Literature DB >> 22259379

{N'-[(2-Oxidonaphthalen-1-yl)methyl-idene]benzohydrazidato}(1,10-phenanthroline)copper(II) methanol monosolvate.

Bao-Lin Liu, De-Ming Dong, Xiu-Yi Hua, Jian-Wei Zhu.   

Abstract

The title mononuclear complex, [Cu(C(18)H(12)N(2)O(2))(C(12)H(8)N(2))]·CH(3)OH, contains one N'-[(2-oxidonaphthalen-1-yl)methyl-idene]benzohydrazidate ligand (L(2-)), a Cu(2+) cation, one 1,10-phenanthroline ligand and a methanol solvent mol-ecule. The Cu(II) ion adopts a CuO(2)N(3) distorted square-pyramidal coordination. An O-H⋯O hydrogen bond is formed between the methanol solvent mol-ecule and the hydrazide O atom of the L(2-) ligand.

Entities:  

Year:  2011        PMID: 22259379      PMCID: PMC3254345          DOI: 10.1107/S1600536811054316

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the preparation of the Schiff base, see: Qiao et al. (2010 ▶). For applications of Schiff base compounds, see: Anford et al. (1998 ▶); Guo et al. (2010 ▶). For related structures, see: Huo et al. (2004 ▶); Liu et al. (2008 ▶); Sreeja et al. (2004 ▶).

