Literature DB >> 22259340

Bis{2-[(pyridin-4-yl-κN)sulfan-yl]pyrazine}-silver(I) tetra-fluoridoborate.

Zi-Jia Wang1.   

Abstract

In the title mononuclear complex, [Ag(C(9)H(7)N(3)S)(2)]BF(4), the Ag(I) ion adopts a virtually linear coordination geometry [N-Ag-N = 178.06 (11)°] with the two ligands bound to the metal atom via the pyridine N atoms. The metal-coordinated pyridine rings are almost coplanar, making a dihedral angle of 1.5 (2)°, while the two pendent pyrazine rings are arranged on the same side of the N-Ag-N line. Along the a axis, the mononuclear coordination units are stacked with π-π inter-actions between the pyridine rings [centroid-centroid distance = 3.569 (4) Å], leading to infinite chains. The chains are inter-connected through inter-molecular N(pyrazine)⋯π(pyrazine) inter-actions forming layers parallel to the ab plane [N⋯centroid = 3.268 (5) Å]. These layers are further stacked along the c-axis direction, furnishing a three-dimensional supra-molecular framework with the tetra-fluoridoborate anions embedded within the inter-stices.

Entities:  

Year:  2011        PMID: 22259340      PMCID: PMC3254277          DOI: 10.1107/S1600536811051270

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal complexes with chalcogenobispyridines and derivates, see: Baradello et al. (2004 ▶); Dunne et al. (1997 ▶). For the crystal structures of di-2-pyridyl sulfide and its N-positional isomer complexes, see: Jung et al. (2001 ▶, 2003 ▶). For the N(pyrazin­yl)⋯centroid(pyrazin­yl) distance in {[Ni(L)(NO3)2]}∞ (L = bis­(2-pyrazylmeth­yl)sulfide), see: Black et al. (2007 ▶); For van der Waals radii, see: Bondi (1964 ▶) and for the half thickness of phenyl rings, see: Malone et al. (1997 ▶).

Experimental

Crystal data

[Ag(C9H7N3S)2]BF4 M = 573.15 Monoclinic, a = 7.2232 (2) Å b = 16.4826 (3) Å c = 17.6098 (4) Å β = 91.666 (1)° V = 2095.69 (8) Å3 Z = 4 Mo Kα radiation μ = 1.22 mm−1 T = 296 K 0.40 × 0.30 × 0.20 mm

