| Literature DB >> 22259378 |
Abstract
In the crystal structure of the polymeric title complex, [Cd(C(11)H(10)O(4))(C(10)H(8)N(2))](n), the Cd(II) cation is chelated by one 2,2-bipyridine ligand and two carboxyl groups from two trimethyl-isophthalate (TMIPA) anions, and is further coordinated by one carboxyl-ate O atom from a third TMIPA anion, forming a distorted penta-gonal-bipyramidal geometry. Each TMIPA anion bridges three Cd(II) cations, forming polymeric complex sheets parallel to (001). Weak C-H⋯O hydrogen bonding occurs between adjacent sheets.Entities:
Year: 2011 PMID: 22259378 PMCID: PMC3254344 DOI: 10.1107/S1600536811054183
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C11H10O4)(C10H8N2)] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 5089 reflections |
| θ = 2.2–27.8° | |
| µ = 1.20 mm−1 | |
| Block, colorless | |
| 0.15 × 0.10 × 0.10 mm |
| Bruker SMART APEXII CCD diffractometer | 4299 independent reflections |
| Radiation source: fine-focus sealed tube | 2454 reflections with |
| graphite | |
| ω and φ scans | θmax = 27.6°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 14349 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4299 reflections | (Δ/σ)max = 0.001 |
| 253 parameters | Δρmax = 0.51 e Å−3 |
| 0 restraints | Δρmin = −0.63 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cd1 | 0.50573 (2) | 0.584163 (18) | 0.575068 (16) | 0.03177 (11) | |
| C1 | 0.3060 (4) | 0.7000 (3) | 0.6257 (3) | 0.0496 (14) | |
| H1A | 0.3218 | 0.7291 | 0.5826 | 0.060* | |
| C2 | 0.2259 (4) | 0.7293 (3) | 0.6667 (3) | 0.0569 (15) | |
| H2A | 0.1873 | 0.7758 | 0.6512 | 0.068* | |
| C3 | 0.2046 (4) | 0.6877 (3) | 0.7314 (3) | 0.0634 (16) | |
| H3A | 0.1518 | 0.7064 | 0.7613 | 0.076* | |
| C4 | 0.2620 (4) | 0.6187 (3) | 0.7511 (3) | 0.0586 (15) | |
| H4A | 0.2489 | 0.5903 | 0.7951 | 0.070* | |
| C5 | 0.3391 (3) | 0.5909 (3) | 0.7063 (2) | 0.0385 (11) | |
| C6 | 0.4024 (4) | 0.5140 (3) | 0.7238 (2) | 0.0396 (11) | |
| C7 | 0.3857 (4) | 0.4630 (3) | 0.7852 (3) | 0.0471 (13) | |
| H7A | 0.3346 | 0.4768 | 0.8183 | 0.057* | |
| C8 | 0.4453 (4) | 0.3916 (3) | 0.7965 (3) | 0.0541 (15) | |
| H8A | 0.4352 | 0.3573 | 0.8377 | 0.065* | |
