Literature DB >> 22259355

Bis(tetra-n-butyl-ammonium) bis-(5,6-dicyano-pyrazine-2,3-dithiol-ato-κS,S')palladium(II).

Masaaki Tomura, Yoshiro Yamashita.   

Abstract

In the title complex, (C(16)H(36)N)(2)[Pd(C(6)N(4)S(2))(2)], the centrosymmetric dianion is planar, with an r.m.s. deviation of 0.034 (8) Å. The Pd(II) atom, lying on an inversion center, has a square-planar coordination geometry, with Pd-S bond lengths of 2.276 (3) and 2.294 (3) Å.

Entities:  

Year:  2011        PMID: 22259355      PMCID: PMC3254323          DOI: 10.1107/S1600536811053402

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title complex, see: Tomura et al. (1994 ▶). For mol­ecular conductors and superconductors based on metal dithiol­ene complexes, see: Brossard et al. (1986 ▶); Cassoux et al. (1991 ▶); Kobayashi et al. (1987 ▶); Tajima et al. (1993 ▶); Tanaka et al. (2001 ▶). For related structures, including the 2,3-dicyano-5,6-dimercaptopyrazine system, see: Belo et al. (1999 ▶, 2004 ▶); Nomura et al. (2009 ▶); Rabaça & Almeida (2010 ▶). For related structures, including the 1,2-dicyano-4,5-dimercaptobenzene system, see: Alves et al. (2004 ▶). For inter­molecular inter­actions caused by heteroatoms, see: Yamashita & Tomura (1998 ▶).

Experimental

Crystal data

(C16H36N)2[Pd(C6N4S2)2] M = 975.80 Triclinic, a = 9.912 (3) Å b = 10.635 (4) Å c = 13.286 (4) Å α = 68.82 (2)° β = 87.74 (3)° γ = 80.16 (3)° V = 1286.3 (8) Å3 Z = 1 Mo Kα radiation μ = 0.56 mm−1 T = 296 K 0.25 × 0.10 × 0.05 mm

Data collection

Rigaku AFC-7R diffractometer 5102 measured reflections 4835 independent reflections 1751 reflections with I > 2σ(I) R int = 0.087 3 standard reflections every 150 reflections intensity decay: 1.0%

