Literature DB >> 22227886

Support vector machine classification and characterization of age-related reorganization of functional brain networks.

Timothy B Meier1, Alok S Desphande, Svyatoslav Vergun, Veena A Nair, Jie Song, Bharat B Biswal, Mary E Meyerand, Rasmus M Birn, Vivek Prabhakaran.   

Abstract

Most of what is known about the reorganization of functional brain networks that accompanies normal aging is based on neuroimaging studies in which participants perform specific tasks. In these studies, reorganization is defined by the differences in task activation between young and old adults. However, task activation differences could be the result of differences in task performance, strategy, or motivation, and not necessarily reflect reorganization. Resting-state fMRI provides a method of investigating functional brain networks without such confounds. Here, a support vector machine (SVM) classifier was used in an attempt to differentiate older adults from younger adults based on their resting-state functional connectivity. In addition, the information used by the SVM was investigated to see what functional connections best differentiated younger adult brains from older adult brains. Three separate resting-state scans from 26 younger adults (18-35 yrs) and 26 older adults (55-85) were obtained from the International Consortium for Brain Mapping (ICBM) dataset made publically available in the 1000 Functional Connectomes project www.nitrc.org/projects/fcon_1000. 100 seed-regions from four functional networks with 5mm(3) radius were defined based on a recent study using machine learning classifiers on adolescent brains. Time-series for every seed-region were averaged and three matrices of z-transformed correlation coefficients were created for each subject corresponding to each individual's three resting-state scans. SVM was then applied using leave-one-out cross-validation. The SVM classifier was 84% accurate in classifying older and younger adult brains. The majority of the connections used by the classifier to distinguish subjects by age came from seed-regions belonging to the sensorimotor and cingulo-opercular networks. These results suggest that age-related decreases in positive correlations within the cingulo-opercular and default networks, and decreases in negative correlations between the default and sensorimotor networks, are the distinguishing characteristics of age-related reorganization.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22227886      PMCID: PMC3288439          DOI: 10.1016/j.neuroimage.2011.12.052

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  46 in total

1.  Age-related changes of the functional architecture of the cortico-basal ganglia circuitry during motor task execution.

Authors:  William R Marchand; James N Lee; Yana Suchy; Cheryl Garn; Susanna Johnson; Nicole Wood; Gordon Chelune
Journal:  Neuroimage       Date:  2010-12-16       Impact factor: 6.556

Review 2.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

3.  Age differences in deactivation: a link to cognitive control?

Authors:  Jonas Persson; Cindy Lustig; James K Nelson; Patricia A Reuter-Lorenz
Journal:  J Cogn Neurosci       Date:  2007-06       Impact factor: 3.225

4.  Aging influence on functional connectivity of the motor network in the resting state.

Authors:  Tao Wu; Yufeng Zang; Liang Wang; Xiangyu Long; Mark Hallett; Yi Chen; Kuncheng Li; Piu Chan
Journal:  Neurosci Lett       Date:  2007-06-15       Impact factor: 3.046

5.  Normal aging decreases regional homogeneity of the motor areas in the resting state.

Authors:  Tao Wu; Yufeng Zang; Liang Wang; Xiangyu Long; Kuncheng Li; Piu Chan
Journal:  Neurosci Lett       Date:  2007-08-08       Impact factor: 3.046

6.  Bayesian analysis of neuroimaging data in FSL.

Authors:  Mark W Woolrich; Saad Jbabdi; Brian Patenaude; Michael Chappell; Salima Makni; Timothy Behrens; Christian Beckmann; Mark Jenkinson; Stephen M Smith
Journal:  Neuroimage       Date:  2008-11-13       Impact factor: 6.556

7.  A multivariate analysis of age-related differences in default mode and task-positive networks across multiple cognitive domains.

Authors:  Cheryl L Grady; Andrea B Protzner; Natasa Kovacevic; Stephen C Strother; Babak Afshin-Pour; Magda Wojtowicz; John A E Anderson; Nathan Churchill; Anthony R McIntosh
Journal:  Cereb Cortex       Date:  2009-09-29       Impact factor: 5.357

8.  Toward discovery science of human brain function.

Authors:  Bharat B Biswal; Maarten Mennes; Xi-Nian Zuo; Suril Gohel; Clare Kelly; Steve M Smith; Christian F Beckmann; Jonathan S Adelstein; Randy L Buckner; Stan Colcombe; Anne-Marie Dogonowski; Monique Ernst; Damien Fair; Michelle Hampson; Matthew J Hoptman; James S Hyde; Vesa J Kiviniemi; Rolf Kötter; Shi-Jiang Li; Ching-Po Lin; Mark J Lowe; Clare Mackay; David J Madden; Kristoffer H Madsen; Daniel S Margulies; Helen S Mayberg; Katie McMahon; Christopher S Monk; Stewart H Mostofsky; Bonnie J Nagel; James J Pekar; Scott J Peltier; Steven E Petersen; Valentin Riedl; Serge A R B Rombouts; Bart Rypma; Bradley L Schlaggar; Sein Schmidt; Rachael D Seidler; Greg J Siegle; Christian Sorg; Gao-Jun Teng; Juha Veijola; Arno Villringer; Martin Walter; Lihong Wang; Xu-Chu Weng; Susan Whitfield-Gabrieli; Peter Williamson; Christian Windischberger; Yu-Feng Zang; Hong-Ying Zhang; F Xavier Castellanos; Michael P Milham
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-22       Impact factor: 11.205

9.  Growing together and growing apart: regional and sex differences in the lifespan developmental trajectories of functional homotopy.