Data collection

Bruker SMART APEXII CCD area-detector’ diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.616, T max = 0.746 14794 measured reflections 3597 independent reflections 3215 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.116 S = 1.11 3597 reflections 289 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.62 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811051270/zq2141sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811051270/zq2141Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag(C9H7N3S)2]BF4Z = 4
Mr = 573.15F(000) = 1136
Monoclinic, P21/nDx = 1.817 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 7.2232 (2) ŵ = 1.22 mm1
b = 16.4826 (3) ÅT = 296 K
c = 17.6098 (4) ÅBlock, yellow
β = 91.666 (1)°0.40 × 0.30 × 0.20 mm
V = 2095.69 (8) Å3
'Bruker SMART APEXII CCD area-detector' diffractometer3597 independent reflections
Radiation source: fine-focus sealed tube3215 reflections with I > 2σ(I)
graphiteRint = 0.028
ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −8→8
Tmin = 0.616, Tmax = 0.746k = −19→19
14794 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0584P)2 + 2.8465P] P = (Fo2 + 2Fc2)/3
3597 reflections(Δ/σ)max = 0.001
289 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.62 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ag10.49553 (4)0.746244 (18)0.040102 (19)0.04882 (15)
S11.31192 (14)0.55322 (8)0.04143 (6)0.0556 (3)
S2−0.31897 (14)0.94030 (8)0.04687 (6)0.0554 (3)
N11.3844 (4)0.62555 (19)0.1758 (2)0.0456 (8)
N21.5853 (5)0.4934 (2)0.2314 (2)0.0557 (9)
N30.7552 (4)0.68164 (18)0.04124 (17)0.0392 (7)
N40.2344 (4)0.81040 (18)0.04305 (18)0.0409 (7)
N5−0.3990 (4)0.85798 (19)0.1733 (2)0.0459 (8)
N6−0.5935 (5)0.9876 (2)0.2337 (2)0.0582 (10)
C11.4578 (6)0.6243 (3)0.2450 (3)0.0532 (10)
H1A1.43930.66850.27670.064*
C21.5609 (6)0.5599 (3)0.2723 (3)0.0576 (11)
H2A1.61500.56300.32080.069*
C31.5056 (6)0.4919 (2)0.1643 (2)0.0482 (9)
H3A1.51640.44560.13460.058*
C41.4040 (5)0.5577 (2)0.1353 (2)0.0387 (8)
C51.0957 (5)0.6030 (2)0.0462 (2)0.0378 (8)
C61.0216 (6)0.6326 (3)−0.0213 (2)0.0499 (10)
H6A1.08620.6276−0.06600.060*
C70.8514 (6)0.6697 (3)−0.0217 (2)0.0487 (10)
H7A0.80050.6874−0.06790.058*
C80.8306 (5)0.6540 (3)0.1058 (2)0.0458 (9)
H8A0.76670.66260.15020.055*
C90.9972 (5)0.6135 (3)0.1114 (2)0.0479 (10)
H9A1.04210.59380.15790.057*
C100.1515 (6)0.8409 (3)−0.0177 (3)0.0569 (11)
H10A0.21100.8369−0.06370.068*
C11−0.0205 (6)0.8788 (3)−0.0173 (2)0.0546 (11)
H11A−0.07790.8967−0.06220.066*
C12−0.1045 (5)0.8893 (2)0.0520 (2)0.0398 (8)
C13−0.0160 (5)0.8602 (3)0.1160 (2)0.0472 (9)
H13A−0.06760.86710.16340.057*
C140.1513 (5)0.8204 (3)0.1094 (2)0.0462 (9)
H14A0.20890.79970.15320.055*
C15−0.4147 (5)0.9284 (2)0.1376 (2)0.0373 (8)
C16−0.4753 (6)0.8546 (3)0.2415 (3)0.0560 (11)
H16A−0.46090.80770.27030.067*
C17−0.5735 (6)0.9177 (3)0.2701 (3)0.0580 (11)
H17A−0.62830.91150.31690.070*
C18−0.5097 (6)0.9934 (2)0.1678 (2)0.0457 (9)
H18A−0.51481.04220.14120.055*
B10.4920 (7)0.7584 (3)−0.1658 (3)0.0479 (11)
F10.5771 (6)0.8120 (2)−0.1155 (2)0.0970 (11)
F20.4070 (6)0.7015 (2)−0.1210 (2)0.0977 (11)
F30.3676 (6)0.7987 (3)−0.2082 (3)0.1304 (16)
F40.6212 (6)0.7205 (3)−0.2054 (3)0.1233 (15)
U11U22U33U12U13U23
Ag10.0314 (2)0.0524 (2)0.0627 (2)0.01446 (12)0.00139 (14)−0.00343 (13)
S10.0364 (5)0.0807 (8)0.0494 (6)0.0263 (5)−0.0019 (4)−0.0044 (5)
S20.0389 (5)0.0792 (8)0.0483 (6)0.0271 (5)0.0076 (4)0.0090 (5)
N10.0355 (17)0.0401 (17)0.061 (2)0.0034 (13)0.0009 (15)0.0044 (15)
N20.053 (2)0.057 (2)0.056 (2)0.0147 (17)−0.0056 (17)0.0105 (17)
N30.0299 (15)0.0427 (17)0.0450 (17)0.0059 (12)−0.0009 (13)−0.0034 (13)
N40.0309 (15)0.0422 (17)0.0496 (18)0.0059 (12)0.0039 (13)0.0010 (13)
N50.0373 (17)0.0398 (17)0.061 (2)0.0029 (13)0.0068 (15)−0.0034 (15)
N60.057 (2)0.061 (2)0.057 (2)0.0122 (17)0.0154 (18)−0.0127 (18)
C10.045 (2)0.050 (2)0.064 (3)0.0002 (18)0.001 (2)−0.0068 (19)
C20.048 (2)0.071 (3)0.054 (3)0.004 (2)−0.0018 (19)0.004 (2)
C30.046 (2)0.042 (2)0.057 (2)0.0077 (17)0.0040 (18)0.0045 (18)
C40.0239 (16)0.042 (2)0.051 (2)0.0038 (14)0.0030 (15)0.0082 (16)
C50.0277 (17)0.0403 (19)0.045 (2)0.0046 (14)−0.0009 (14)−0.0010 (15)