| C9 | 0.5189 (4) | 0.3718 (3) | 0.7472 (3) | 0.0622 (16) | |
| H9A | 0.5590 | 0.3232 | 0.7533 | 0.075* | |
| C10 | 0.5323 (5) | 0.4249 (4) | 0.6888 (3) | 0.082 (2) | |
| H10A | 0.5835 | 0.4116 | 0.6555 | 0.098* | |
| C11 | 0.6847 (3) | 0.4899 (3) | 0.5399 (2) | 0.0311 (10) | |
| C12 | 0.7761 (3) | 0.4466 (3) | 0.5081 (2) | 0.0335 (11) | |
| C13 | 0.8065 (3) | 0.3639 (3) | 0.5314 (2) | 0.0344 (11) | |
| C14 | 0.8932 (3) | 0.3269 (3) | 0.5012 (3) | 0.0387 (12) | |
| C15 | 0.9490 (4) | 0.3712 (3) | 0.4471 (3) | 0.0581 (16) | |
| C16 | 0.9164 (4) | 0.4521 (3) | 0.4247 (3) | 0.0699 (18) | |
| H16A | 0.9529 | 0.4813 | 0.3888 | 0.084* | |
| C17 | 0.8299 (4) | 0.4907 (3) | 0.4549 (3) | 0.0543 (15) | |
| C18 | 0.7974 (5) | 0.5776 (3) | 0.4262 (3) | 0.078 (2) | |
| H18A | 0.7381 | 0.5964 | 0.4522 | 0.117* | |
| H18B | 0.7823 | 0.5733 | 0.3747 | 0.117* | |
| H18C | 0.8511 | 0.6183 | 0.4334 | 0.117* | |
| C19 | 0.7417 (4) | 0.3160 (3) | 0.5853 (3) | 0.0456 (13) | |
| H19A | 0.7717 | 0.2611 | 0.5955 | 0.068* | |
| H19B | 0.6753 | 0.3078 | 0.5648 | 0.068* | |
| H19C | 0.7365 | 0.3483 | 0.6301 | 0.068* | |
| C20 | 0.9284 (3) | 0.2395 (3) | 0.5264 (3) | 0.0417 (12) | |
| C21 | 1.0421 (5) | 0.3344 (4) | 0.4112 (4) | 0.097 (3) | |
| H21A | 1.0683 | 0.3748 | 0.3761 | 0.146* | |
| H21B | 1.0249 | 0.2819 | 0.3866 | 0.146* | |
| H21C | 1.0926 | 0.3232 | 0.4479 | 0.146* | |
| N1 | 0.3624 (3) | 0.6324 (2) | 0.64418 (19) | 0.0367 (9) | |
| N2 | 0.4764 (3) | 0.4950 (3) | 0.6760 (2) | 0.0532 (12) | |
| O1 | 0.6951 (3) | 0.5405 (2) | 0.59115 (17) | 0.0536 (9) | |
| O2 | 0.5988 (2) | 0.47532 (18) | 0.51372 (16) | 0.0412 (8) | |
| O3 | 0.9433 (3) | 0.2269 (2) | 0.5937 (2) | 0.0580 (10) | |
| O4 | 0.9409 (3) | 0.18136 (19) | 0.48063 (19) | 0.0618 (11) |
| Cd1 | 0.0381 (2) | 0.02748 (17) | 0.02972 (17) | −0.00141 (17) | 0.00347 (18) | −0.00099 (13) |
| C1 | 0.059 (4) | 0.047 (3) | 0.043 (3) | 0.003 (3) | 0.007 (3) | 0.009 (2) |
| C2 | 0.056 (4) | 0.048 (3) | 0.067 (4) | 0.008 (3) | 0.011 (3) | 0.005 (3) |
| C3 | 0.061 (4) | 0.063 (4) | 0.066 (4) | 0.016 (3) | 0.021 (3) | 0.002 (3) |
| C4 | 0.063 (4) | 0.059 (3) | 0.054 (3) | 0.017 (3) | 0.019 (3) | 0.017 (3) |
