| Literature DB >> 22247716 |
Ilia A Guzei, Lara C Spencer, Tebogo V Segapelo, James Darkwa.
Abstract
The amine title complex, [ZnCl(2)(C(7)H(13)N(3))], resulted from imine hydrolysis in a Schiff base compound. The Zn metal atom has a distorted tetra-hedral geometry with the most significant deviation identified in the magnitude of the N-Zn-N angle. This deviation stems from the participation of the Zn and N atoms in a six-membered metallocyclic ring. The latter is in an approximate screw-boat conformation. Two strong N-H⋯Cl hydrogen bonds link the mol-ecules into ribbons propagating along the b-axis direction. The ribbons contain two second-order hydrogen-bonded motifs: a chain and a ring. The chain described by the graph set notation C(2) (2)(6) is formed by one hydrogen bond going in the forward direction (donor to acceptor) and the other in the backward direction (acceptor to donor). In the ring motif R(2) (2)(8), both hydrogen bonds propagate in the forward direction.Entities:
Year: 2011 PMID: 22247716 PMCID: PMC3253618 DOI: 10.1107/S1600536811044217
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [ZnCl2(C7H13N3)] | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 9893 reflections |
| θ = 4.9–69.5° | |
| µ = 7.00 mm−1 | |
| β = 97.95 (3)° | Block, colourless |
| 0.48 × 0.28 × 0.21 mm | |
| Bruker SMART APEXII area-detector diffractometer | 2123 independent reflections |
| Radiation source: fine-focus sealed tube | 2053 reflections with |
| graphite | |
| 0.50° ω and 0.5 ° φ scans | θmax = 70.0°, θmin = 5.5° |
| Absorption correction: multi-scan ( | |
| 16711 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2123 reflections | (Δ/σ)max = 0.001 |
| 120 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.57494 (2) | 0.15806 (2) | 0.280022 (13) | 0.01647 (8) | |
| Cl1 | 0.48746 (4) | −0.06529 (4) | 0.22820 (3) | 0.02530 (10) | |
| Cl2 | 0.53128 (4) | 0.33130 (4) | 0.16443 (3) | 0.02379 (10) | |
| N1 | 0.50886 (14) | 0.22053 (14) | 0.40401 (8) | 0.0181 (3) | |
| N2 | 0.60299 (14) | 0.29662 (15) | 0.47094 (9) | 0.0190 (3) | |
| N3 | 0.79922 (14) | 0.16142 (14) | 0.32554 (9) | 0.0197 (3) | |
| H3A | 0.8369 | 0.0670 | 0.3173 | 0.030* | |
| H3B | 0.8433 | 0.2264 | 0.2876 | 0.030* | |
| C1 | 0.25483 (18) | 0.1137 (2) | 0.38927 (12) | 0.0251 (3) | |
| H1A | 0.2064 | 0.1791 | 0.3389 | 0.030* | |
| H1C | 0.1835 | 0.0876 | 0.4324 | 0.030* | |
| H1B | 0.2894 | 0.0217 | 0.3613 | 0.030* | |
| C2 | 0.38499 (17) | 0.19396 (18) | 0.44299 (11) | 0.0198 (3) | |