C60.042 (2)0.068 (3)0.040 (2)0.0146 (19)0.0011 (16)−0.0026 (18)
C70.040 (2)0.065 (3)0.041 (2)0.0171 (18)−0.0053 (16)0.0010 (18)
C80.0258 (17)0.067 (3)0.045 (2)0.0037 (17)0.0081 (15)0.0042 (18)
C90.0332 (19)0.067 (3)0.044 (2)0.0065 (17)0.0023 (16)0.0182 (18)
C100.052 (2)0.066 (3)0.054 (2)0.023 (2)0.023 (2)0.010 (2)
C110.051 (2)0.072 (3)0.041 (2)0.026 (2)0.0096 (18)0.015 (2)
C120.0314 (18)0.0379 (19)0.050 (2)0.0032 (14)0.0055 (15)−0.0012 (15)
C130.0333 (19)0.067 (3)0.041 (2)0.0074 (18)0.0025 (15)−0.0054 (18)
C140.0289 (18)0.064 (2)0.046 (2)0.0058 (17)−0.0004 (15)−0.0009 (18)
C150.0248 (16)0.0421 (19)0.0450 (19)0.0033 (14)0.0010 (14)−0.0050 (15)
C160.048 (2)0.053 (3)0.067 (3)−0.0004 (19)0.008 (2)0.014 (2)
C170.052 (3)0.075 (3)0.048 (2)0.009 (2)0.0100 (19)0.002 (2)
C180.042 (2)0.042 (2)0.054 (2)0.0072 (16)0.0028 (17)−0.0039 (17)
B10.055 (3)0.053 (3)0.036 (2)0.010 (2)0.002 (2)−0.0037 (18)
F10.132 (3)0.073 (2)0.085 (2)−0.0111 (19)−0.030 (2)−0.0048 (16)
F20.129 (3)0.073 (2)0.093 (2)−0.013 (2)0.034 (2)0.0027 (17)
F30.127 (4)0.134 (4)0.127 (4)0.035 (3)−0.057 (3)0.029 (3)
F40.124 (3)0.130 (3)0.119 (3)0.032 (3)0.061 (3)−0.021 (3)
Ag1—N32.156 (3)C5—C91.380 (5)
Ag1—N42.165 (3)C6—C71.373 (6)
S1—C41.765 (4)C6—H6A0.9300
S1—C51.768 (3)C7—H7A0.9300
S2—C121.763 (4)C8—C91.378 (5)
S2—C151.770 (4)C8—H8A0.9300
N1—C11.315 (6)C9—H9A0.9300
N1—C41.337 (5)C10—C111.391 (6)
N2—C31.300 (6)C10—H10A0.9300
N2—C21.326 (6)C11—C121.389 (5)
N3—C81.327 (5)C11—H11A0.9300
N3—C71.340 (5)C12—C131.366 (6)
N4—C101.311 (5)C13—C141.383 (5)
N4—C141.339 (5)C13—H13A0.9300
N5—C151.324 (5)C14—H14A0.9300
N5—C161.336 (6)C15—C181.386 (5)
N6—C171.324 (6)C16—C171.364 (6)
N6—C181.328 (5)C16—H16A0.9300
C1—C21.376 (6)C17—H17A0.9300
C1—H1A0.9300C18—H18A0.9300
C2—H2A0.9300B1—F31.330 (6)
C3—C41.397 (5)B1—F41.337 (6)
C3—H3A0.9300B1—F21.380 (6)
C5—C61.378 (5)B1—F11.382 (6)
N3—Ag1—N4178.06 (11)C8—C9—C5118.1 (4)
C4—S1—C5104.22 (17)C8—C9—H9A120.9
C12—S2—C15105.47 (18)C5—C9—H9A120.9
C1—N1—C4115.8 (3)N4—C10—C11123.6 (4)
C3—N2—C2116.6 (4)N4—C10—H10A118.2
C8—N3—C7116.7 (3)C11—C10—H10A118.2
C8—N3—Ag1120.8 (2)C12—C11—C10118.3 (4)
C7—N3—Ag1122.5 (3)C12—C11—H11A120.9
C10—N4—C14117.4 (3)C10—C11—H11A120.9
C10—N4—Ag1123.0 (3)C13—C12—C11118.4 (3)
C14—N4—Ag1119.6 (3)C13—C12—S2126.8 (3)
C15—N5—C16115.5 (3)C11—C12—S2114.8 (3)
C17—N6—C18116.1 (4)C12—C13—C14119.1 (4)
N1—C1—C2122.4 (4)C12—C13—H13A120.5
N1—C1—H1A118.8C14—C13—H13A120.5
C2—C1—H1A118.8N4—C14—C13123.1 (4)
N2—C2—C1121.8 (4)N4—C14—H14A118.4
N2—C2—H2A119.1C13—C14—H14A118.4
C1—C2—H2A119.1N5—C15—C18122.2 (3)
N2—C3—C4122.1 (4)N5—C15—S2119.7 (3)
N2—C3—H3A118.9C18—C15—S2118.1 (3)
C4—C3—H3A118.9N5—C16—C17122.2 (4)
N1—C4—C3121.1 (4)N5—C16—H16A118.9
N1—C4—S1119.5 (3)C17—C16—H16A118.9
C3—C4—S1119.3 (3)N6—C17—C16122.3 (4)
C6—C5—C9118.4 (3)N6—C17—H17A118.8
C6—C5—S1116.4 (3)C16—C17—H17A118.8
C9—C5—S1125.1 (3)N6—C18—C15121.5 (4)
C7—C6—C5119.2 (4)N6—C18—H18A119.3
C7—C6—H6A120.4C15—C18—H18A119.3
C5—C6—H6A120.4F3—B1—F4114.3 (5)
N3—C7—C6123.1 (4)F3—B1—F2110.8 (5)
N3—C7—H7A118.4F4—B1—F2108.0 (4)
C6—C7—H7A118.4F3—B1—F1108.7 (4)
N3—C8—C9124.3 (3)F4—B1—F1109.2 (5)
N3—C8—H8A117.8F2—B1—F1105.4 (4)
C9—C8—H8A117.8
C4—N1—C1—C24.9 (6)C14—N4—C10—C11−3.5 (7)
C3—N2—C2—C1−0.5 (7)Ag1—N4—C10—C11176.8 (4)
N1—C1—C2—N2−3.1 (7)N4—C10—C11—C123.9 (8)
C2—N2—C3—C42.0 (6)C10—C11—C12—C13−1.4 (7)
C1—N1—C4—C3−3.4 (5)C10—C11—C12—S2178.4 (4)
C1—N1—C4—S1−179.6 (3)C15—S2—C12—C13−11.0 (4)
N2—C3—C4—N1−0.1 (6)C15—S2—C12—C11169.1 (3)
N2—C3—C4—S1176.1 (3)C11—C12—C13—C14−1.1 (6)
C5—S1—C4—N1−40.5 (3)S2—C12—C13—C14179.1 (3)
C5—S1—C4—C3143.3 (3)C10—N4—C14—C130.6 (6)
C4—S1—C5—C6158.8 (3)Ag1—N4—C14—C13−179.6 (3)
C4—S1—C5—C9−21.7 (4)C12—C13—C14—N41.6 (7)
C9—C5—C6—C7−1.5 (7)C16—N5—C15—C18−2.2 (6)
S1—C5—C6—C7178.1 (3)C16—N5—C15—S2180.0 (3)
C8—N3—C7—C6−1.4 (6)C12—S2—C15—N5−40.4 (3)
Ag1—N3—C7—C6176.3 (3)C12—S2—C15—C18141.7 (3)
C5—C6—C7—N32.7 (7)C15—N5—C16—C174.3 (6)
C7—N3—C8—C9−1.1 (6)C18—N6—C17—C16−1.0 (7)
Ag1—N3—C8—C9−178.8 (3)N5—C16—C17—N6−2.8 (8)
N3—C8—C9—C52.1 (7)C17—N6—C18—C153.0 (7)
C6—C5—C9—C8−0.7 (6)N5—C15—C18—N6−1.4 (6)
S1—C5—C9—C8179.7 (3)S2—C15—C18—N6176.4 (3)
  5 in total

