Literature DB >> 22231402

Chromodomains read the arginine code of post-translational targeting.

Iris Holdermann1, N Helge Meyer, Adam Round, Klemens Wild, Michael Sattler, Irmgard Sinning.   

Abstract

Chromodomains typically recruit protein complexes to chromatin and read the epigenetic histone code by recognizing lysine methylation in histone tails. We report the crystal structure of the chloroplast signal recognition particle (cpSRP) core from Arabidopsis thaliana, with the cpSRP54 tail comprising an arginine-rich motif bound to the second chromodomain of cpSRP43. A twinned aromatic cage reads out two neighboring nonmethylated arginines and adapts chromodomains to a non-nuclear function in post-translational targeting.

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Year:  2012        PMID: 22231402     DOI: 10.1038/nsmb.2196

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  20 in total

Review 1.  Component interactions, regulation and mechanisms of chloroplast signal recognition particle-dependent protein transport.

Authors:  Christine V Richter; Thomas Bals; Danja Schünemann
Journal:  Eur J Cell Biol       Date:  2010-08-14       Impact factor: 4.492

2.  A unique sequence motif in the 54-kDa subunit of the chloroplast signal recognition particle mediates binding to the 43-kDa subunit.

Authors:  Silke Funke; Thomas Knechten; Julian Ollesch; Danja Schünemann
Journal:  J Biol Chem       Date:  2005-01-04       Impact factor: 5.157

3.  Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43.

Authors:  Katharina F Stengel; Iris Holdermann; Peter Cain; Colin Robinson; Klemens Wild; Irmgard Sinning
Journal:  Science       Date:  2008-07-11       Impact factor: 47.728

Review 4.  Protein targeting by the signal recognition particle.

Authors:  Przemyslaw Grudnik; Gert Bange; Irmgard Sinning
Journal:  Biol Chem       Date:  2009-08       Impact factor: 3.915

5.  A novel signal recognition particle targets light-harvesting proteins to the thylakoid membranes.

Authors:  D Schuenemann; S Gupta; F Persello-Cartieaux; V I Klimyuk; J D Jones; L Nussaume; N E Hoffman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

6.  Structure of eEF3 and the mechanism of transfer RNA release from the E-site.

Authors:  Christian B F Andersen; Thomas Becker; Michael Blau; Monika Anand; Mario Halic; Bharvi Balar; Thorsten Mielke; Thomas Boesen; Jan Skov Pedersen; Christian M T Spahn; Terri Goss Kinzy; Gregers R Andersen; Roland Beckmann
Journal:  Nature       Date:  2006-08-23       Impact factor: 49.962

7.  A chromodomain protein encoded by the arabidopsis CAO gene is a plant-specific component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting.

Authors:  V I Klimyuk; F Persello-Cartieaux; M Havaux; P Contard-David; D Schuenemann; K Meiherhoff; P Gouet; J D Jones; N E Hoffman; L Nussaume
Journal:  Plant Cell       Date:  1999-01       Impact factor: 11.277

8.  The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila.

Authors:  R Paro; D S Hogness
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-01       Impact factor: 11.205

9.  Recognition of trimethyllysine by a chromodomain is not driven by the hydrophobic effect.

Authors:  Robert M Hughes; Kimberly R Wiggins; Sepideh Khorasanizadeh; Marcey L Waters
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-20       Impact factor: 11.205

10.  cpSRP43 is a novel chaperone specific for light-harvesting chlorophyll a,b-binding proteins.

Authors:  Sebastian Falk; Irmgard Sinning
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

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  20 in total

1.  Chloroplast SRP54 Was Recruited for Posttranslational Protein Transport via Complex Formation with Chloroplast SRP43 during Land Plant Evolution.

Authors:  Beatrix Dünschede; Chantal Träger; Christine Vera Schröder; Dominik Ziehe; Björn Walter; Silke Funke; Eckhard Hofmann; Danja Schünemann
Journal:  J Biol Chem       Date:  2015-04-01       Impact factor: 5.157

2.  Regulation of Structural Dynamics within a Signal Recognition Particle Promotes Binding of Protein Targeting Substrates.

Authors:  Feng Gao; Alicia D Kight; Rory Henderson; Srinivas Jayanthi; Parth Patel; Marissa Murchison; Priyanka Sharma; Robyn L Goforth; Thallapuranam Krishnaswamy Suresh Kumar; Ralph L Henry; Colin D Heyes
Journal:  J Biol Chem       Date:  2015-04-27       Impact factor: 5.157

3.  Ribosome-Associated Chloroplast SRP54 Enables Efficient Cotranslational Membrane Insertion of Key Photosynthetic Proteins.

Authors:  Athina Hristou; Ines Gerlach; Dominique S Stolle; Jennifer Neumann; Annika Bischoff; Beatrix Dünschede; Marc M Nowaczyk; Reimo Zoschke; Danja Schünemann
Journal:  Plant Cell       Date:  2019-08-23       Impact factor: 11.277

4.  FRETting about the affinity of bimolecular protein-protein interactions.

Authors:  Tao Lin; Brandon L Scott; Adam D Hoppe; Suvobrata Chakravarty
Journal:  Protein Sci       Date:  2018-10       Impact factor: 6.725

5.  Evolution from the prokaryotic to the higher plant chloroplast signal recognition particle: the signal recognition particle RNA is conserved in plastids of a wide range of photosynthetic organisms.

Authors:  Chantal Träger; Magnus Alm Rosenblad; Dominik Ziehe; Christel Garcia-Petit; Lukas Schrader; Klaus Kock; Christine Vera Richter; Birgit Klinkert; Franz Narberhaus; Christian Herrmann; Eckhard Hofmann; Henrik Aronsson; Danja Schünemann
Journal:  Plant Cell       Date:  2012-12-28       Impact factor: 11.277

6.  Conformational dynamics of a membrane protein chaperone enables spatially regulated substrate capture and release.

Authors:  Fu-Cheng Liang; Gerard Kroon; Camille Z McAvoy; Chris Chi; Peter E Wright; Shu-Ou Shan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

Review 7.  A Structural Perspective on Readout of Epigenetic Histone and DNA Methylation Marks.

Authors:  Dinshaw J Patel
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-03-01       Impact factor: 10.005

8.  Domain Organization in the 54-kDa Subunit of the Chloroplast Signal Recognition Particle.

Authors:  Rory C Henderson; Feng Gao; Srinivas Jayanthi; Alicia Kight; Priyanka Sharma; Robyn L Goforth; Colin D Heyes; Ralph L Henry; Thallapuranam Krishnaswamy Suresh Kumar
Journal:  Biophys J       Date:  2016-09-20       Impact factor: 4.033

9.  Structural basis for arginine methylation-independent recognition of PIWIL1 by TDRD2.

Authors:  Heng Zhang; Ke Liu; Natsuko Izumi; Haiming Huang; Deqiang Ding; Zuyao Ni; Sachdev S Sidhu; Chen Chen; Yukihide Tomari; Jinrong Min
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-08       Impact factor: 11.205

10.  Chloroplast SRP43 acts as a chaperone for glutamyl-tRNA reductase, the rate-limiting enzyme in tetrapyrrole biosynthesis.

Authors:  Peng Wang; Fu-Cheng Liang; Daniel Wittmann; Alex Siegel; Shu-Ou Shan; Bernhard Grimm
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-26       Impact factor: 11.205

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