Literature DB >> 2222417

Use of ATP, dATP and their alpha-thio derivatives to study DNA ligase adenylation.

A Montecucco1, M Lestingi, G Pedrali-Noy, S Spadari, G Ciarrocchi.   

Abstract

Bacteriophage-T4 and human type I DNA ligases were found capable of self-adenylating upon exposure to both ribo- and deoxyribo-[alpha-35S]thio-ATP. However, the joining reaction does not take place in the presence of the deoxyribotriphosphates. Enzyme adenylation is reversed in all cases by an excess of PPi, but the rate of reversion is lower with thio derivatives. Therefore thio derivatives can be used to study the adenylation of DNA ligases and to search for specific inhibitors of the first step of the ligation reaction. In addition we show that thio derivatives can be used to detect DNA ligase adenylation activity covalently bound to a solid matrix.

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Year:  1990        PMID: 2222417      PMCID: PMC1149543          DOI: 10.1042/bj2710265

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  12 in total

1.  DNA ligases are specifically inhibited by anthracyclines with a free 3'-amino group.

Authors:  A Montecucco; G Pedrali-Noy; S Spadari; E Zanolin; M T Chiesa; G Ciarrocchi
Journal:  J Chemother       Date:  1989-07       Impact factor: 1.714

2.  Synthesis and properties of diastereoisomers of adenosine 5'-(O-1-thiotriphosphate) and adenosine 5'-(O-2-thiotriphosphate).

Authors:  F Eckstein; R S Goody
Journal:  Biochemistry       Date:  1976-04-20       Impact factor: 3.162

Review 3.  DNA ligase: structure, mechanism, and function.

Authors:  I R Lehman
Journal:  Science       Date:  1974-11-29       Impact factor: 47.728

4.  Enzymatic breakage and joining of deoxyribonucleic acid. IX. Synthesis and properties of the deoxyribonucleic acid adenylate in the phage T4 ligase reaction.

Authors:  C L Harvey; T F Gabriel; E M Wilt; C C Richardson
Journal:  J Biol Chem       Date:  1971-07-25       Impact factor: 5.157

5.  Purification and properties of a polynucleotide ligase from human cell cultures.

Authors:  S Spadari; G Ciarrocchi; A Falaschi
Journal:  Eur J Biochem       Date:  1971-09-13

6.  AMP-dependent DNA relaxation catalyzed by DNA ligase occurs by a nicking-closing mechanism.

Authors:  A Montecucco; G Ciarrocchi
Journal:  Nucleic Acids Res       Date:  1988-08-11       Impact factor: 16.971

7.  Multiple roles of DNA ligase at the replication fork.

Authors:  A Montecucco; G Pedrali-Noy; S Spadari; G Ciarrocchi
Journal:  Biochim Biophys Acta       Date:  1988-12-20

8.  DNA-drug interactions. The crystal structure of d(CGATCG) complexed with daunomycin.

Authors:  M H Moore; W N Hunter; B L d'Estaintot; O Kennard
Journal:  J Mol Biol       Date:  1989-04-20       Impact factor: 5.469

9.  DNA unwinding and inhibition of T4 DNA ligase by anthracyclines.

Authors:  A Montecucco; G Pedrali-Noy; S Spadari; E Zanolin; G Ciarrocchi
Journal:  Nucleic Acids Res       Date:  1988-05-11       Impact factor: 16.971

10.  Enzymatic joining of polynucleotides. IX. A simple and rapid assay of polynucleotide joining (ligase) activity by measurement of circle formation from linear deoxyadenylate-deoxythymidylate copolymer.

Authors:  P Modrich; I R Lehman
Journal:  J Biol Chem       Date:  1970-07-25       Impact factor: 5.157

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  14 in total

1.  Binding of nucleotides by T4 DNA ligase and T4 RNA ligase: optical absorbance and fluorescence studies.

Authors:  A V Cherepanov; S de Vries
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Correlation between anthracycline structure and human DNA ligase inhibition.

Authors:  G Ciarrocchi; M Lestingi; M Fontana; S Spadari; A Montecucco
Journal:  Biochem J       Date:  1991-10-01       Impact factor: 3.857

3.  L-ATP is recognized by some cellular and viral enzymes: does chance drive enzymic enantioselectivity?

Authors:  A Verri; A Montecucco; G Gosselin; V Boudou; J L Imbach; S Spadari; F Focher
Journal:  Biochem J       Date:  1999-02-01       Impact factor: 3.857

4.  Characterization of an ATP-dependent DNA ligase encoded by Chlorella virus PBCV-1.

Authors:  C K Ho; J L Van Etten; S Shuman
Journal:  J Virol       Date:  1997-03       Impact factor: 5.103

5.  Uracil-DNA glycosylase of Thermoplasma acidophilum directs long-patch base excision repair, which is promoted by deoxynucleoside triphosphates and ATP/ADP, into short-patch repair.

Authors:  Marivi N Moen; Ingeborg Knævelsrud; Gyri T Haugland; Kristin Grøsvik; Nils-Kåre Birkeland; Arne Klungland; Svein Bjelland
Journal:  J Bacteriol       Date:  2011-06-10       Impact factor: 3.490

6.  Backbone and benzoyl mustard carrying moiety modifies DNA interactions of distamycin analogues.

Authors:  A Ciucci; S Manzini; P Lombardi; F Arcamone
Journal:  Nucleic Acids Res       Date:  1996-01-15       Impact factor: 16.971

7.  Characterization of human DNA ligase I expressed in a baculovirus-insect cell system.

Authors:  A Gallina; F Rossi; G Milanesi; R Rossi; A Montecucco; G Ciarrocchi
Journal:  Biochem J       Date:  1995-12-01       Impact factor: 3.857

8.  Bacteriophage T4 and human type I DNA ligases relax DNA under joining conditions.

Authors:  G Ciarrocchi; M Lestingi; G Wright; A Montecucco
Journal:  Nucleic Acids Res       Date:  1993-12-25       Impact factor: 16.971

9.  DNA ligase I gene expression during differentiation and cell proliferation.

Authors:  A Montecucco; G Biamonti; E Savini; F Focher; S Spadari; G Ciarrocchi
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

10.  Profiling the selectivity of DNA ligases in an array format with mass spectrometry.

Authors:  Joohoon Kim; Milan Mrksich
Journal:  Nucleic Acids Res       Date:  2009-10-23       Impact factor: 16.971

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