Literature DB >> 22225395

Logical stochastic resonance with correlated internal and external noises in a synthetic biological logic block.

Anna Dari1, Behnam Kia, Adi R Bulsara, William L Ditto.   

Abstract

Following the advent of synthetic biology, several gene networks have been engineered to emulate digital devices, with the ability to program cells for different applications. In this work, we adapt the concept of logical stochastic resonance to a synthetic gene network derived from a bacteriophage λ. The intriguing results of this study show that it is possible to build a biological logic block that can emulate or switch from the AND to the OR gate functionalities through externally tuning the system parameters. Moreover, this behavior and the robustness of the logic gate are underpinned by the presence of an optimal amount of random fluctuations. We extend our earlier work in this field, by taking into account the effects of correlated external (additive) and internal (multiplicative or state-dependent) noise. Results obtained through analytical calculations as well as numerical simulations are presented.

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Year:  2011        PMID: 22225395     DOI: 10.1063/1.3660159

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  5 in total

1.  Time-delay-induced dynamical behaviors for an ecological vegetation growth system driven by cross-correlated multiplicative and additive noises.

Authors:  Kang-Kang Wang; Hui Ye; Ya-Jun Wang; Sheng-Hong Li
Journal:  Eur Phys J E Soft Matter       Date:  2018-05-14       Impact factor: 1.890

2.  Emotion: The Self-regulatory Sense.

Authors:  Katherine T Peil
Journal:  Glob Adv Health Med       Date:  2014-03

3.  SynBioLGDB: a resource for experimentally validated logic gates in synthetic biology.

Authors:  Liqiang Wang; Kun Qian; Yan Huang; Nana Jin; Hongyan Lai; Ting Zhang; Chunhua Li; Chunrui Zhang; Xiaoman Bi; Deng Wu; Changliang Wang; Hao Wu; Puwen Tan; Jianping Lu; Liqun Chen; Kongning Li; Xia Li; Dong Wang
Journal:  Sci Rep       Date:  2015-01-28       Impact factor: 4.379

4.  Chaotic attractor hopping yields logic operations.

Authors:  K Murali; Sudeshna Sinha; Vivek Kohar; Behnam Kia; William L Ditto
Journal:  PLoS One       Date:  2018-12-21       Impact factor: 3.240

5.  Physical Limitations on Fundamental Efficiency of SET-Based Brownian Circuits.

Authors:  İlke Ercan; Zeynep Duygu Sütgöl; Faik Ozan Özhan
Journal:  Entropy (Basel)       Date:  2021-03-30       Impact factor: 2.524

  5 in total

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