| C3 | 0.40007 (18) | 0.25371 (18) | 0.53388 (11) | 0.0226 (3) | |
| H3 | 0.3282 | 0.2508 | 0.5765 | 0.027* | |
| C4 | 0.54005 (18) | 0.31816 (18) | 0.55017 (11) | 0.0213 (3) | |
| C5 | 0.61843 (19) | 0.3966 (2) | 0.63528 (11) | 0.0263 (3) | |
| H5B | 0.5498 | 0.4094 | 0.6821 | 0.032* | |
| H5A | 0.6527 | 0.4953 | 0.6168 | 0.032* | |
| H5C | 0.7042 | 0.3364 | 0.6628 | 0.032* | |
| C6 | 0.75227 (18) | 0.33978 (18) | 0.45274 (12) | 0.0229 (3) | |
| H6B | 0.8057 | 0.3882 | 0.5101 | 0.027* | |
| H6A | 0.7433 | 0.4145 | 0.4008 | 0.027* | |
| C7 | 0.84300 (17) | 0.2068 (2) | 0.42600 (11) | 0.0233 (3) | |
| H7B | 0.9501 | 0.2336 | 0.4360 | 0.028* | |
| H7A | 0.8286 | 0.1207 | 0.4678 | 0.028* |
| Zn1 | 0.01851 (12) | 0.01557 (12) | 0.01536 (12) | 0.00055 (7) | 0.00246 (8) | −0.00065 (7) |
| Cl1 | 0.02428 (19) | 0.01691 (18) | 0.0344 (2) | −0.00008 (14) | 0.00302 (15) | −0.00614 (15) |
| Cl2 | 0.0279 (2) | 0.02177 (19) | 0.02037 (19) | −0.00225 (14) | −0.00132 (15) | 0.00530 (13) |
| N1 | 0.0190 (6) | 0.0199 (7) | 0.0151 (6) | −0.0028 (5) | 0.0018 (5) | −0.0018 (5) |
| N2 | 0.0185 (6) | 0.0220 (6) | 0.0164 (6) | −0.0032 (5) | 0.0024 (5) | −0.0029 (5) |
| N3 | 0.0200 (6) | 0.0183 (7) | 0.0213 (7) | 0.0008 (5) | 0.0043 (5) | 0.0008 (5) |
| C1 | 0.0209 (8) | 0.0301 (9) | 0.0247 (8) | −0.0056 (7) | 0.0044 (6) | −0.0018 (7) |
| C2 | 0.0202 (7) | 0.0201 (7) | 0.0190 (7) | 0.0001 (6) | 0.0030 (6) | 0.0031 (6) |
| C3 | 0.0240 (8) | 0.0268 (8) | 0.0181 (7) | −0.0012 (6) | 0.0066 (6) | 0.0011 (6) |
| C4 | 0.0247 (8) | 0.0220 (7) | 0.0173 (7) | 0.0012 (6) | 0.0036 (6) | 0.0004 (6) |
| C5 | 0.0296 (8) | 0.0311 (9) | 0.0182 (7) | −0.0024 (7) | 0.0036 (6) | −0.0043 (7) |
| C6 | 0.0198 (8) | 0.0282 (9) | 0.0211 (8) | −0.0062 (6) | 0.0041 (6) | −0.0037 (6) |
| C7 | 0.0186 (7) | 0.0313 (9) | 0.0197 (7) | 0.0020 (6) | 0.0011 (6) | 0.0022 (7) |
| Zn1—N1 | 2.0214 (13) | C1—H1B | 0.9800 |
| Zn1—N3 | 2.0461 (14) | C2—C3 | 1.390 (2) |
| Zn1—Cl1 | 2.2266 (6) | C3—C4 | 1.382 (2) |
| Zn1—Cl2 | 2.2512 (6) | C3—H3 | 0.9500 |
| N1—C2 | 1.340 (2) | C4—C5 | 1.492 (2) |
| N1—N2 | 1.3679 (18) | C5—H5B | 0.9800 |
| N2—C4 | 1.348 (2) | C5—H5A | 0.9800 |
| N2—C6 | 1.463 (2) | C5—H5C | 0.9800 |
| N3—C7 | 1.489 (2) | C6—C7 | 1.519 (2) |
| N3—H3A | 0.9200 | C6—H6B | 0.9900 |
| N3—H3B | 0.9200 | C6—H6A | 0.9900 |
| C1—C2 | 1.496 (2) | C7—H7B | 0.9900 |
| C1—H1A | 0.9800 | C7—H7A | 0.9900 |
| C1—H1C | 0.9800 | ||
| N1—Zn1—N3 | 96.88 (6) | C3—C2—C1 | 128.97 (14) |
| N1—Zn1—Cl1 | 113.62 (4) | C4—C3—C2 | 106.55 (14) |
