Dan Gao1, Xing Fang, Hai-Yang Yu, Jun-Dong Wang.   

Abstract

In the title compound, C(16)H(19)N(3)O(5)S, the dihedral angle between the benzene ring and the carbonyl-amino group is 18.18 (2)°. In the crystal, mol-ecules form centrosymmetric dimers via pairs of N-H⋯N hydrogen bonds. The dimers are connected via N-H⋯O hydrogen bonds into a three-dimensional network..

Entities:  

Year:  2011        PMID: 22259402      PMCID: PMC3254462          DOI: 10.1107/S1600536811052421

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For benzothia­zole derivatives with anti-tumor activity, see: Brantley et al. (2004 ▶); Ćaleta et al. (2009 ▶); Mortimer et al. (2006 ▶) and for benzothia­zolines with anti-tuberculous properties, see: Palmer et al. (1971 ▶). For related benzothia­zole structures, see: Lynch et al. (2002 ▶); Matković-Čalogović et al. (2003 ▶); Lei et al. (2010 ▶).

Experimental

Crystal data

C16H19N3O5S M = 365.41 Monoclinic, a = 16.861 (3) Å b = 11.317 (2) Å c = 9.6484 (19) Å β = 98.94 (3)° V = 1818.7 (6) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 293 K 0.54 × 0.33 × 0.12 mm