Experimental

Crystal data

[Cu(C18H12N2O2)(C12H8N2)]·CH4O M = 564.08 Monoclinic, a = 20.388 (2) Å b = 9.9707 (10) Å c = 12.5268 (12) Å β = 105.035 (2)° V = 2459.4 (4) Å3 Z = 4 Mo Kα radiation μ = 0.93 mm−1 T = 185 K 0.20 × 0.18 × 0.17 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.836, T max = 0.858 12077 measured reflections 4352 independent reflections 2950 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.093 S = 1.02 4352 reflections 354 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010) ▶. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811054316/kp2374sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811054316/kp2374Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C18H12N2O2)(C12H8N2)]·CH4OF(000) = 1164
Mr = 564.08Dx = 1.523 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3881 reflections
a = 20.388 (2) Åθ = 2.3–25.1°
b = 9.9707 (10) ŵ = 0.93 mm1
c = 12.5268 (12) ÅT = 185 K
β = 105.035 (2)°Block, brown
V = 2459.4 (4) Å30.20 × 0.18 × 0.17 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer4352 independent reflections
Radiation source: fine-focus sealed tube2950 reflections with I > 2σ(I)
graphiteRint = 0.059
phi and ω scansθmax = 25.1°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −21→24
Tmin = 0.836, Tmax = 0.858k = −11→10
12077 measured reflectionsl = −14→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0369P)2 + 0.1098P] where P = (Fo2 + 2Fc2)/3
4352 reflections(Δ/σ)max < 0.001
354 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.32 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.25702 (2)0.62657 (4)0.14434 (3)0.02321 (13)
N20.22403 (12)0.6138 (3)0.2738 (2)0.0210 (6)
N40.30304 (13)0.6479 (3)0.0204 (2)0.0243 (7)
O10.32626 (11)0.5026 (2)0.23282 (18)0.0248 (5)
O20.20269 (11)0.7819 (2)0.09414 (18)0.0272 (5)
N10.25609 (13)0.5187 (3)0.3516 (2)0.0225 (6)
C220.21141 (17)0.3799 (3)−0.1607 (3)0.0281 (8)
C100.08817 (15)0.8615 (3)0.2718 (3)0.0201 (7)
C300.28412 (16)0.5641 (3)−0.0679 (3)0.0219 (8)
C180.15699 (16)0.8359 (3)0.1370 (3)0.0230 (8)
C170.12057 (16)0.9477 (3)0.0781 (3)0.0283 (8)
H170.13320.98190.01550.034*
C190.15462 (17)0.3786 (4)0.0142 (3)0.0334 (9)
H190.13450.37690.07470.040*
C290.23126 (16)0.4680 (3)−0.0704 (3)0.0223 (8)
N30.20374 (13)0.4662 (3)0.0168 (2)0.0237 (7)
C280.35071 (17)0.7391 (3)0.0217 (3)0.0298 (8)
H280.36320.79840.08300.036*
C70.30846 (16)0.4681 (3)0.3224 (3)0.0218 (8)
C60.34865 (15)0.3646 (3)0.3957 (3)0.0224 (7)
C50.40428 (16)0.3049 (3)0.3705 (3)0.0283 (8)
H50.41790.33370.30730.034*
C80.17973 (15)0.6886 (3)0.3031 (3)0.0211 (7)
H80.17130.67200.37300.025*
C150.04909 (16)0.9624 (3)0.2047 (3)0.0253 (8)
C270.38318 (17)0.7519 (4)−0.0626 (3)0.0327 (9)
H270.41680.8190−0.05900.039*
C250.31509 (16)0.5700 (3)−0.1560 (3)0.0252 (8)
C90.14253 (16)0.7951 (3)0.2367 (3)0.0213 (7)
C240.29397 (18)0.4778 (4)−0.2454 (3)0.0337 (9)
H240.31520.4805−0.30460.040*
C160.06880 (17)1.0053 (3)0.1098 (3)0.0294 (8)
H160.04481.07700.06700.035*
C40.44030 (18)0.2036 (3)0.4365 (3)0.0346 (9)
H40.47860.16420.41870.042*
C230.24477 (18)0.3873 (4)−0.2479 (3)0.0343 (9)
H230.23190.3271−0.30860.041*
C120.01612 (16)0.8884 (3)0.3977 (3)0.0322 (9)
H120.00510.86350.46420.039*
C200.13060 (19)0.2883 (3)−0.0727 (3)0.0377 (10)
H200.09500.2275−0.07110.045*
C210.15930 (17)0.2894 (3)−0.1600 (3)0.0352 (9)
H210.14380.2289−0.21980.042*
C13−0.02362 (18)0.9835 (3)0.3284 (3)0.0353 (9)
H13−0.06191.02220.34660.042*
C110.07096 (16)0.8301 (3)0.3714 (3)0.0251 (8)
H110.09790.76750.42110.030*
C20.36495 (18)0.2189 (3)0.5537 (3)0.0336 (9)
H20.35100.18890.61640.040*
C10.32968 (17)0.3206 (3)0.4892 (3)0.0274 (8)
H10.29220.36120.50840.033*