| C5 | 0.040 (3) | 0.041 (3) | 0.035 (3) | −0.001 (3) | 0.006 (2) | −0.001 (2) |
| C6 | 0.044 (3) | 0.038 (3) | 0.038 (3) | −0.001 (2) | 0.002 (2) | 0.002 (2) |
| C7 | 0.051 (3) | 0.047 (3) | 0.044 (3) | 0.004 (3) | 0.015 (3) | 0.011 (2) |
| C8 | 0.060 (4) | 0.047 (3) | 0.054 (4) | −0.011 (3) | 0.002 (3) | 0.021 (3) |
| C9 | 0.068 (4) | 0.048 (3) | 0.070 (4) | 0.019 (3) | 0.009 (3) | 0.022 (3) |
| C10 | 0.098 (5) | 0.065 (4) | 0.082 (5) | 0.040 (4) | 0.044 (4) | 0.033 (3) |
| C11 | 0.029 (3) | 0.026 (2) | 0.038 (3) | 0.004 (2) | 0.002 (2) | 0.007 (2) |
| C12 | 0.033 (3) | 0.027 (2) | 0.040 (3) | 0.000 (2) | −0.003 (2) | 0.005 (2) |
| C13 | 0.025 (3) | 0.031 (2) | 0.047 (3) | −0.004 (2) | −0.006 (2) | 0.001 (2) |
| C14 | 0.026 (3) | 0.030 (2) | 0.061 (3) | 0.003 (2) | 0.003 (2) | 0.001 (2) |
| C15 | 0.041 (3) | 0.044 (3) | 0.089 (4) | 0.010 (3) | 0.021 (3) | 0.010 (3) |
| C16 | 0.055 (4) | 0.048 (3) | 0.106 (5) | 0.014 (3) | 0.040 (4) | 0.034 (3) |
| C17 | 0.045 (3) | 0.039 (3) | 0.079 (4) | 0.014 (3) | 0.015 (3) | 0.009 (3) |
| C18 | 0.084 (5) | 0.049 (3) | 0.102 (5) | 0.020 (3) | 0.036 (4) | 0.029 (3) |
| C19 | 0.035 (3) | 0.038 (3) | 0.064 (3) | 0.000 (2) | 0.000 (3) | 0.008 (2) |
| C20 | 0.034 (3) | 0.027 (3) | 0.064 (4) | 0.002 (2) | −0.002 (3) | 0.004 (3) |
| C21 | 0.069 (4) | 0.071 (4) | 0.152 (7) | 0.034 (4) | 0.063 (5) | 0.032 (4) |
| N1 | 0.044 (3) | 0.030 (2) | 0.036 (2) | −0.002 (2) | 0.0083 (19) | 0.0022 (17) |
| N2 | 0.065 (3) | 0.046 (2) | 0.048 (3) | 0.019 (2) | 0.022 (2) | 0.016 (2) |
| O1 | 0.049 (2) | 0.061 (2) | 0.051 (2) | 0.0074 (19) | −0.0078 (18) | −0.0182 (18) |
| O2 | 0.0239 (18) | 0.0478 (19) | 0.052 (2) | 0.0033 (16) | −0.0045 (16) | −0.0085 (15) |
| O3 | 0.072 (3) | 0.038 (2) | 0.064 (3) | 0.0192 (19) | −0.023 (2) | −0.0055 (17) |
| O4 | 0.092 (3) | 0.0328 (19) | 0.061 (2) | 0.017 (2) | 0.010 (2) | −0.0006 (17) |
| Cd1—N1 | 2.393 (4) | C11—O2 | 1.250 (5) |
| Cd1—N2 | 2.334 (4) | C11—C12 | 1.499 (6) |
| Cd1—O1 | 2.607 (3) | C12—C17 | 1.382 (6) |
| Cd1—O2i | 2.317 (3) | C12—C13 | 1.414 (5) |
| Cd1—O2 | 2.372 (3) | C13—C14 | 1.394 (6) |
| Cd1—O3ii | 2.347 (3) | C13—C19 | 1.500 (6) |
| Cd1—O4ii | 2.396 (3) | C14—C15 | 1.409 (6) |