Refinement

R[F 2 > 2σ(F 2)] = 0.093 wR(F 2) = 0.222 S = 0.98 4835 reflections 272 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.41 e Å−3 Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988 ▶); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN (Molecular Structure Corporation & Rigaku, 2000 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811053402/hy2494sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811053402/hy2494Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C16H36N)2[Pd(C6N4S2)2]Z = 1
Mr = 975.80F(000) = 516
Triclinic, P1Dx = 1.260 Mg m3
Hall symbol: -P 1Melting point: 520.5 K
a = 9.912 (3) ÅMo Kα radiation, λ = 0.7107 Å
b = 10.635 (4) ÅCell parameters from 24 reflections
c = 13.286 (4) Åθ = 20.1–22.7°
α = 68.82 (2)°µ = 0.56 mm1
β = 87.74 (3)°T = 296 K
γ = 80.16 (3)°Needle, orange
V = 1286.3 (8) Å30.25 × 0.10 × 0.05 mm
Rigaku AFC-7R diffractometerRint = 0.087
Radiation source: rotating anodeθmax = 27.5°, θmin = 1.6°
graphite monochromatorh = −12→11
ω–2θ scansk = −12→0
5102 measured reflectionsl = −15→14
4835 independent reflections3 standard reflections every 150 reflections
1751 reflections with I > 2σ(I) intensity decay: 1.0%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.093Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.222H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0782P)2] where P = (Fo2 + 2Fc2)/3
4835 reflections(Δ/σ)max < 0.001
272 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.41 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pd11.00000.50001.00000.0590 (5)
S11.0651 (3)0.7047 (3)0.9048 (2)0.0750 (9)
S20.7779 (3)0.5945 (3)0.9425 (2)0.0677 (9)
N10.9253 (10)0.9342 (10)0.7768 (7)0.063 (2)
N20.6744 (9)0.8402 (11)0.8066 (8)0.073 (3)
N30.8122 (11)1.2596 (11)0.5958 (9)0.095 (3)
N40.4777 (11)1.1342 (12)0.6318 (11)0.127 (5)
N50.4587 (7)0.5033 (8)0.7369 (6)0.052 (2)
C10.9162 (9)0.8100 (12)0.8408 (7)0.045 (3)
C20.7894 (11)0.7582 (11)0.8586 (8)0.060 (3)
C30.8115 (12)1.0150 (12)0.7253 (9)0.064 (3)
C40.6864 (11)0.9648 (13)0.7422 (10)0.071 (3)
C50.8184 (11)1.1533 (14)0.6519 (10)0.069 (3)
C60.5674 (13)1.0600 (13)0.6803 (10)0.083 (4)
C70.5687 (9)0.5275 (10)0.6517 (7)0.063 (3)
H7A0.60800.44050.64580.075*
H7B0.52560.58590.58250.075*
C80.6833 (10)0.5921 (11)0.6738 (8)0.073 (3)
H8A0.72600.53510.74350.087*
H8B0.64520.68070.67740.087*
C90.7918 (11)0.6105 (11)0.5879 (8)0.075 (3)
H9A0.75030.67040.51850.090*
H9B0.82840.52260.58260.090*
C100.9092 (11)0.6720 (12)0.6152 (9)0.095 (4)
H10A0.87250.75760.62290.142*
