Literature DB >> 22226956

New betaproteobacterial Rhizobium strains able to efficiently nodulate Parapiptadenia rigida (Benth.) Brenan.

Cecilia Taulé1, María Zabaleta, Cintia Mareque, Raúl Platero, Lucía Sanjurjo, Margarita Sicardi, Lillian Frioni, Federico Battistoni, Elena Fabiano.   

Abstract

Among the leguminous trees native to Uruguay, Parapiptadenia rigida (Angico), a Mimosoideae legume, is one of the most promising species for agroforestry. Like many other legumes, it is able to establish symbiotic associations with rhizobia and belongs to the group known as nitrogen-fixing trees, which are major components of agroforestry systems. Information about rhizobial symbionts for this genus is scarce, and thus, the aim of this work was to identify and characterize rhizobia associated with P. rigida. A collection of Angico-nodulating isolates was obtained, and 47 isolates were selected for genetic studies. According to enterobacterial repetitive intergenic consensus PCR patterns and restriction fragment length polymorphism analysis of their nifH and 16S rRNA genes, the isolates could be grouped into seven genotypes, including the genera Burkholderia, Cupriavidus, and Rhizobium, among which the Burkholderia genotypes were the predominant group. Phylogenetic studies of nifH, nodA, and nodC sequences from the Burkholderia and the Cupriavidus isolates indicated a close relationship of these genes with those from betaproteobacterial rhizobia (beta-rhizobia) rather than from alphaproteobacterial rhizobia (alpha-rhizobia). In addition, nodulation assays with representative isolates showed that while the Cupriavidus isolates were able to effectively nodulate Mimosa pudica, the Burkholderia isolates produced white and ineffective nodules on this host.

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Year:  2012        PMID: 22226956      PMCID: PMC3298154          DOI: 10.1128/AEM.06215-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  31 in total

1.  Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil.

Authors:  Fábio Bueno Dos Reis; Marcelo F Simon; Eduardo Gross; Robert M Boddey; Geoffrey N Elliott; Nicolau E Neto; M de Fatima Loureiro; Luciano P de Queiroz; Maria Rita Scotti; Wen-Ming Chen; Agneta Norén; Maria C Rubio; Sergio M de Faria; Cyril Bontemps; Silvia R Goi; J Peter W Young; Janet I Sprent; Euan K James
Journal:  New Phytol       Date:  2010-04-22       Impact factor: 10.151

Review 2.  The role of phylogenetics in comparative genetics.

Authors:  Douglas E Soltis; Pamela S Soltis
Journal:  Plant Physiol       Date:  2003-08       Impact factor: 8.340

Review 3.  Legume-nodulating betaproteobacteria: diversity, host range, and future prospects.

Authors:  Prasad Gyaneshwar; Ann M Hirsch; Lionel Moulin; Wen-Ming Chen; Geoffrey N Elliott; Cyril Bontemps; Paulina Estrada-de Los Santos; Eduardo Gross; Fabio Bueno Dos Reis; Janet I Sprent; J Peter W Young; Euan K James
Journal:  Mol Plant Microbe Interact       Date:  2011-11       Impact factor: 4.171

4.  Monophyly of nodA and nifH genes across Texan and Costa Rican populations of Cupriavidus nodule symbionts.

Authors:  Cheryl P Andam; Stephen J Mondo; Matthew A Parker
Journal:  Appl Environ Microbiol       Date:  2007-05-25       Impact factor: 4.792

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient.

Authors:  W M Chen; S Laevens; T M Lee; T Coenye; P De Vos; M Mergeay; P Vandamme
Journal:  Int J Syst Evol Microbiol       Date:  2001-09       Impact factor: 2.747

7.  Proof that Burkholderia strains form effective symbioses with legumes: a study of novel Mimosa-nodulating strains from South America.

Authors:  Wen-Ming Chen; Sergio M de Faria; Rosângela Straliotto; Rosa M Pitard; Jean L Simões-Araùjo; Jui-Hsing Chou; Yi-Ju Chou; Edmundo Barrios; Alan R Prescott; Geoffrey N Elliott; Janet I Sprent; J Peter W Young; Euan K James
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

8.  Burkholderia sabiae sp. nov., isolated from root nodules of Mimosa caesalpiniifolia.

Authors:  Wen-Ming Chen; Sergio M de Faria; Jui-Hsing Chou; Euan K James; Geoffrey N Elliott; Janet I Sprent; Cyril Bontemps; J Peter W Young; Peter Vandamme
Journal:  Int J Syst Evol Microbiol       Date:  2008-09       Impact factor: 2.747

9.  Coexistence of Burkholderia, Cupriavidus, and Rhizobium sp. nodule bacteria on two Mimosa spp. in Costa Rica.

Authors:  Craig F Barrett; Matthew A Parker
Journal:  Appl Environ Microbiol       Date:  2006-02       Impact factor: 4.792

10.  NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes.

Authors:  T Z DeSantis; P Hugenholtz; K Keller; E L Brodie; N Larsen; Y M Piceno; R Phan; G L Andersen
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

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  12 in total

Review 1.  Twenty years of paradigm-breaking studies of taxonomy and symbiotic nitrogen fixation by beta-rhizobia, and indication of Brazil as a hotspot of Paraburkholderia diversity.

