Literature DB >> 22238638

Functional evolution of duplicated odorant-binding protein genes, Obp57d and Obp57e, in Drosophila.

Eriko Harada1, Jun Nakagawa, Tsunaki Asano, Masato Taoka, Hiroyuki Sorimachi, Yoshihiro Ito, Toshiro Aigaki, Takashi Matsuo.   

Abstract

Odorant-binding proteins (OBPs) are extracellular proteins found in insect chemosensilla, where they participate in the sensing of odors, tastes, and pheromones. Although a large number of OBP genes have been identified in insect genomes, their molecular functions and biological roles have been clarified in limited cases. Two OBP genes, Obp57d and Obp57e, were involved in the evolution of host-plant preference in Drosophila sechellia. Comparative analyses of the Obp57d/e genomic sequences from 27 closely related species suggested that the two genes arose by tandem gene duplication and functionally diverged from each other. In this study, the functional evolution of Obp57d and Obp57e was examined by in vitro binding assays using recombinant proteins synthesized in a bacterial system. Compared to the ancestral Dpse\OBP57de, Dmel\OBP57d was more specialized to tridecanoic acid while Dmel\OBP57e was generalized regarding their binding affinity, suggesting that the two OBP genes underwent subfunctionalization and neofunctionalization. A behavioral analysis using knockout flies supported that the biological role is different between OBP57d and OBP57e in vivo. Site-directed mutagenesis of the evolutionarily conserved amino acids revealed that these residues play an important role in protein folding. These findings provide a clue to understanding how the repertoire of OBP genes is maintained in a genome under natural selection.

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Year:  2012        PMID: 22238638      PMCID: PMC3253112          DOI: 10.1371/journal.pone.0029710

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  34 in total

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Authors:  L B Vosshall; H Amrein; P S Morozov; A Rzhetsky; R Axel
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2.  Biochemical characterization and bacterial expression of an odorant-binding protein from Locusta migratoria.

Authors:  L Ban; A Scaloni; C D'Ambrosio; L Zhang; Y Yahn; P Pelosi
Journal:  Cell Mol Life Sci       Date:  2003-02       Impact factor: 9.261

3.  Induction of cAMP response element-binding protein-dependent medium-term memory by appetitive gustatory reinforcement in Drosophila larvae.

Authors:  Ken Honjo; Katsuo Furukubo-Tokunaga
Journal:  J Neurosci       Date:  2005-08-31       Impact factor: 6.167

4.  Kinetics and molecular properties of pheromone binding and release.

Authors:  Walter S Leal; Angela M Chen; Yuko Ishida; Vicky P Chiang; Melissa L Erickson; Tania I Morgan; Jennifer M Tsuruda
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-22       Impact factor: 11.205

5.  Activation of pheromone-sensitive neurons is mediated by conformational activation of pheromone-binding protein.

Authors:  John D Laughlin; Tal Soo Ha; David N M Jones; Dean P Smith
Journal:  Cell       Date:  2008-06-27       Impact factor: 41.582

6.  Structural basis of the honey bee PBP pheromone and pH-induced conformational change.

Authors:  Marion E Pesenti; Silvia Spinelli; Valérie Bezirard; Loïc Briand; Jean-Claude Pernollet; Mariella Tegoni; Christian Cambillau
Journal:  J Mol Biol       Date:  2008-04-27       Impact factor: 5.469

7.  Futile cycling of intermediates of fatty acid biosynthesis toward peroxisomal beta-oxidation in Saccharomyces cerevisiae.

Authors:  Silvia Marchesini; Yves Poirier
Journal:  J Biol Chem       Date:  2003-06-20       Impact factor: 5.157

8.  Rapid evolution of two odorant-binding protein genes, Obp57d and Obp57e, in the Drosophila melanogaster species group.

Authors:  Takashi Matsuo
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

9.  Odorant-binding proteins OBP57d and OBP57e affect taste perception and host-plant preference in Drosophila sechellia.