H10B0.97390.68680.55810.142*
H10C0.95410.61000.68150.142*
C110.3911 (9)0.6377 (9)0.7481 (7)0.054 (3)
H11A0.32120.61810.80210.065*
H11B0.45970.67340.77510.065*
C120.3266 (12)0.7474 (11)0.6475 (9)0.084 (3)
H12A0.25210.71670.62250.100*
H12B0.39380.76600.59120.100*
C130.2724 (13)0.8766 (12)0.6698 (10)0.100 (4)
H13A0.20810.85580.72810.120*
H13B0.34800.90690.69360.120*
C140.2024 (14)0.9909 (12)0.5733 (11)0.129 (5)
H14A0.26861.02150.51910.193*
H14B0.16041.06550.59460.193*
H14C0.13350.95890.54470.193*
C150.3575 (9)0.4356 (10)0.7003 (7)0.063 (3)
H15A0.40770.35560.68860.076*
H15B0.31730.49850.63140.076*
C160.2417 (10)0.3915 (11)0.7775 (8)0.071 (3)
H16A0.18650.47120.78630.085*
H16B0.28010.33070.84770.085*
C170.1509 (10)0.3179 (11)0.7340 (8)0.075 (3)
H17A0.10970.38000.66520.090*
H17B0.20700.24050.72230.090*
C180.0388 (11)0.2682 (13)0.8123 (10)0.109 (5)
H18A0.07930.21120.88180.163*
H18B−0.01170.21670.78590.163*
H18C−0.02180.34550.81880.163*
C190.5197 (10)0.4106 (11)0.8485 (8)0.063 (3)
H19A0.58450.45670.86870.076*
H19B0.44640.40190.89980.076*
C200.5915 (11)0.2686 (11)0.8611 (8)0.075 (3)
H20A0.67220.27350.81710.090*
H20B0.53090.22090.83820.090*
C210.6318 (13)0.1934 (12)0.9792 (9)0.099 (4)
H21A0.68890.24471.00140.119*
H21B0.54980.18931.02170.119*
C220.7070 (16)0.0519 (14)1.0024 (11)0.144 (6)
H22A0.6491−0.00120.98460.216*
H22B0.73240.01071.07770.216*
H22C0.78780.05490.96000.216*
U11U22U33U12U13U23
Pd10.0540 (9)0.0755 (11)0.0521 (8)−0.0223 (7)0.0036 (6)−0.0235 (7)
S10.0555 (19)0.082 (2)0.081 (2)−0.0214 (17)0.0010 (16)−0.0172 (18)
S20.0515 (18)0.084 (2)0.0647 (19)−0.0243 (16)0.0047 (14)−0.0173 (17)
N10.073 (7)0.072 (7)0.059 (6)−0.019 (6)0.009 (5)−0.037 (6)
N20.055 (6)0.071 (7)0.098 (7)−0.017 (6)0.014 (5)−0.035 (6)
N30.108 (9)0.065 (8)0.111 (9)−0.014 (7)−0.009 (7)−0.031 (7)
N40.071 (8)0.124 (11)0.190 (13)0.012 (7)−0.055 (8)−0.069 (9)
N50.048 (5)0.061 (6)0.051 (5)−0.009 (4)0.002 (4)−0.027 (5)
C10.041 (6)0.078 (8)0.038 (6)−0.028 (6)0.015 (5)−0.040 (6)
C20.050 (7)0.072 (8)0.071 (7)−0.008 (6)0.009 (6)−0.042 (7)
C30.069 (8)0.059 (9)0.074 (8)−0.011 (7)0.024 (7)−0.036 (7)
C40.043 (7)0.063 (9)0.102 (10)0.003 (7)−0.007 (6)−0.029 (8)
C50.062 (8)0.068 (10)0.081 (9)−0.022 (7)0.006 (6)−0.028 (8)
C60.070 (9)0.083 (10)0.103 (10)−0.022 (8)−0.006 (8)−0.038 (8)
C70.055 (7)0.068 (8)0.055 (6)−0.003 (6)0.002 (5)−0.014 (6)
C80.057 (7)0.084 (9)0.071 (7)−0.017 (6)0.008 (6)−0.019 (6)
C90.081 (8)0.062 (8)0.075 (8)−0.007 (7)0.017 (6)−0.019 (6)
C100.071 (8)0.102 (10)0.097 (9)−0.031 (8)0.013 (7)−0.014 (8)