| C1—N1 | 1.333 (5) | C14—C20 | 1.510 (6) |
| C1—C2 | 1.371 (6) | C15—C16 | 1.392 (7) |
| C1—H1A | 0.9300 | C15—C21 | 1.505 (7) |
| C2—C3 | 1.372 (6) | C16—C17 | 1.402 (7) |
| C2—H2A | 0.9300 | C16—H16A | 0.9300 |
| C3—C4 | 1.363 (7) | C17—C18 | 1.514 (6) |
| C3—H3A | 0.9300 | C18—H18A | 0.9600 |
| C4—C5 | 1.374 (6) | C18—H18B | 0.9600 |
| C4—H4A | 0.9300 | C18—H18C | 0.9600 |
| C5—N1 | 1.338 (5) | C19—H19A | 0.9600 |
| C5—C6 | 1.494 (6) | C19—H19B | 0.9600 |
| C6—N2 | 1.341 (5) | C19—H19C | 0.9600 |
| C6—C7 | 1.388 (6) | C20—O4 | 1.241 (5) |
| C7—C8 | 1.377 (6) | C20—O3 | 1.255 (5) |
| C7—H7A | 0.9300 | C20—Cd1iii | 2.718 (4) |
| C8—C9 | 1.357 (7) | C21—H21A | 0.9600 |
| C8—H8A | 0.9300 | C21—H21B | 0.9600 |
| C9—C10 | 1.359 (7) | C21—H21C | 0.9600 |
| C9—H9A | 0.9300 | O2—Cd1i | 2.317 (3) |
| C10—N2 | 1.339 (6) | O3—Cd1iii | 2.347 (3) |
| C10—H10A | 0.9300 | O4—Cd1iii | 2.396 (3) |
| C11—O1 | 1.228 (5) | ||
| O2i—Cd1—N2 | 102.23 (14) | O1—C11—O2 | 120.5 (4) |
| O2i—Cd1—O3ii | 130.54 (12) | O1—C11—C12 | 119.5 (4) |
| N2—Cd1—O3ii | 119.81 (14) | O2—C11—C12 | 120.0 (4) |
| O2i—Cd1—O2 | 72.22 (12) | C17—C12—C13 | 121.1 (4) |
| N2—Cd1—O2 | 91.79 (12) | C17—C12—C11 | 117.4 (4) |
| O3ii—Cd1—O2 | 126.60 (12) | C13—C12—C11 | 121.5 (4) |
| O2i—Cd1—N1 | 91.21 (11) | C14—C13—C12 | 119.4 (4) |
| N2—Cd1—N1 | 69.02 (13) | C14—C13—C19 | 121.4 (4) |
| O3ii—Cd1—N1 | 81.58 (12) | C12—C13—C19 | 119.1 (4) |
| O2—Cd1—N1 | 151.76 (11) | C13—C14—C15 | 120.2 (4) |
| O2i—Cd1—O4ii | 85.85 (11) | C13—C14—C20 | 120.3 (4) |
| N2—Cd1—O4ii | 171.39 (14) | C15—C14—C20 | 119.5 (4) |
| O3ii—Cd1—O4ii | 54.62 (11) | C16—C15—C14 | 119.0 (5) |
| O2—Cd1—O4ii | 87.81 (12) | C16—C15—C21 | 118.0 (5) |
| N1—Cd1—O4ii | 114.27 (12) | C14—C15—C21 | 123.0 (5) |
| O2i—Cd1—O1 | 123.00 (10) | C15—C16—C17 | 121.6 (5) |
| N2—Cd1—O1 | 85.17 (13) | C15—C16—H16A | 119.2 |
| O3ii—Cd1—O1 | 87.47 (12) | C17—C16—H16A | 119.2 |
| O2—Cd1—O1 | 50.95 (10) | C12—C17—C16 | 118.7 (4) |
| N1—Cd1—O1 | 141.36 (11) | C12—C17—C18 | 122.7 (4) |
| O4ii—Cd1—O1 | 87.91 (12) | C16—C17—C18 | 118.6 (5) |
| O2i—Cd1—C20ii | 108.60 (14) | C17—C18—H18A | 109.5 |
| N2—Cd1—C20ii | 146.97 (16) | C17—C18—H18B | 109.5 |