Authors:  Takashi Matsuo; Shigeru Sugaya; Jyunichiro Yasukawa; Toshiro Aigaki; Yoshiaki Fuyama
Journal:  PLoS Biol       Date:  2007-05       Impact factor: 8.029

10.  Comparative genomic analysis of the odorant-binding protein family in 12 Drosophila genomes: purifying selection and birth-and-death evolution.

Authors:  Filipe G Vieira; Alejandro Sánchez-Gracia; Julio Rozas
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  15 in total

1.  A possible role of DNA methylation in functional divergence of a fast evolving duplicate gene encoding odorant binding protein 11 in the honeybee.

Authors:  R Kucharski; J Maleszka; R Maleszka
Journal:  Proc Biol Sci       Date:  2016-06-29       Impact factor: 5.349

2.  A novel mechanism of ligand binding and release in the odorant binding protein 20 from the malaria mosquito Anopheles gambiae.

Authors:  Brian P Ziemba; Emma J Murphy; Hannah T Edlin; David N M Jones
Journal:  Protein Sci       Date:  2012-11-29       Impact factor: 6.725

3.  Spatial Expression Analysis of Odorant Binding Proteins in Both Sexes of the Aphid Parasitoid Aphidius gifuensis and Their Ligand Binding Properties.

Authors:  Xin Jiang; Yaoguo Qin; Jun Jiang; Yun Xu; Frédéric Francis; Jia Fan; Julian Chen
Journal:  Front Physiol       Date:  2022-05-04       Impact factor: 4.755

4.  Identification of odor-processing genes in the emerald ash borer, Agrilus planipennis.

Authors:  Praveen Mamidala; Asela J Wijeratne; Saranga Wijeratne; Therese Poland; Sohail S Qazi; Daniel Doucet; Michel Cusson; Catherine Beliveau; Omprakash Mittapalli
Journal:  PLoS One       Date:  2013-02-12       Impact factor: 3.240

5.  Novel genes from formation to function.

Authors:  Rita Ponce; Lene Martinsen; Luís M Vicente; Daniel L Hartl
Journal:  Int J Evol Biol       Date:  2012-07-03

6.  An automated flow for directed evolution based on detection of promiscuous scaffolds using spatial and electrostatic properties of catalytic residues.

Authors:  Sandeep Chakraborty
Journal:  PLoS One       Date:  2012-07-11       Impact factor: 3.240

7.  Divergent evolutionary and expression patterns between lineage specific new duplicate genes and their parental paralogs in Arabidopsis thaliana.

Authors:  Jun Wang; Nicholas C Marowsky; Chuanzhu Fan
Journal:  PLoS One       Date:  2013-08-29       Impact factor: 3.240

8.  Divergence of gene body DNA methylation and evolution of plant duplicate genes.

Authors:  Jun Wang; Nicholas C Marowsky; Chuanzhu Fan
Journal:  PLoS One       Date:  2014-10-13       Impact factor: 3.240

9.  The Evolution of Olfactory Gene Families in Drosophila and the Genomic Basis of chemical-Ecological Adaptation in Drosophila suzukii.

Authors:  Sukanya Ramasamy; Lino Ometto; Cristina M Crava; Santosh Revadi; Rupinder Kaur; David S Horner; Davide Pisani; Teun Dekker; Gianfranco Anfora; Omar Rota-Stabelli
Journal:  Genome Biol Evol       Date:  2016-08-16       Impact factor: 3.416

10.  Identification and Expression Analysis of Candidate Odorant-Binding Protein and Chemosensory Protein Genes by Antennal Transcriptome of Sitobion avenae.

Authors:  Wenxin Xue; Jia Fan; Yong Zhang; Qingxuan Xu; Zongli Han; Jingrui Sun; Julian Chen
Journal:  PLoS One       Date:  2016-08-25       Impact factor: 3.240

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