C110.054 (6)0.048 (7)0.056 (6)0.010 (5)0.007 (5)−0.023 (6)
C120.078 (8)0.065 (8)0.101 (10)0.003 (7)−0.004 (7)−0.029 (8)
C130.101 (10)0.072 (10)0.119 (11)−0.018 (8)0.029 (9)−0.026 (9)
C140.143 (13)0.075 (10)0.134 (12)0.028 (9)−0.015 (10)−0.016 (10)
C150.063 (7)0.062 (7)0.064 (7)−0.015 (6)−0.012 (6)−0.019 (6)
C160.059 (7)0.089 (9)0.068 (7)−0.011 (7)0.006 (6)−0.035 (7)
C170.064 (7)0.087 (9)0.082 (8)−0.014 (7)−0.010 (6)−0.039 (7)
C180.088 (9)0.138 (12)0.129 (11)−0.062 (9)0.021 (8)−0.066 (10)
C190.056 (7)0.076 (9)0.072 (8)−0.026 (6)0.007 (6)−0.038 (7)
C200.079 (8)0.080 (9)0.072 (8)−0.013 (7)−0.005 (6)−0.033 (7)
C210.102 (10)0.084 (10)0.094 (10)0.000 (8)−0.038 (8)−0.014 (8)
C220.174 (16)0.094 (12)0.128 (12)0.010 (11)−0.030 (11)−0.008 (10)
Pd1—S1i2.276 (3)C11—H11B0.9700
Pd1—S12.276 (3)C12—C131.514 (14)
Pd1—S22.294 (3)C12—H12A0.9700
Pd1—S2i2.294 (3)C12—H12B0.9700
S1—C11.732 (10)C13—C141.503 (15)
S2—C21.716 (11)C13—H13A0.9700
N1—C11.304 (11)C13—H13B0.9700
N1—C31.336 (12)C14—H14A0.9600
N2—C41.315 (12)C14—H14B0.9600
N2—C21.351 (12)C14—H14C0.9600
N3—C51.100 (12)C15—C161.527 (12)
N4—C61.126 (13)C15—H15A0.9700
N5—C151.516 (10)C15—H15B0.9700
N5—C71.525 (10)C16—C171.537 (12)
N5—C111.527 (10)C16—H16A0.9700
N5—C191.532 (11)C16—H16B0.9700
C1—C21.434 (12)C17—C181.519 (13)
C3—C41.412 (14)C17—H17A0.9700
C3—C51.452 (15)C17—H17B0.9700
C4—C61.469 (16)C18—H18A0.9600
C7—C81.513 (12)C18—H18B0.9600
C7—H7A0.9700C18—H18C0.9600
C7—H7B0.9700C19—C201.508 (13)
C8—C91.520 (12)C19—H19A0.9700
C8—H8A0.9700C19—H19B0.9700
C8—H8B0.9700C20—C211.514 (13)
C9—C101.542 (13)C20—H20A0.9700
C9—H9A0.9700C20—H20B0.9700
C9—H9B0.9700C21—C221.488 (15)
C10—H10A0.9600C21—H21A0.9700
C10—H10B0.9600C21—H21B0.9700
C10—H10C0.9600C22—H22A0.9600
C11—C121.497 (12)C22—H22B0.9600
C11—H11A0.9700C22—H22C0.9600
S1i—Pd1—S1180.00 (15)C11—C12—H12B109.7
S1i—Pd1—S290.61 (10)C13—C12—H12B109.7
S1—Pd1—S289.39 (10)H12A—C12—H12B108.2
S1i—Pd1—S2i89.39 (10)C14—C13—C12113.4 (11)
S1—Pd1—S2i90.61 (10)C14—C13—H13A108.9
S2—Pd1—S2i180.0C12—C13—H13A108.9
C1—S1—Pd1104.8 (4)C14—C13—H13B108.9
C2—S2—Pd1103.6 (4)C12—C13—H13B108.9
C1—N1—C3118.1 (9)H13A—C13—H13B107.7
C4—N2—C2117.0 (9)C13—C14—H14A109.5
C15—N5—C7105.9 (7)C13—C14—H14B109.5
C15—N5—C11112.2 (7)H14A—C14—H14B109.5
C7—N5—C11110.8 (7)C13—C14—H14C109.5
C15—N5—C19110.3 (7)H14A—C14—H14C109.5
C7—N5—C19111.4 (7)H14B—C14—H14C109.5
C11—N5—C19106.3 (7)N5—C15—C16115.8 (7)
N1—C1—C2122.7 (11)N5—C15—H15A108.3
N1—C1—S1117.7 (7)C16—C15—H15A108.3
C2—C1—S1119.6 (9)N5—C15—H15B108.3
N2—C2—C1119.2 (11)C16—C15—H15B108.3