Authors:  Xi-Nian Zuo; Clare Kelly; Adriana Di Martino; Maarten Mennes; Daniel S Margulies; Saroja Bangaru; Rebecca Grzadzinski; Alan C Evans; Yu-Feng Zang; F Xavier Castellanos; Michael P Milham
Journal:  J Neurosci       Date:  2010-11-10       Impact factor: 6.167

10.  Sources of group differences in functional connectivity: an investigation applied to autism spectrum disorder.

Authors:  Tyler B Jones; Peter A Bandettini; Lauren Kenworthy; Laura K Case; Shawn C Milleville; Alex Martin; Rasmus M Birn
Journal:  Neuroimage       Date:  2009-07-29       Impact factor: 6.556

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  68 in total

1.  Nodal centrality of functional network in the differentiation of schizophrenia.

Authors:  Hu Cheng; Sharlene Newman; Joaquín Goñi; Jerillyn S Kent; Josselyn Howell; Amanda Bolbecker; Aina Puce; Brian F O'Donnell; William P Hetrick
Journal:  Schizophr Res       Date:  2015-08-20       Impact factor: 4.939

2.  A multivariate pattern analysis of resting-state functional MRI data in Naïve and chronic betel quid chewers.

Authors:  Zeqiang Linli; Xiaojun Huang; Zhening Liu; Shuixia Guo; Adellah Sariah
Journal:  Brain Imaging Behav       Date:  2021-06       Impact factor: 3.978

3.  The influence of spatial resolution and smoothing on the detectability of resting-state and task fMRI.

Authors:  Erin K Molloy; Mary E Meyerand; Rasmus M Birn
Journal:  Neuroimage       Date:  2013-09-08       Impact factor: 6.556

4.  Using Low-Frequency Oscillations to Detect Temporal Lobe Epilepsy with Machine Learning.

Authors:  Gyujoon Hwang; Veena A Nair; Jed Mathis; Cole J Cook; Rosaleena Mohanty; Gengyan Zhao; Neelima Tellapragada; Candida Ustine; Onyekachi O Nwoke; Charlene Rivera-Bonet; Megan Rozman; Linda Allen; Courtney Forseth; Dace N Almane; Peter Kraegel; Andrew Nencka; Elizabeth Felton; Aaron F Struck; Rasmus Birn; Rama Maganti; Lisa L Conant; Colin J Humphries; Bruce Hermann; Manoj Raghavan; Edgar A DeYoe; Jeffrey R Binder; Elizabeth Meyerand; Vivek Prabhakaran
Journal:  Brain Connect       Date:  2019-03

5.  Disrupted Brain Functional Organization in Epilepsy Revealed by Graph Theory Analysis.

Authors:  Jie Song; Veena A Nair; Wolfgang Gaggl; Vivek Prabhakaran
Journal:  Brain Connect       Date:  2015-03-26

6.  Investigating the effects of subconcussion on functional connectivity using mass-univariate and multivariate approaches.

Authors:  Bryson B Reynolds; Amanda N Stanton; Sauson Soldozy; Howard P Goodkin; Max Wintermark; T Jason Druzgal
Journal:  Brain Imaging Behav       Date:  2018-10       Impact factor: 3.978

Review 7.  Machine learning in resting-state fMRI analysis.

Authors:  Meenakshi Khosla; Keith Jamison; Gia H Ngo; Amy Kuceyeski; Mert R Sabuncu
Journal:  Magn Reson Imaging       Date:  2019-06-05       Impact factor: 2.546

8.  Evaluating the Prediction of Brain Maturity From Functional Connectivity After Motion Artifact Denoising.

Authors:  Ashley N Nielsen; Deanna J Greene; Caterina Gratton; Nico U F Dosenbach; Steven E Petersen; Bradley L Schlaggar
Journal:  Cereb Cortex       Date:  2019-06-01       Impact factor: 5.357

9.  Anatomical distance affects functional connectivity in patients with schizophrenia and their siblings.

Authors:  Shuixia Guo; Lena Palaniyappan; Bo Yang; Zhening Liu; Zhimin Xue; Jianfeng Feng
Journal:  Schizophr Bull       Date:  2013-11-26       Impact factor: 9.306

10.  Functional brain connectivity and cognition: effects of adult age and task demands.

Authors:  Ying-Hui Chou; Nan-Kuei Chen; David J Madden
Journal:  Neurobiol Aging       Date:  2013-03-21       Impact factor: 4.673

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