| N3—Zn1—Cl1 | 114.24 (4) | C4—C3—H3 | 126.7 |
| N1—Zn1—Cl2 | 114.15 (4) | C2—C3—H3 | 126.7 |
| N3—Zn1—Cl2 | 106.77 (4) | N2—C4—C3 | 106.56 (14) |
| Cl1—Zn1—Cl2 | 110.44 (3) | N2—C4—C5 | 122.65 (14) |
| C2—N1—N2 | 105.95 (12) | C3—C4—C5 | 130.79 (15) |
| C2—N1—Zn1 | 132.88 (11) | C4—C5—H5B | 109.5 |
| N2—N1—Zn1 | 120.99 (10) | C4—C5—H5A | 109.5 |
| C4—N2—N1 | 111.10 (13) | H5B—C5—H5A | 109.5 |
| C4—N2—C6 | 128.32 (13) | C4—C5—H5C | 109.5 |
| N1—N2—C6 | 120.56 (12) | H5B—C5—H5C | 109.5 |
| C7—N3—Zn1 | 115.47 (10) | H5A—C5—H5C | 109.5 |
| C7—N3—H3A | 108.4 | N2—C6—C7 | 112.70 (13) |
| Zn1—N3—H3A | 108.4 | N2—C6—H6B | 109.1 |
| C7—N3—H3B | 108.4 | C7—C6—H6B | 109.1 |
| Zn1—N3—H3B | 108.4 | N2—C6—H6A | 109.1 |
| H3A—N3—H3B | 107.5 | C7—C6—H6A | 109.1 |
| C2—C1—H1A | 109.5 | H6B—C6—H6A | 107.8 |
| C2—C1—H1C | 109.5 | N3—C7—C6 | 111.80 (13) |
| H1A—C1—H1C | 109.5 | N3—C7—H7B | 109.3 |
| C2—C1—H1B | 109.5 | C6—C7—H7B | 109.3 |
| H1A—C1—H1B | 109.5 | N3—C7—H7A | 109.3 |
| H1C—C1—H1B | 109.5 | C6—C7—H7A | 109.3 |
| N1—C2—C3 | 109.84 (14) | H7B—C7—H7A | 107.9 |
| N1—C2—C1 | 121.18 (14) | ||
| N3—Zn1—N1—C2 | −151.81 (14) | N2—N1—C2—C1 | 179.17 (14) |
| Cl1—Zn1—N1—C2 | −31.54 (15) | Zn1—N1—C2—C1 | −5.9 (2) |
| Cl2—Zn1—N1—C2 | 96.31 (14) | N1—C2—C3—C4 | −0.41 (18) |
| N3—Zn1—N1—N2 | 22.52 (12) | C1—C2—C3—C4 | −179.06 (16) |
| Cl1—Zn1—N1—N2 | 142.79 (10) | N1—N2—C4—C3 | −0.02 (18) |
| Cl2—Zn1—N1—N2 | −89.35 (11) | C6—N2—C4—C3 | −178.15 (15) |
| C2—N1—N2—C4 | −0.23 (17) | N1—N2—C4—C5 | 179.25 (14) |
| Zn1—N1—N2—C4 | −175.91 (10) | C6—N2—C4—C5 | 1.1 (3) |
| C2—N1—N2—C6 | 178.07 (13) | C2—C3—C4—N2 | 0.25 (18) |
| Zn1—N1—N2—C6 | 2.38 (18) | C2—C3—C4—C5 | −178.94 (17) |
| N1—Zn1—N3—C7 | −0.89 (11) | C4—N2—C6—C7 | 122.45 (17) |
| Cl1—Zn1—N3—C7 | −120.69 (10) | N1—N2—C6—C7 | −55.52 (19) |
| Cl2—Zn1—N3—C7 | 116.93 (10) | Zn1—N3—C7—C6 | −42.60 (16) |
| N2—N1—C2—C3 | 0.39 (17) | N2—C6—C7—N3 | 78.30 (17) |
| Zn1—N1—C2—C3 | 175.34 (11) |
| H··· | ||||
| N3—H3A···Cl2i | 0.92 | 2.41 | 3.3073 (15) | 165. |
| N3—H3B···Cl1ii | 0.92 | 2.43 | 3.2620 (15) | 150. |
| Zn1—N1 | 2.0214 (13) |
| Zn1—N3 | 2.0461 (14) |
| Zn1—Cl1 | 2.2266 (6) |
| Zn1—Cl2 | 2.2512 (6) |
| N1—Zn1—N3 | 96.88 (6) |
| N1—Zn1—Cl1 | 113.62 (4) |
| N3—Zn1—Cl1 | 114.24 (4) |
| N1—Zn1—Cl2 | 114.15 (4) |
| N3—Zn1—Cl2 | 106.77 (4) |
| Cl1—Zn1—Cl2 | 110.44 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.92 | 2.41 | 3.3073 (15) | 165 |
| N3—H3 | 0.92 | 2.43 | 3.2620 (15) | 150 |
Symmetry codes: (i) ; (ii) .