1.  Structures and related properties of AgX bearing 3,3'-thiobispyridine (X- = NO3-, BF4-, CLO4-, and PF6-.

Authors:  O S Jung; Y J Kim; Y A Lee; H K Chae; H G Jang; J Hong
Journal:  Inorg Chem       Date:  2001-04-23       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Probing anion-pi interactions in 1-D Co(II), Ni(II), and Cd(II) coordination polymers containing flexible pyrazine ligands.

Authors:  Cory A Black; Lyall R Hanton; Mark D Spicer
Journal:  Inorg Chem       Date:  2007-03-16       Impact factor: 5.165

4.  Subtle role of polyatomic anions in molecular construction: structures and properties of AgX bearing 2,4'-thiobis(pyridine) (X(-) = NO(3)(-), BF(4)(-), ClO(4)(-), PF(6)(-), CF(3)CO(2)(-), and CF(3)SO(3)(-)).

Authors:  Ok-Sang Jung; Yun Ju Kim; Young-A Lee; Ki-Min Park; Shim Sung Lee
Journal:  Inorg Chem       Date:  2003-02-10       Impact factor: 5.165

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  1 in total

1.  Bis[2-(thio-phen-2-yl)quinoxaline-κN (4)]silver(I) tetra-fluoridoborate.

Authors:  Guy Crundwell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-02-23
  1 in total

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