C14−0.00667 (17)1.0199 (3)0.2342 (3)0.0331 (9)
H14−0.03321.08560.18730.040*
C260.36606 (17)0.6671 (3)−0.1501 (3)0.0300 (9)
H260.38850.6732−0.20760.036*
C30.42037 (19)0.1600 (3)0.5282 (3)0.0381 (10)
H30.44460.09030.57330.046*
O30.45503 (12)0.6073 (3)0.2347 (2)0.0496 (7)
H3A0.42000.56900.24300.074*
C310.51281 (18)0.5443 (4)0.3014 (4)0.0487 (11)
H31A0.55370.58770.29060.073*
H31B0.51280.44940.28100.073*
H31C0.51220.55180.37920.073*
U11U22U33U12U13U23
Cu10.0281 (2)0.0251 (2)0.0184 (2)0.0030 (2)0.00950 (17)0.0013 (2)
N20.0245 (14)0.0205 (15)0.0193 (15)0.0015 (13)0.0081 (12)0.0036 (13)
N40.0260 (15)0.0254 (16)0.0228 (17)0.0045 (13)0.0087 (13)0.0020 (13)
O10.0274 (12)0.0288 (13)0.0199 (14)0.0057 (10)0.0090 (11)0.0031 (10)
O20.0360 (13)0.0264 (13)0.0220 (14)0.0046 (11)0.0124 (11)0.0042 (10)
N10.0271 (16)0.0227 (15)0.0187 (16)0.0027 (12)0.0079 (13)0.0015 (13)
C220.0337 (19)0.0243 (19)0.024 (2)0.0075 (18)0.0038 (16)0.0030 (17)
C100.0194 (16)0.0169 (17)0.0224 (19)−0.0027 (14)0.0026 (14)−0.0041 (15)
C300.0228 (18)0.0262 (19)0.0174 (19)0.0095 (15)0.0065 (16)0.0066 (15)
C180.0289 (19)0.0201 (19)0.0185 (19)−0.0016 (14)0.0032 (16)−0.0031 (14)
C170.036 (2)0.026 (2)0.022 (2)−0.0012 (16)0.0056 (18)0.0032 (16)
C190.034 (2)0.031 (2)0.036 (2)0.0011 (19)0.0110 (18)0.0088 (19)
C290.0224 (18)0.0227 (19)0.022 (2)0.0086 (15)0.0055 (16)0.0038 (15)
N30.0268 (16)0.0256 (16)0.0210 (17)0.0045 (13)0.0104 (14)0.0041 (12)
C280.032 (2)0.033 (2)0.026 (2)0.0006 (17)0.0095 (17)0.0021 (17)
C70.0259 (19)0.0244 (19)0.0153 (19)−0.0037 (15)0.0059 (16)−0.0025 (14)
C60.0232 (17)0.0203 (17)0.0228 (19)−0.0037 (16)0.0041 (15)−0.0006 (16)
C50.0295 (19)0.0247 (19)0.031 (2)0.0005 (16)0.0073 (17)−0.0022 (16)
C80.0247 (18)0.0218 (18)0.0187 (19)−0.0035 (15)0.0089 (16)−0.0026 (15)
C150.0241 (19)0.0218 (19)0.030 (2)0.0010 (15)0.0062 (17)−0.0016 (16)
C270.029 (2)0.040 (2)0.032 (2)0.0010 (17)0.0136 (18)0.0117 (18)
C250.0258 (19)0.0297 (19)0.021 (2)0.0111 (16)0.0067 (17)0.0051 (16)
C90.0244 (18)0.0197 (18)0.0193 (19)−0.0012 (15)0.0050 (15)−0.0006 (15)
C240.042 (2)0.041 (2)0.022 (2)0.0164 (19)0.0154 (19)0.0033 (17)
C160.0294 (19)0.0234 (19)0.032 (2)0.0071 (16)0.0024 (18)0.0030 (16)
C40.032 (2)0.030 (2)0.037 (2)0.0038 (17)0.0012 (19)−0.0067 (18)
C230.047 (2)0.034 (2)0.021 (2)0.008 (2)0.0072 (18)−0.0025 (18)
C120.032 (2)0.033 (2)0.036 (2)−0.0023 (18)0.0159 (18)−0.0052 (18)
C200.040 (2)0.026 (2)0.045 (3)−0.0039 (18)0.007 (2)0.0040 (19)
C210.039 (2)0.028 (2)0.033 (2)0.0024 (18)0.0009 (19)−0.0030 (17)
C130.029 (2)0.032 (2)0.048 (3)0.0073 (18)0.016 (2)−0.0036 (19)
C110.0256 (18)0.0216 (19)0.029 (2)0.0011 (15)0.0090 (17)0.0004 (15)
C20.037 (2)0.033 (2)0.026 (2)−0.0103 (18)−0.0001 (18)0.0073 (17)
C10.0255 (19)0.032 (2)0.023 (2)−0.0059 (16)0.0034 (17)−0.0017 (16)
C140.028 (2)0.027 (2)0.041 (3)0.0077 (16)0.0046 (19)0.0043 (17)
C260.029 (2)0.040 (2)0.025 (2)0.0100 (17)0.0146 (18)0.0105 (17)
C30.041 (2)0.027 (2)0.037 (2)0.0005 (17)−0.008 (2)0.0085 (17)
O30.0353 (15)0.0576 (19)0.057 (2)−0.0004 (15)0.0143 (15)0.0074 (15)
C310.035 (2)0.056 (3)0.056 (3)−0.007 (2)0.014 (2)−0.009 (2)
Cu1—O21.913 (2)C8—C91.437 (4)
Cu1—N21.914 (2)C8—H80.9500
Cu1—O11.984 (2)C15—C141.405 (4)
Cu1—N42.023 (3)C15—C161.417 (5)
Cu1—N32.321 (3)C27—C261.357 (5)
N2—C81.296 (4)C27—H270.9500
N2—N11.396 (3)C25—C261.408 (4)
N4—C281.328 (4)C25—C241.427 (5)
N4—C301.360 (4)C24—C231.344 (4)
O1—C71.312 (4)C24—H240.9500
O2—C181.306 (3)C16—H160.9500
N1—C71.315 (4)C4—C31.384 (5)
C22—C211.395 (4)C4—H40.9500
C22—C291.406 (4)C23—H230.9500
C22—C231.431 (4)C12—C111.374 (4)
C10—C111.416 (4)C12—C131.395 (5)
C10—C151.416 (4)C12—H120.9500
