Literature DB >> 22222612

Dynamical probing of allosteric control in nuclear receptors.

Mark A Cunningham1.   

Abstract

The dynamical behavior of the nuclear receptor LXR/RXR heterodimer was investigated with molecular dynamics simulations. The simulations reveal correlated motion between residues across the dimer interface that depends significantly on occupation of the ligand binding sites of the monomers. These results are broadly consistent with the observed experimental behavior of the dimers, where structural perturbation is thought to be a key element in signal transduction. Our results provide dynamical support for this model of allosteric control.

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Year:  2012        PMID: 22222612     DOI: 10.1007/s00894-011-1330-y

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  12 in total

1.  Allosteric control of ligand selectivity between estrogen receptors alpha and beta: implications for other nuclear receptors.

Authors:  Kendall W Nettles; Jun Sun; James T Radek; Shubin Sheng; Alice L Rodriguez; John A Katzenellenbogen; Benita S Katzenellenbogen; Geoffrey L Greene
Journal:  Mol Cell       Date:  2004-02-13       Impact factor: 17.970

Review 2.  Ligand control of coregulator recruitment to nuclear receptors.

Authors:  Kendall W Nettles; Geoffrey L Greene
Journal:  Annu Rev Physiol       Date:  2005       Impact factor: 19.318

Review 3.  Nuclear receptors: one big family.

Authors:  Iain J McEwan
Journal:  Methods Mol Biol       Date:  2009

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Journal:  Phys Rev A Gen Phys       Date:  1986-09

5.  Canonical dynamics: Equilibrium phase-space distributions.

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Journal:  Phys Rev A Gen Phys       Date:  1985-03

6.  VMD: visual molecular dynamics.

Authors:  W Humphrey; A Dalke; K Schulten
Journal:  J Mol Graph       Date:  1996-02

7.  Ligand-binding regulation of LXR/RXR and LXR/PPAR heterodimerizations: SPR technology-based kinetic analysis correlated with molecular dynamics simulation.

Authors:  Liduo Yue; Fei Ye; Chunshan Gui; Haibin Luo; Jianhua Cai; Jianhua Shen; Kaixian Chen; Xu Shen; Hualiang Jiang
Journal:  Protein Sci       Date:  2005-03       Impact factor: 6.725

8.  Regulation of absorption and ABC1-mediated efflux of cholesterol by RXR heterodimers.

Authors:  J J Repa; S D Turley; J A Lobaccaro; J Medina; L Li; K Lustig; B Shan; R A Heyman; J M Dietschy; D J Mangelsdorf
Journal:  Science       Date:  2000-09-01       Impact factor: 47.728

Review 9.  The nuclear receptor superfamily: the second decade.

Authors:  D J Mangelsdorf; C Thummel; M Beato; P Herrlich; G Schütz; K Umesono; B Blumberg; P Kastner; M Mark; P Chambon; R M Evans
Journal:  Cell       Date:  1995-12-15       Impact factor: 41.582

10.  LXR regulates cholesterol uptake through Idol-dependent ubiquitination of the LDL receptor.

Authors:  Noam Zelcer; Cynthia Hong; Rima Boyadjian; Peter Tontonoz
Journal:  Science       Date:  2009-06-11       Impact factor: 47.728

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  2 in total

1.  Immobilization of the N-terminal helix stabilizes prefusion paramyxovirus fusion proteins.

Authors:  Albert S Song; Taylor A Poor; Luciano A Abriata; Theodore S Jardetzky; Matteo Dal Peraro; Robert A Lamb
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-22       Impact factor: 11.205

2.  Structural and Functional Analysis of Gly212 Mutants Reveals the Importance of Intersubunit Interactions in ASIC1a Channel Function.

Authors:  Olivier Bignucolo; Sabrina Vullo; Nicolas Ambrosio; Ivan Gautschi; Stephan Kellenberger
Journal:  Front Mol Biosci       Date:  2020-04-28
  2 in total

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