Literature DB >> 22259202

Evaluation of adding a second marker to overcome Staphylococcus aureus spa typing homoplasies.

P Basset1, U Nübel, W Witte, D S Blanc.   

Abstract

The utility of sequencing a second highly variable locus in addition to the spa gene (e.g., double-locus sequence typing [DLST]) was investigated to overcome limitations of a Staphylococcus aureus single-locus typing method. Although adding a second locus seemed to increase discriminatory power, it was not sufficient to definitively infer evolutionary relationships within a single multilocus sequence type (ST-5).

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Year:  2012        PMID： 22259202      PMCID： PMC3318513          DOI： 10.1128/JCM.00664-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  13 in total

1.  Frequent emergence and limited geographic dispersal of methicillin-resistant Staphylococcus aureus.

Authors:  Ulrich Nübel; Philippe Roumagnac; Mirjam Feldkamp; Jae-Hoon Song; Kwan Soo Ko; Yhu-Chering Huang; Geoffrey Coombs; Margaret Ip; Henrik Westh; Robert Skov; Marc J Struelens; Richard V Goering; Birgit Strommenger; Annette Weller; Wolfgang Witte; Mark Achtman
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2.  Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty.

Authors:  Joe Parker; Andrew Rambaut; Oliver G Pybus
Journal:  Infect Genet Evol       Date:  2007-08-21       Impact factor: 3.342

3.  Molecular typing of methicillin-resistant Staphylococcus aureus on the basis of protein A gene polymorphism.

Authors:  H M Frénay; A E Bunschoten; L M Schouls; W J van Leeuwen; C M Vandenbroucke-Grauls; J Verhoef; F R Mooi
Journal:  Eur J Clin Microbiol Infect Dis       Date:  1996-01       Impact factor: 3.267

4.  Investigation of classical epidemiological links between patients harbouring identical, non-predominant meticillin-resistant Staphylococcus aureus genotypes and lessons for epidemiological tracking.

Authors:  L Senn; G Zanetti; F Bally; C Chuard; A Cometta; M Burr; M-C Eisenring; P Basset; D S Blanc
Journal:  J Hosp Infect       Date:  2011-07-07       Impact factor: 3.926

5.  Statistical properties of the number of recombination events in the history of a sample of DNA sequences.

Authors:  R R Hudson; N L Kaplan
Journal:  Genetics       Date:  1985-09       Impact factor: 4.562

6.  Evaluation of protein A gene polymorphic region DNA sequencing for typing of Staphylococcus aureus strains.

Authors:  B Shopsin; M Gomez; S O Montgomery; D H Smith; M Waddington; D E Dodge; D A Bost; M Riehman; S Naidich; B N Kreiswirth
Journal:  J Clin Microbiol       Date:  1999-11       Impact factor: 5.948

7.  Double-locus sequence typing using clfB and spa, a fast and simple method for epidemiological typing of methicillin-resistant Staphylococcus aureus.

Authors:  G Kuhn; P Francioli; D S Blanc
Journal:  J Clin Microbiol       Date:  2006-11-08       Impact factor: 5.948

8.  Usefulness of double locus sequence typing (DLST) for regional and international epidemiological surveillance of methicilin-resistant Staphylococcus aureus.

Authors:  P Basset; L Senn; G Prod'hom; J Bille; P Francioli; G Zanetti; D S Blanc
Journal:  Clin Microbiol Infect       Date:  2009-10-14       Impact factor: 8.067

9.  Evolution of MRSA during hospital transmission and intercontinental spread.

Authors:  Simon R Harris; Edward J Feil; Matthew T G Holden; Michael A Quail; Emma K Nickerson; Narisara Chantratita; Susana Gardete; Ana Tavares; Nick Day; Jodi A Lindsay; Jonathan D Edgeworth; Hermínia de Lencastre; Julian Parkhill; Sharon J Peacock; Stephen D Bentley
Journal:  Science       Date:  2010-01-22       Impact factor: 47.728

10.  Staphylococcus aureus clfB and spa alleles of the repeat regions are segregated into major phylogenetic lineages.

Authors:  Patrick Basset; Nevena Basic Hammer; Gerrit Kuhn; Valérie Vogel; Olga Sakwinska; Dominique S Blanc
Journal:  Infect Genet Evol       Date:  2009-06-25       Impact factor: 3.342
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  4 in total

1.  DNAGear--a free software for spa type identification in Staphylococcus aureus.

Authors:  Faroq AL-Tam; Anne-Sophie Brunel; Nicolas Bouzinbi; Philippe Corne; Anne-Laure Bañuls; Hamid Reza Shahbazkia
Journal:  BMC Res Notes       Date:  2012-11-19

2.  Subpopulations of Staphylococcus aureus clonal complex 121 are associated with distinct clinical entities.

Authors:  Kevin Kurt; Jean-Philippe Rasigade; Frederic Laurent; Richard V Goering; Helena Žemličková; Ivana Machova; Marc J Struelens; Andreas E Zautner; Silva Holtfreter; Barbara Bröker; Stephen Ritchie; Sin Reaksmey; Direk Limmathurotsakul; Sharon J Peacock; Christiane Cuny; Franziska Layer; Wolfgang Witte; Ulrich Nübel
Journal:  PLoS One       Date:  2013-03-07       Impact factor: 3.240

3.  An assessment on DNA microarray and sequence-based methods for the characterization of methicillin-susceptible Staphylococcus aureus from Nigeria.

Authors:  Adebayo O Shittu; Omotayo Oyedara; Kenneth Okon; Adeola Raji; Georg Peters; Lutz von Müller; Frieder Schaumburg; Mathias Herrmann; Ulla Ruffing
Journal:  Front Microbiol       Date:  2015-10-20       Impact factor: 5.640

4.  Rapid and robust phylotyping of spa t003, a dominant MRSA clone in Luxembourg and other European countries.

Authors:  David M Engelthaler; Erin Kelley; Elizabeth M Driebe; Jolene Bowers; Carl F Eberhard; Jesse Trujillo; Frederic Decruyenaere; James M Schupp; Joel Mossong; Paul Keim; Jos Even
Journal:  BMC Infect Dis       Date:  2013-07-23       Impact factor: 3.090
  4 in total

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