N2—C2—S2118.3 (8)H15A—C15—H15B107.4
C1—C2—S2122.5 (9)C15—C16—C17110.7 (8)
N1—C3—C4119.6 (11)C15—C16—H16A109.5
N1—C3—C5119.5 (10)C17—C16—H16A109.5
C4—C3—C5120.8 (12)C15—C16—H16B109.5
N2—C4—C3123.5 (11)C17—C16—H16B109.5
N2—C4—C6120.8 (10)H16A—C16—H16B108.1
C3—C4—C6115.7 (12)C18—C17—C16111.2 (8)
N3—C5—C3174.2 (13)C18—C17—H17A109.4
N4—C6—C4178.9 (15)C16—C17—H17A109.4
C8—C7—N5114.8 (8)C18—C17—H17B109.4
C8—C7—H7A108.6C16—C17—H17B109.4
N5—C7—H7A108.6H17A—C17—H17B108.0
C8—C7—H7B108.6C17—C18—H18A109.5
N5—C7—H7B108.6C17—C18—H18B109.5
H7A—C7—H7B107.5H18A—C18—H18B109.5
C7—C8—C9112.6 (9)C17—C18—H18C109.5
C7—C8—H8A109.1H18A—C18—H18C109.5
C9—C8—H8A109.1H18B—C18—H18C109.5
C7—C8—H8B109.1C20—C19—N5117.6 (8)
C9—C8—H8B109.1C20—C19—H19A107.9
H8A—C8—H8B107.8N5—C19—H19A107.9
C8—C9—C10111.1 (9)C20—C19—H19B107.9
C8—C9—H9A109.4N5—C19—H19B107.9
C10—C9—H9A109.4H19A—C19—H19B107.2
C8—C9—H9B109.4C19—C20—C21107.8 (9)
C10—C9—H9B109.4C19—C20—H20A110.1
H9A—C9—H9B108.0C21—C20—H20A110.1
C9—C10—H10A109.5C19—C20—H20B110.1
C9—C10—H10B109.5C21—C20—H20B110.1
H10A—C10—H10B109.5H20A—C20—H20B108.5
C9—C10—H10C109.5C22—C21—C20113.3 (11)
H10A—C10—H10C109.5C22—C21—H21A108.9
H10B—C10—H10C109.5C20—C21—H21A108.9
C12—C11—N5116.3 (8)C22—C21—H21B108.9
C12—C11—H11A108.2C20—C21—H21B108.9
N5—C11—H11A108.2H21A—C21—H21B107.7
C12—C11—H11B108.2C21—C22—H22A109.5
N5—C11—H11B108.2C21—C22—H22B109.5
H11A—C11—H11B107.4H22A—C22—H22B109.5
C11—C12—C13110.0 (9)C21—C22—H22C109.5
C11—C12—H12A109.7H22A—C22—H22C109.5
C13—C12—H12A109.7H22B—C22—H22C109.5
S2—Pd1—S1—C1−2.2 (3)N1—C3—C4—C6−178.7 (9)
S2i—Pd1—S1—C1177.8 (3)C5—C3—C4—C60.8 (15)
S1i—Pd1—S2—C2−177.6 (3)C15—N5—C7—C8−178.6 (9)
S1—Pd1—S2—C22.4 (3)C11—N5—C7—C859.4 (10)
C3—N1—C1—C2−0.7 (13)C19—N5—C7—C8−58.7 (11)
C3—N1—C1—S1178.5 (7)N5—C7—C8—C9178.5 (8)
Pd1—S1—C1—N1−177.7 (6)C7—C8—C9—C10−178.1 (9)
Pd1—S1—C1—C21.6 (7)C15—N5—C11—C12−60.9 (10)
C4—N2—C2—C1−0.4 (14)C7—N5—C11—C1257.3 (10)
C4—N2—C2—S2−179.5 (8)C19—N5—C11—C12178.5 (8)
N1—C1—C2—N20.6 (14)N5—C11—C12—C13−176.3 (8)
S1—C1—C2—N2−178.6 (7)C11—C12—C13—C14−178.4 (10)
N1—C1—C2—S2179.7 (7)C7—N5—C15—C16175.8 (8)
S1—C1—C2—S20.5 (11)C11—N5—C15—C16−63.1 (11)
Pd1—S2—C2—N2176.8 (7)C19—N5—C15—C1655.2 (11)
Pd1—S2—C2—C1−2.3 (8)N5—C15—C16—C17−177.1 (8)
C1—N1—C3—C40.6 (14)C15—C16—C17—C18177.6 (10)
C1—N1—C3—C5−178.9 (8)C15—N5—C19—C2057.1 (10)
C2—N2—C4—C30.3 (16)C7—N5—C19—C20−60.2 (11)
C2—N2—C4—C6178.5 (9)C11—N5—C19—C20179.0 (8)
N1—C3—C4—N2−0.4 (16)N5—C19—C20—C21−175.2 (8)
C5—C3—C4—N2179.2 (10)C19—C20—C21—C22−178.6 (11)
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