Data collection

Rigaku Saturn 724 CCD area-detector diffractometer Absorption correction: numerical (NUMABS; Higashi, 2000 ▶) T min = 0.921, T max = 0.975 14817 measured reflections 4176 independent reflections 3718 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.083 wR(F 2) = 0.180 S = 1.26 4176 reflections 230 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrystalClear (Rigaku, 2007 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEX (McArdle, 1995 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811052421/ff2042sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052421/ff2042Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811052421/ff2042Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H19N3O5SF(000) = 768.0
Mr = 365.41Dx = 1.335 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5508 reflections
a = 16.861 (3) Åθ = 3.0–27.5°
b = 11.317 (2) ŵ = 0.21 mm1
c = 9.6484 (19) ÅT = 293 K
β = 98.94 (3)°Prism, colourless
V = 1818.7 (6) Å30.54 × 0.33 × 0.12 mm
Z = 4
Rigaku Saturn 724 CCD area-detector diffractometer4176 independent reflections
Radiation source: fine-focus sealed tube3718 reflections with I > 2σ(I)
graphiteRint = 0.054
Detector resolution: 28.5714 pixels mm-1θmax = 27.5°, θmin = 3.0°
dtprofit.ref scansh = −20→21
Absorption correction: numerical (NUMABS; Higashi, 2000)k = −14→14
Tmin = 0.921, Tmax = 0.975l = −12→12
14817 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.083Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.180H-atom parameters constrained
S = 1.26w = 1/[σ2(Fo2) + (0.0486P)2 + 1.240P] where P = (Fo2 + 2Fc2)/3
4176 reflections(Δ/σ)max < 0.001
230 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.36614 (4)0.72248 (7)0.16296 (8)0.0467 (2)
O30.05637 (13)0.7065 (2)−0.3160 (2)0.0637 (7)
O4−0.06380 (16)0.6314 (3)−0.0995 (3)0.0789 (8)
O20.49650 (13)0.7178 (2)0.3633 (2)0.0574 (6)
O10.60458 (12)0.59926 (19)0.3591 (2)0.0479 (5)
O5−0.16027 (18)0.7431 (4)−0.2127 (5)0.1271 (15)
N10.50500 (13)0.5954 (2)0.1795 (2)0.0415 (6)
H10.53630.54900.14260.050*
N20.40231 (13)0.5568 (2)−0.0059 (2)0.0377 (5)
N30.05095 (15)0.7905 (3)−0.1077 (3)0.0524 (7)
H30.07560.8095−0.02590.063*
C90.21789 (16)0.7285 (3)−0.0217 (3)0.0431 (7)
H90.19850.78900.02900.052*
C30.5917 (3)0.5968 (4)0.6084 (4)0.0761 (12)
H3A0.54410.64480.59450.114*
H3B0.61990.60890.70170.114*
H3C0.57700.51510.59620.114*
C15−0.0922 (2)0.7299 (4)−0.1594 (4)0.0696 (11)
C16−0.1190 (3)0.5336 (5)−0.1009 (7)0.133 (2)
H16A−0.16400.5574−0.05780.199*
H16B−0.09220.4684−0.04980.199*
H16C−0.13730.5100−0.19600.199*
C10.7200 (2)0.5557 (4)0.5209 (4)0.0855 (14)
H1A0.70530.47400.50870.128*
H1B0.74970.56730.61320.128*
H1C0.75260.57810.45210.128*
C60.43024 (16)0.6160 (2)0.1075 (3)0.0372 (6)
C70.32479 (16)0.5921 (2)−0.0557 (3)0.0363 (6)
C100.17080 (16)0.6823 (3)−0.1401 (3)0.0409 (6)
C80.29461 (16)0.6830 (2)0.0201 (3)0.0384 (6)
C120.27640 (17)0.5443 (3)−0.1727 (3)0.0427 (7)
H120.29510.4828−0.22280.051*
C110.20071 (17)0.5895 (3)−0.2130 (3)0.0440 (7)
H110.16840.5575−0.29090.053*
C130.08877 (18)0.7271 (3)−0.1946 (3)0.0460 (7)
C50.53326 (17)0.6445 (3)0.3083 (3)0.0419 (6)
C40.64493 (19)0.6309 (3)0.5033 (3)0.0484 (7)
C14−0.03095 (19)0.8269 (4)−0.1511 (4)0.0637 (10)
H14A−0.03500.8638−0.24270.076*
H14B−0.04410.8864−0.08600.076*
C20.6663 (2)0.7601 (3)0.5084 (4)0.0668 (10)
H2A0.69740.77770.43560.100*
H2B0.69720.77850.59800.100*
H2C0.61810.80650.49470.100*
U11U22U33U12U13U23
S10.0417 (4)0.0507 (5)0.0453 (4)0.0087 (3)−0.0005 (3)−0.0150 (3)
O30.0521 (13)0.096 (2)0.0399 (12)0.0100 (13)−0.0022 (10)−0.0002 (12)
O40.0595 (16)0.095 (2)0.0791 (18)−0.0064 (15)0.0023 (14)0.0225 (16)
O20.0514 (13)0.0652 (15)0.0529 (13)0.0140 (11)−0.0002 (10)−0.0218 (11)
O10.0480 (11)0.0523 (13)0.0397 (11)0.0121 (9)−0.0045 (9)−0.0131 (9)
O50.0533 (18)0.141 (3)0.172 (4)0.0003 (19)−0.029 (2)0.035 (3)
N10.0374 (12)0.0463 (14)0.0399 (12)0.0078 (10)0.0028 (10)−0.0081 (10)
N20.0387 (12)0.0367 (12)0.0376 (12)0.0003 (9)0.0053 (10)−0.0051 (10)
N30.0409 (14)0.0684 (19)0.0456 (14)0.0096 (12)−0.0003 (11)−0.0011 (13)
C90.0388 (15)0.0472 (17)0.0439 (15)0.0045 (12)0.0080 (12)−0.0043 (13)