| O3ii—Cd1—C20ii | 27.47 (12) | H18A—C18—H18B | 109.5 |
| O2—Cd1—C20ii | 108.48 (13) | C17—C18—H18C | 109.5 |
| N1—Cd1—C20ii | 98.32 (13) | H18A—C18—H18C | 109.5 |
| O4ii—Cd1—C20ii | 27.16 (12) | H18B—C18—H18C | 109.5 |
| O1—Cd1—C20ii | 87.82 (12) | C13—C19—H19A | 109.5 |
| N1—C1—C2 | 123.8 (4) | C13—C19—H19B | 109.5 |
| N1—C1—H1A | 118.1 | H19A—C19—H19B | 109.5 |
| C2—C1—H1A | 118.1 | C13—C19—H19C | 109.5 |
| C1—C2—C3 | 117.9 (5) | H19A—C19—H19C | 109.5 |
| C1—C2—H2A | 121.1 | H19B—C19—H19C | 109.5 |
| C3—C2—H2A | 121.1 | O4—C20—O3 | 121.3 (4) |
| C4—C3—C2 | 118.9 (5) | O4—C20—C14 | 119.6 (5) |
| C4—C3—H3A | 120.5 | O3—C20—C14 | 119.0 (4) |
| C2—C3—H3A | 120.5 | O4—C20—Cd1iii | 61.8 (2) |
| C3—C4—C5 | 120.3 (5) | O3—C20—Cd1iii | 59.6 (2) |
| C3—C4—H4A | 119.9 | C14—C20—Cd1iii | 178.4 (4) |
| C5—C4—H4A | 119.9 | C15—C21—H21A | 109.5 |
| N1—C5—C4 | 121.2 (4) | C15—C21—H21B | 109.5 |
| N1—C5—C6 | 116.1 (4) | H21A—C21—H21B | 109.5 |
| C4—C5—C6 | 122.7 (4) | C15—C21—H21C | 109.5 |
| N2—C6—C7 | 120.8 (4) | H21A—C21—H21C | 109.5 |
| N2—C6—C5 | 116.4 (4) | H21B—C21—H21C | 109.5 |
| C7—C6—C5 | 122.8 (4) | C1—N1—C5 | 117.8 (4) |
| C8—C7—C6 | 119.4 (5) | C1—N1—Cd1 | 123.9 (3) |
| C8—C7—H7A | 120.3 | C5—N1—Cd1 | 118.3 (3) |
| C6—C7—H7A | 120.3 | C10—N2—C6 | 117.9 (4) |
| C9—C8—C7 | 119.6 (5) | C10—N2—Cd1 | 122.0 (3) |
| C9—C8—H8A | 120.2 | C6—N2—Cd1 | 120.0 (3) |
| C7—C8—H8A | 120.2 | C11—O1—Cd1 | 88.5 (3) |
| C10—C9—C8 | 118.1 (5) | C11—O2—Cd1i | 151.4 (3) |
| C10—C9—H9A | 120.9 | C11—O2—Cd1 | 99.2 (3) |
| C8—C9—H9A | 120.9 | Cd1i—O2—Cd1 | 107.78 (12) |
| N2—C10—C9 | 124.1 (5) | C20—O3—Cd1iii | 93.0 (3) |
| N2—C10—H10A | 118.0 | C20—O4—Cd1iii | 91.1 (3) |
| C9—C10—H10A | 118.0 |
| H··· | ||||
| C4—H4A···O1iv | 0.93 | 2.32 | 3.240 (6) | 169 |
| C8—H8A···O3iv | 0.93 | 2.39 | 3.251 (6) | 155 |
Selected bond lengths (Å)
| Cd1—N1 | 2.393 (4) |
| Cd1—N2 | 2.334 (4) |
| Cd1—O1 | 2.607 (3) |
| Cd1—O2i | 2.317 (3) |
| Cd1—O2 | 2.372 (3) |
| Cd1—O3ii | 2.347 (3) |
| Cd1—O4ii | 2.396 (3) |
Symmetry codes: (i) ; (ii) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C4—H4 | 0.93 | 2.32 | 3.240 (6) | 169 |
| C8—H8 | 0.93 | 2.39 | 3.251 (6) | 155 |
Symmetry code: (iii) .