Literature DB >> 22237257

Detection of adverse drug reaction signals using an electronic health records database: Comparison of the Laboratory Extreme Abnormality Ratio (CLEAR) algorithm.

D Yoon1, M Y Park, N K Choi, B J Park, J H Kim, R W Park.   

Abstract

Electronic health records (EHRs) are expected to be a good source of data for pharmacovigilance. However, current quantitative methods are not applicable to EHR data. We propose a novel quantitative postmarketing surveillance algorithm, the Comparison of Laboratory Extreme Abnormality Ratio (CLEAR), for detecting adverse drug reaction (ADR) signals from EHR data. The methodology involves calculating the odds ratio of laboratory abnormalities between a specific drug-exposed group and a matched unexposed group. Using a 10-year EHR data set, we applied the algorithm to test 470 randomly selected drug-event pairs. It was found possible to analyze a single drug-event pair in just 109 ± 159 seconds. In total, 120 of the 150 detected signals corresponded with previously reported ADRs (positive predictive value (PPV) = 0.837 ± 0.113, negative predictive value (NPV) = 0.659 ± 0.180). By quickly and efficiently identifying ADR signals from EHR data, the CLEAR algorithm can significantly contribute to the utilization of EHR data for pharmacovigilance.

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Year:  2012        PMID: 22237257     DOI: 10.1038/clpt.2011.248

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  19 in total

Review 1.  Clinical Data Reuse or Secondary Use: Current Status and Potential Future Progress.

Authors:  S M Meystre; C Lovis; T Bürkle; G Tognola; A Budrionis; C U Lehmann
Journal:  Yearb Med Inform       Date:  2017-09-11

2.  Development of a Controlled Vocabulary-Based Adverse Drug Reaction Signal Dictionary for Multicenter Electronic Health Record-Based Pharmacovigilance.

Authors:  Suehyun Lee; Jongsoo Han; Rae Woong Park; Grace Juyun Kim; John Hoon Rim; Jooyoung Cho; Kye Hwa Lee; Jisan Lee; Sujeong Kim; Ju Han Kim
Journal:  Drug Saf       Date:  2019-05       Impact factor: 5.606

3.  Comparative analysis of pharmacovigilance methods in the detection of adverse drug reactions using electronic medical records.

Authors:  Mei Liu; Eugenia Renne McPeek Hinz; Michael Edwin Matheny; Joshua C Denny; Jonathan Scott Schildcrout; Randolph A Miller; Hua Xu
Journal:  J Am Med Inform Assoc       Date:  2012-11-17       Impact factor: 4.497

Review 4.  "Big data" and the electronic health record.

Authors:  M K Ross; W Wei; L Ohno-Machado
Journal:  Yearb Med Inform       Date:  2014-08-15

5.  Strategies for handling missing clinical data for automated surgical site infection detection from the electronic health record.

Authors:  Zhen Hu; Genevieve B Melton; Elliot G Arsoniadis; Yan Wang; Mary R Kwaan; Gyorgy J Simon
Journal:  J Biomed Inform       Date:  2017-03-16       Impact factor: 6.317

6.  A Data-Driven Reference Standard for Adverse Drug Reaction (RS-ADR) Signal Assessment: Development and Validation.

Authors:  Suehyun Lee; Jeong Hoon Lee; Grace Juyun Kim; Jong-Yeup Kim; Hyunah Shin; Inseok Ko; Seon Choe; Ju Han Kim
Journal:  J Med Internet Res       Date:  2022-10-06       Impact factor: 7.076

7.  Design patterns for the development of electronic health record-driven phenotype extraction algorithms.

Authors:  Luke V Rasmussen; Will K Thompson; Jennifer A Pacheco; Abel N Kho; David S Carrell; Jyotishman Pathak; Peggy L Peissig; Gerard Tromp; Joshua C Denny; Justin B Starren
Journal:  J Biomed Inform       Date:  2014-06-21       Impact factor: 6.317

8.  Adverse drug events with hyperkalaemia during inpatient stays: evaluation of an automated method for retrospective detection in hospital databases.

Authors:  Grégoire Ficheur; Emmanuel Chazard; Jean-Baptiste Beuscart; Béatrice Merlin; Michel Luyckx; Régis Beuscart
Journal:  BMC Med Inform Decis Mak       Date:  2014-09-12       Impact factor: 2.796

9.  Detection of unknown ototoxic adverse drug reactions: an electronic healthcare record-based longitudinal nationwide cohort analysis.

Authors:  Suehyun Lee; Jaehun Cha; Jong-Yeup Kim; Gil Myeong Son; Dong-Kyu Kim
Journal:  Sci Rep       Date:  2021-07-07       Impact factor: 4.379

10.  A quantitative method for assessment of prescribing patterns using electronic health records.

Authors:  Dukyong Yoon; Inwhee Park; Martijn J Schuemie; Man Young Park; Ju Han Kim; Rae Woong Park
Journal:  PLoS One       Date:  2013-10-10       Impact factor: 3.240

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