Authors:  Fabiane Paulitsch; Fabio Bueno Dos Reis; Mariangela Hungria
Journal:  Arch Microbiol       Date:  2021-07-10       Impact factor: 2.552

2.  Paenibacillus sp. Strain UY79, Isolated from a Root Nodule of Arachis villosa, Displays a Broad Spectrum of Antifungal Activity.

Authors:  Andrés Costa; Belén Corallo; Vanesa Amarelle; Silvina Stewart; Dinorah Pan; Susana Tiscornia; Elena Fabiano
Journal:  Appl Environ Microbiol       Date:  2021-11-10       Impact factor: 5.005

3.  Burkholderia sp. induces functional nodules on the South African invasive legume Dipogon lignosus (Phaseoleae) in New Zealand soils.

Authors:  Wendy Y Y Liu; Hayley J Ridgway; Trevor K James; Euan K James; Wen-Ming Chen; Janet I Sprent; J Peter W Young; Mitchell Andrews
Journal:  Microb Ecol       Date:  2014-05-07       Impact factor: 4.552

4.  Novel Cupriavidus Strains Isolated from Root Nodules of Native Uruguayan Mimosa Species.

Authors:  Raúl Platero; Euan K James; Cecilia Rios; Andrés Iriarte; Laura Sandes; María Zabaleta; Federico Battistoni; Elena Fabiano
Journal:  Appl Environ Microbiol       Date:  2016-05-16       Impact factor: 4.792

5.  High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Burkholderia sp. strain UYPR1.413.

Authors:  Sofie E De Meyer; Elena Fabiano; Rui Tian; Peter Van Berkum; Rekha Seshadri; Tbk Reddy; Victor Markowitz; Natalia Ivanova; Amrita Pati; Tanja Woyke; John Howieson; Nikos Kyrpides; Wayne Reeve
Journal:  Stand Genomic Sci       Date:  2015-06-04

6.  High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512.

Authors:  Sofie E De Meyer; Elena Fabiano; Rui Tian; Peter Van Berkum; Rekha Seshadri; Tbk Reddy; Victor Markowitz; Natalia N Ivanova; Amrita Pati; Tanja Woyke; John Howieson; Nikos C Kyrpides; Wayne Reeve
Journal:  Stand Genomic Sci       Date:  2015-04-11

7.  High-quality permanent draft genome sequence of the Mimosa asperata - nodulating Cupriavidus sp. strain AMP6.

Authors:  Sofie E De Meyer; Matthew Parker; Peter Van Berkum; Rui Tian; Rekha Seshadri; T B K Reddy; Victor Markowitz; Natalia Ivanova; Amrita Pati; Tanja Woyke; Nikos Kyrpides; John Howieson; Wayne Reeve
Journal:  Stand Genomic Sci       Date:  2015-10-16

8.  Burkholderia species are the most common and preferred nodulating symbionts of the Piptadenia group (tribe Mimoseae).

Authors:  Caroline Bournaud; Sergio Miana de Faria; José Miguel Ferreira dos Santos; Pierre Tisseyre; Michele Silva; Clémence Chaintreuil; Eduardo Gross; Euan K James; Yves Prin; Lionel Moulin
Journal:  PLoS One       Date:  2013-05-15       Impact factor: 3.240

9.  Genomic basis of symbiovar mimosae in Rhizobium etli.

Authors:  Marco A Rogel; Patricia Bustos; Rosa I Santamaría; Víctor González; David Romero; Miguel Ángel Cevallos; Luis Lozano; Jaime Castro-Mondragón; Julio Martínez-Romero; Ernesto Ormeño-Orrillo; Esperanza Martínez-Romero
Journal:  BMC Genomics       Date:  2014-07-08       Impact factor: 3.969

10.  Transcriptomic profiling of Burkholderia phymatum STM815, Cupriavidus taiwanensis LMG19424 and Rhizobium mesoamericanum STM3625 in response to Mimosa pudica root exudates illuminates the molecular basis of their nodulation competitiveness and symbiotic evolutionary history.

Authors:  Agnieszka Klonowska; Rémy Melkonian; Lucie Miché; Pierre Tisseyre; Lionel Moulin
Journal:  BMC Genomics       Date:  2018-01-30       Impact factor: 3.969

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