Literature DB >> 22255338

Classification of Alzheimer's Disease from structural MRI using sparse logistic regression with optional spatial regularization.

Anil Rao1, Ying Lee, Achim Gass, Andreas Monsch.   

Abstract

In this paper, we apply Sparse Logistic Regression Classifiers to the classification of 69 Alzheimer's Disease and 60 normal control subjects based on voxel-wise grey matter volumes derived from structural MRI. Methods such as standard logistic regression cannot be used in such problems because of the large number of voxels in comparison to the number of training subjects. Sparse Logistic Regression (SLR) addresses this issue by incorporating a sparsity penalty into the log-likelihood, which effects an automatic feature selection within the classification framework. We apply two different formulations of sparse logistic regression and compare their classification accuracy with that of Penalized Logistic Regression (PLR) and Maximum uncertainty Linear Discriminant Analysis (MLDA). In the first approach, we use the original formulation of SLR in which correlated voxels are forced to have similar weights. In the second approach we use a spatially regularized formulation, SRSLR, to force the discriminating vector to be spatially smooth when viewed as an image. Evaluation of the methods using cross-validation shows similar classification accuracies for SLR and SRSLR, with both performing better than PLR and MLDA. In addition, SRSLR produced classifiers that were spatially smoother than those produced by SLR, which may better reflect the regional effects of Alzheimer's Disease.

Entities:  

Mesh:

Year:  2011        PMID: 22255338     DOI: 10.1109/IEMBS.2011.6091115

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  7 in total

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3.  Extracting patterns of morphometry distinguishing HIV associated neurodegeneration from mild cognitive impairment via group cardinality constrained classification.

Authors:  Yong Zhang; Dongjin Kwon; Pardis Esmaeili-Firidouni; Adolf Pfefferbaum; Edith V Sullivan; Harold Javitz; Victor Valcour; Kilian M Pohl
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5.  Computing group cardinality constraint solutions for logistic regression problems.

Authors:  Yong Zhang; Dongjin Kwon; Kilian M Pohl
Journal:  Med Image Anal       Date:  2016-06-11       Impact factor: 8.545

6.  A multiple hold-out framework for Sparse Partial Least Squares.

Authors:  João M Monteiro; Anil Rao; John Shawe-Taylor; Janaina Mourão-Miranda
Journal:  J Neurosci Methods       Date:  2016-06-26       Impact factor: 2.390

7.  Multivariate pattern analysis strategies in detection of remitted major depressive disorder using resting state functional connectivity.

Authors:  Runa Bhaumik; Lisanne M Jenkins; Jennifer R Gowins; Rachel H Jacobs; Alyssa Barba; Dulal K Bhaumik; Scott A Langenecker
Journal:  Neuroimage Clin       Date:  2016-03-02       Impact factor: 4.881

  7 in total

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