C30.103 (3)0.079 (3)0.0425 (19)−0.007 (2)0.003 (2)0.0012 (19)
C150.0423 (19)0.099 (3)0.065 (2)0.0063 (19)0.0001 (16)0.007 (2)
C160.097 (4)0.135 (5)0.160 (6)−0.038 (4)0.000 (4)0.054 (5)
C10.085 (3)0.092 (3)0.067 (2)0.040 (2)−0.029 (2)−0.028 (2)
C60.0377 (14)0.0371 (14)0.0367 (14)0.0016 (11)0.0049 (11)−0.0013 (11)
C70.0362 (14)0.0352 (14)0.0377 (14)−0.0004 (11)0.0064 (11)−0.0003 (11)
C100.0381 (14)0.0473 (17)0.0374 (14)−0.0010 (12)0.0064 (11)0.0013 (12)
C80.0372 (14)0.0384 (15)0.0392 (14)0.0007 (11)0.0050 (11)−0.0016 (12)
C120.0445 (16)0.0406 (16)0.0428 (15)0.0016 (12)0.0059 (12)−0.0043 (13)
C110.0441 (16)0.0492 (17)0.0371 (14)−0.0039 (13)0.0013 (12)−0.0023 (13)
C130.0409 (16)0.0563 (19)0.0400 (15)0.0027 (13)0.0037 (12)0.0069 (14)
C50.0397 (15)0.0447 (16)0.0407 (15)0.0016 (12)0.0048 (12)−0.0061 (13)
C40.0539 (18)0.0501 (18)0.0372 (15)0.0083 (14)−0.0057 (13)−0.0104 (13)
C140.0473 (18)0.074 (3)0.067 (2)0.0189 (17)0.0000 (16)0.0019 (19)
C20.065 (2)0.059 (2)0.071 (2)−0.0095 (17)−0.0060 (18)−0.0116 (19)
S1—C81.742 (3)C3—H3C0.9600
S1—C61.757 (3)C15—C141.501 (6)
O3—C131.235 (4)C16—H16A0.9600
O4—C151.312 (5)C16—H16B0.9600
O4—C161.444 (5)C16—H16C0.9600
O2—C51.207 (3)C1—C41.513 (4)
O1—C51.329 (3)C1—H1A0.9600
O1—C41.494 (3)C1—H1B0.9600
O5—C151.191 (4)C1—H1C0.9600
N1—C61.362 (3)C7—C121.395 (4)
N1—C51.377 (3)C7—C81.403 (4)
N1—H10.8600C10—C111.401 (4)
N2—C61.307 (3)C10—C131.490 (4)
N2—C71.380 (3)C12—C111.373 (4)
N3—C131.338 (4)C12—H120.9300
N3—C141.440 (4)C11—H110.9300
N3—H30.8600C4—C21.505 (5)
C9—C101.389 (4)C14—H14A0.9700
C9—C81.393 (4)C14—H14B0.9700
C9—H90.9300C2—H2A0.9600
C3—C41.506 (5)C2—H2B0.9600
C3—H3A0.9600C2—H2C0.9600
C3—H3B0.9600
C8—S1—C688.06 (13)N2—C7—C8115.6 (2)
C15—O4—C16117.2 (3)C12—C7—C8119.5 (2)
C5—O1—C4120.4 (2)C9—C10—C11119.4 (3)
C6—N1—C5123.7 (2)C9—C10—C13122.9 (3)
C6—N1—H1118.2C11—C10—C13117.7 (3)
C5—N1—H1118.2C9—C8—C7121.1 (3)
C6—N2—C7110.0 (2)C9—C8—S1129.2 (2)
C13—N3—C14120.0 (3)C7—C8—S1109.7 (2)
C13—N3—H3120.0C11—C12—C7119.0 (3)
C14—N3—H3120.0C11—C12—H12120.5
C10—C9—C8119.1 (3)C7—C12—H12120.5
C10—C9—H9120.5C12—C11—C10121.9 (3)
C8—C9—H9120.5C12—C11—H11119.1
C4—C3—H3A109.5C10—C11—H11119.1
C4—C3—H3B109.5O3—C13—N3120.8 (3)
H3A—C3—H3B109.5O3—C13—C10121.3 (3)
C4—C3—H3C109.5N3—C13—C10117.9 (3)
H3A—C3—H3C109.5O2—C5—O1126.9 (3)
H3B—C3—H3C109.5O2—C5—N1123.0 (3)
O5—C15—O4123.9 (4)O1—C5—N1110.1 (2)
O5—C15—C14122.7 (4)O1—C4—C2109.6 (3)
O4—C15—C14113.4 (3)O1—C4—C3109.4 (3)
O4—C16—H16A109.5C2—C4—C3113.1 (3)
O4—C16—H16B109.5O1—C4—C1102.8 (2)
H16A—C16—H16B109.5C2—C4—C1110.5 (3)
O4—C16—H16C109.5C3—C4—C1110.9 (3)
H16A—C16—H16C109.5N3—C14—C15115.3 (3)
H16B—C16—H16C109.5N3—C14—H14A108.4
C4—C1—H1A109.5C15—C14—H14A108.4
C4—C1—H1B109.5N3—C14—H14B108.4
H1A—C1—H1B109.5C15—C14—H14B108.4
C4—C1—H1C109.5H14A—C14—H14B107.5
H1A—C1—H1C109.5C4—C2—H2A109.5
H1B—C1—H1C109.5C4—C2—H2B109.5
N2—C6—N1121.6 (2)H2A—C2—H2B109.5
N2—C6—S1116.6 (2)C4—C2—H2C109.5
N1—C6—S1121.8 (2)H2A—C2—H2C109.5
N2—C7—C12124.9 (2)H2B—C2—H2C109.5
C16—O4—C15—O50.7 (7)C8—C7—C12—C111.5 (4)
C16—O4—C15—C14179.2 (4)C7—C12—C11—C100.1 (4)
C7—N2—C6—N1178.2 (2)C9—C10—C11—C12−1.6 (5)
C7—N2—C6—S1−1.2 (3)C13—C10—C11—C12178.3 (3)
C5—N1—C6—N2−171.5 (3)C14—N3—C13—O35.3 (5)
C5—N1—C6—S17.8 (4)C14—N3—C13—C10−174.5 (3)
C8—S1—C6—N20.2 (2)C9—C10—C13—O3161.8 (3)
C8—S1—C6—N1−179.1 (3)C11—C10—C13—O3−18.2 (5)
C6—N2—C7—C12−178.0 (3)C9—C10—C13—N3−18.4 (5)
C6—N2—C7—C81.8 (3)C11—C10—C13—N3161.7 (3)
C8—C9—C10—C111.4 (4)C4—O1—C5—O25.0 (5)
C8—C9—C10—C13−178.6 (3)C4—O1—C5—N1−174.9 (2)
C10—C9—C8—C70.3 (4)C6—N1—C5—O2−6.2 (5)
C10—C9—C8—S1−179.6 (2)C6—N1—C5—O1173.7 (3)
N2—C7—C8—C9178.4 (3)C5—O1—C4—C2−65.7 (4)
C12—C7—C8—C9−1.8 (4)C5—O1—C4—C358.8 (4)
N2—C7—C8—S1−1.7 (3)C5—O1—C4—C1176.7 (3)
C12—C7—C8—S1178.2 (2)C13—N3—C14—C1571.6 (4)
C6—S1—C8—C9−179.3 (3)O5—C15—C14—N3−168.8 (4)
C6—S1—C8—C70.8 (2)O4—C15—C14—N312.7 (5)
N2—C7—C12—C11−178.6 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.862.163.005 (3)167.
N3—H3···O3ii0.862.112.802 (3)137.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯N2i0.862.163.005 (3)167
N3—H3⋯O3ii0.862.112.802 (3)137