C10—C91.454 (4)C20—C211.367 (5)
C30—C251.407 (4)C20—H200.9500
C30—C291.436 (4)C21—H210.9500
C18—C91.416 (4)C13—C141.362 (5)
C18—C171.433 (4)C13—H130.9500
C17—C161.349 (4)C11—H110.9500
C17—H170.9500C2—C11.378 (4)
C19—N31.323 (4)C2—C31.382 (5)
C19—C201.400 (5)C2—H20.9500
C19—H190.9500C1—H10.9500
C29—N31.352 (4)C14—H140.9500
C28—C271.390 (4)C26—H260.9500
C28—H280.9500C3—H30.9500
C7—C61.480 (4)O3—C311.403 (4)
C6—C51.387 (4)O3—H3A0.8400
C6—C11.396 (4)C31—H31A0.9800
C5—C41.388 (5)C31—H31B0.9800
C5—H50.9500C31—H31C0.9800
O2—Cu1—N291.80 (10)C10—C15—C16118.3 (3)
O2—Cu1—O1162.81 (9)C26—C27—C28118.9 (3)
N2—Cu1—O180.85 (10)C26—C27—H27120.6
O2—Cu1—N490.39 (10)C28—C27—H27120.6
N2—Cu1—N4172.79 (11)C30—C25—C26117.6 (3)
O1—Cu1—N495.16 (9)C30—C25—C24118.9 (3)
O2—Cu1—N3101.75 (9)C26—C25—C24123.5 (3)
N2—Cu1—N3109.43 (10)C18—C9—C8121.6 (3)
O1—Cu1—N395.36 (9)C18—C9—C10119.0 (3)
N4—Cu1—N376.80 (10)C8—C9—C10119.4 (3)
C8—N2—N1115.4 (3)C23—C24—C25121.5 (3)
C8—N2—Cu1128.7 (2)C23—C24—H24119.3
N1—N2—Cu1115.65 (18)C25—C24—H24119.3
C28—N4—C30118.9 (3)C17—C16—C15122.2 (3)
C28—N4—Cu1123.1 (2)C17—C16—H16118.9
C30—N4—Cu1118.0 (2)C15—C16—H16118.9
C7—O1—Cu1109.05 (19)C3—C4—C5119.9 (3)
C18—O2—Cu1127.8 (2)C3—C4—H4120.1
C7—N1—N2109.5 (2)C5—C4—H4120.1
C21—C22—C29117.3 (3)C24—C23—C22121.1 (3)
C21—C22—C23123.5 (3)C24—C23—H23119.4
C29—C22—C23119.2 (3)C22—C23—H23119.4
C11—C10—C15116.7 (3)C11—C12—C13121.0 (3)
C11—C10—C9123.3 (3)C11—C12—H12119.5
C15—C10—C9120.0 (3)C13—C12—H12119.5
N4—C30—C25121.4 (3)C21—C20—C19118.8 (3)
N4—C30—C29118.7 (3)C21—C20—H20120.6
C25—C30—C29119.9 (3)C19—C20—H20120.6
O2—C18—C9125.3 (3)C20—C21—C22119.7 (3)
O2—C18—C17116.0 (3)C20—C21—H21120.2
C9—C18—C17118.6 (3)C22—C21—H21120.2
C16—C17—C18121.4 (3)C14—C13—C12118.9 (3)
C16—C17—H17119.3C14—C13—H13120.5
C18—C17—H17119.3C12—C13—H13120.5
N3—C19—C20123.6 (3)C12—C11—C10121.4 (3)
N3—C19—H19118.2C12—C11—H11119.3
C20—C19—H19118.2C10—C11—H11119.3
N3—C29—C22123.3 (3)C1—C2—C3120.7 (3)
N3—C29—C30117.2 (3)C1—C2—H2119.7
C22—C29—C30119.5 (3)C3—C2—H2119.7
C19—N3—C29117.3 (3)C2—C1—C6120.5 (3)
C19—N3—Cu1133.5 (2)C2—C1—H1119.8
C29—N3—Cu1109.2 (2)C6—C1—H1119.8
N4—C28—C27123.0 (3)C13—C14—C15121.6 (3)
N4—C28—H28118.5C13—C14—H14119.2
C27—C28—H28118.5C15—C14—H14119.2
O1—C7—N1124.2 (3)C27—C26—C25120.2 (3)
O1—C7—C6118.8 (3)C27—C26—H26119.9
N1—C7—C6117.0 (3)C25—C26—H26119.9
C5—C6—C1118.5 (3)C2—C3—C4119.5 (3)
C5—C6—C7120.8 (3)C2—C3—H3120.2
C1—C6—C7120.7 (3)C4—C3—H3120.2
C6—C5—C4121.0 (3)C31—O3—H3A109.5
C6—C5—H5119.5O3—C31—H31A109.5
C4—C5—H5119.5O3—C31—H31B109.5
N2—C8—C9124.3 (3)H31A—C31—H31B109.5
N2—C8—H8117.9O3—C31—H31C109.5
C9—C8—H8117.9H31A—C31—H31C109.5
C14—C15—C10120.2 (3)H31B—C31—H31C109.5
C14—C15—C16121.5 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O10.841.992.820 (3)167.
Table 1

Selected bond lengths (Å)

Cu1—O21.913 (2)
Cu1—N21.914 (2)
Cu1—O11.984 (2)
Cu1—N42.023 (3)
Cu1—N32.321 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O10.841.992.820 (3)167
  4 in total

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Authors:  Yun-Nan Guo; Gong-Feng Xu; Patrick Gamez; Lang Zhao; Shuang-Yan Lin; Ruiping Deng; Jinkui Tang; Hong-Jie Zhang
Journal:  J Am Chem Soc       Date:  2010-06-30       Impact factor: 15.419

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  John D. Ranford; Jagadese J. Vittal; Yu M. Wang
Journal:  Inorg Chem       Date:  1998-03-23       Impact factor: 5.165

4.  (E)-N'-[(2-Hydroxy-1-naphthyl)methyl-ene]benzohydrazide monohydrate.

Authors:  Yan Qiao; Xiuping Ju; Zhiqing Gao; Lingqian Kong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-09
  4 in total

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