Literature DB >> 22249416

On the spectral formulation of Granger causality.

D Chicharro1.   

Abstract

Spectral measures of causality are used to explore the role of different rhythms in the causal connectivity between brain regions. We study several spectral measures related to Granger causality, comprising the bivariate and conditional Geweke measures, the directed transfer function, and the partial directed coherence. We derive the formulation of dependence and causality in the spectral domain from the more general formulation in the information-theory framework. We argue that the transfer entropy, the most general measure derived from the concept of Granger causality, lacks a spectral representation in terms of only the processes associated with the recorded signals. For all the spectral measures we show how they are related to mutual information rates when explicitly considering the parametric autoregressive representation of the processes. In this way we express the conditional Geweke spectral measure in terms of a multiple coherence involving innovation variables inherent to the autoregressive representation. We also link partial directed coherence with Sims' criterion of causality. Given our results, we discuss the causal interpretation of the spectral measures related to Granger causality and stress the necessity to explicitly consider their specific formulation based on modeling the signals as linear Gaussian stationary autoregressive processes.

Mesh:

Year:  2012        PMID: 22249416     DOI: 10.1007/s00422-011-0469-z

Source DB:  PubMed          Journal:  Biol Cybern        ISSN: 0340-1200            Impact factor:   2.086


  20 in total

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4.  NetPyNE Implementation and Scaling of the Potjans-Diesmann Cortical Microcircuit Model.

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6.  Algorithms of causal inference for the analysis of effective connectivity among brain regions.

Authors:  Daniel Chicharro; Stefano Panzeri
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7.  Characterization of Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary Visuomotor Mapping.

Authors:  Andrea Brovelli; Daniel Chicharro; Jean-Michel Badier; Huifang Wang; Viktor Jirsa
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Review 8.  Nonlinear System Identification of Neural Systems from Neurophysiological Signals.

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Journal:  Neuroscience       Date:  2020-12-11       Impact factor: 3.590

9.  When two become one: the limits of causality analysis of brain dynamics.

Authors:  Daniel Chicharro; Anders Ledberg
Journal:  PLoS One       Date:  2012-03-16       Impact factor: 3.240

10.  Statistical analysis of single-trial Granger causality spectra.

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Journal:  Comput Math Methods Med       Date:  2012-05-10       Impact factor: 2.238

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