Symmetry codes: (i) ; (ii) .

  7 in total

1.  Antitumor benzothiazoles. 26.(1) 2-(3,4-dimethoxyphenyl)-5-fluorobenzothiazole (GW 610, NSC 721648), a simple fluorinated 2-arylbenzothiazole, shows potent and selective inhibitory activity against lung, colon, and breast cancer cell lines.

Authors:  Catriona G Mortimer; Geoffrey Wells; Jean-Philippe Crochard; Erica L Stone; Tracey D Bradshaw; Malcolm F G Stevens; Andrew D Westwell
Journal:  J Med Chem       Date:  2006-01-12       Impact factor: 7.446

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  1,3-Benzothiazole-6-carboxamidinium chloride dihydrate.

Authors:  Dubravka Matković-Calogović; Zora Popović; Vesna Tralić-Kulenović; Livio Racanè; Grace Karminski-Zamola
Journal:  Acta Crystallogr C       Date:  2003-03-11       Impact factor: 1.172

4.  Benzothiazolines as antituberculous agents.

Authors:  P J Palmer; R B Trigg; J V Warrington
Journal:  J Med Chem       Date:  1971-03       Impact factor: 7.446

5.  Ethyl 2-(tert-butoxy-carbonyl-amino)-1,3-benzothia-zole-6-carboxyl-ate.

Authors:  Can Lei; Xin Fang; Hai-Yang Yu; Ming-Dong Huang; Jun-Dong Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-24

6.  Fluorinated 2-(4-amino-3-methylphenyl)benzothiazoles induce CYP1A1 expression, become metabolized, and bind to macromolecules in sensitive human cancer cells.

Authors:  Eileen Brantley; Valentina Trapani; Michael C Alley; Curtis D Hose; Tracey D Bradshaw; Malcolm F G Stevens; Edward A Sausville; Sherman F Stinson
Journal:  Drug Metab Dispos       Date:  2004-09-08       Impact factor: 3.922

7.  Novel cyano- and amidinobenzothiazole derivatives: synthesis, antitumor evaluation, and X-ray and quantitative structure-activity relationship (QSAR) analysis.

Authors:  Irena Caleta; Marijeta Kralj; Marko Marjanović; Branimir Bertosa; Sanja Tomić; Gordana Pavlović; Kresimir Pavelić; Grace Karminski-Zamola
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  7 in total

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