Literature DB >> 22220126

4'-(4-Bromo-phen-yl)-1'-methyl-dispiro-[indan-2,2'-pyrrolidine-3',2''-indan]-1,3,1''-trione.

Ang Chee Wei, Mohamed Ashraf Ali, Rusli Ismail, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

In the title compound, C(27)H(20)BrNO(3), the pyrrolidine ring adopts a half-chair conformation, while the other five-membered rings adopt flattened envelope conformations with the spiro C atoms as the flap atoms. An intra-molecular C-H⋯O hydrogen bond occurs, generating an S(6) ring. In the crystal, mol-ecules are connected via weak C-H⋯O hydrogen bonds, forming chains along the c axis.

Entities:  

Year:  2011        PMID: 22220126      PMCID: PMC3247508          DOI: 10.1107/S1600536811044515

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to tuberculosis, see: Sunduru et al. (2010 ▶); Trivedi et al. (2010 ▶). For background to anti-tuberculous drugs, see: Moraski et al. (2011 ▶); Kumar et al. (2009 ▶); Maheswari et al. (2010 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C27H20BrNO3 M = 486.35 Monoclinic, a = 7.8392 (1) Å b = 21.5849 (5) Å c = 12.7823 (3) Å β = 98.422 (1)° V = 2139.55 (8) Å3 Z = 4 Mo Kα radiation μ = 1.95 mm−1 T = 100 K 0.42 × 0.20 × 0.13 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.492, T max = 0.788 18795 measured reflections 6300 independent reflections 4709 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.094 S = 1.02 6300 reflections 290 parameters H-atom parameters constrained Δρmax = 0.78 e Å−3 Δρmin = −0.72 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811044515/hb6460sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811044515/hb6460Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H20BrNO3F(000) = 992
Mr = 486.35Dx = 1.510 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5478 reflections
a = 7.8392 (1) Åθ = 2.5–29.8°
b = 21.5849 (5) ŵ = 1.95 mm1
c = 12.7823 (3) ÅT = 100 K
β = 98.422 (1)°Block, yellow
V = 2139.55 (8) Å30.42 × 0.20 × 0.13 mm
Z = 4
Bruker SMART APEXII CCD diffractometer6300 independent reflections
Radiation source: fine-focus sealed tube4709 reflections with I > 2σ(I)
graphiteRint = 0.036
φ and ω scansθmax = 30.2°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→11
Tmin = 0.492, Tmax = 0.788k = −30→21
18795 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.094H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0387P)2 + 1.0757P] where P = (Fo2 + 2Fc2)/3
6300 reflections(Δ/σ)max < 0.001
290 parametersΔρmax = 0.78 e Å3
0 restraintsΔρmin = −0.72 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.43113 (3)0.100889 (10)0.065729 (18)0.03000 (8)
O1−0.22936 (19)−0.10044 (7)0.55329 (11)0.0260 (3)
O2−0.0213 (2)−0.18954 (7)0.22339 (11)0.0276 (3)
O3−0.4454 (2)−0.15915 (7)0.21003 (11)0.0290 (4)
N1−0.3407 (2)−0.04677 (8)0.34244 (13)0.0215 (4)
C10.2608 (2)0.05064 (9)0.11634 (15)0.0204 (4)
C20.1755 (3)0.07378 (10)0.19495 (16)0.0219 (4)
H2A0.20490.11320.22540.026*
C30.0460 (3)0.03840 (9)0.22887 (15)0.0203 (4)
H3A−0.01390.05420.28260.024*
C40.0021 (2)−0.01977 (9)0.18553 (14)0.0176 (4)
C50.0949 (3)−0.04220 (9)0.10800 (15)0.0203 (4)
H5A0.0685−0.08210.07850.024*
C60.2249 (3)−0.00746 (10)0.07308 (15)0.0222 (4)
H6A0.2876−0.02330.02070.027*
C7−0.1388 (2)−0.05921 (9)0.21992 (15)0.0188 (4)
H7A−0.1739−0.08980.16210.023*
C8−0.3039 (3)−0.02450 (10)0.23916 (16)0.0224 (4)
H8A−0.28460.02080.24080.027*
H8B−0.4008−0.03420.18280.027*
C9−0.2654 (2)−0.10771 (9)0.35915 (15)0.0185 (4)
C10−0.0832 (2)−0.09696 (9)0.32268 (15)0.0170 (4)
C110.0410 (2)−0.06671 (9)0.41356 (15)0.0182 (4)
H11A0.1157−0.03560.38590.022*
H11B−0.0239−0.04640.46500.022*
C120.1463 (2)−0.12043 (9)0.46402 (15)0.0187 (4)
C130.2532 (3)−0.12312 (11)0.56122 (16)0.0259 (5)
H13A0.2694−0.08780.60580.031*
C140.3353 (3)−0.17868 (12)0.59126 (17)0.0320 (5)
H14A0.4071−0.18120.65780.038*
C150.3152 (3)−0.23066 (12)0.52644 (18)0.0316 (5)
H15A0.3717−0.26820.54950.038*
C160.2136 (3)−0.22802 (10)0.42880 (17)0.0259 (4)
H16A0.2018−0.26290.38300.031*
C170.1288 (2)−0.17243 (9)0.39946 (15)0.0192 (4)
C180.0067 (2)−0.15870 (9)0.30345 (15)0.0193 (4)
C19−0.2491 (2)−0.13185 (10)0.47401 (15)0.0203 (4)
C20−0.2659 (2)−0.20008 (10)0.46840 (15)0.0193 (4)
C21−0.2248 (3)−0.24379 (10)0.54822 (16)0.0235 (4)
H21A−0.1788−0.23150.61800.028*
C22−0.2525 (3)−0.30551 (11)0.52318 (17)0.0270 (5)
H22A−0.2236−0.33620.57610.032*
C23−0.3230 (3)−0.32353 (10)0.42047 (18)0.0274 (5)
H23A−0.3429−0.36620.40530.033*
C24−0.3641 (3)−0.28024 (10)0.34061 (17)0.0247 (4)
H24A−0.4117−0.29260.27110.030*
C25−0.3334 (2)−0.21820 (10)0.36564 (15)0.0202 (4)
C26−0.3611 (3)−0.16237 (10)0.29702 (15)0.0214 (4)
C27−0.5213 (3)−0.04025 (11)0.35822 (17)0.0282 (5)
H27A−0.5346−0.05450.42940.042*
H27B−0.5946−0.06520.30560.042*
H27C−0.55560.00340.35030.042*
U11U22U33U12U13U23
Br10.02737 (12)0.02655 (12)0.03979 (13)0.00148 (9)0.01733 (9)0.00830 (10)
O10.0272 (8)0.0313 (8)0.0191 (7)−0.0046 (7)0.0025 (6)−0.0031 (6)
O20.0340 (9)0.0244 (8)0.0241 (7)−0.0011 (7)0.0026 (6)−0.0056 (6)
O30.0289 (8)0.0354 (9)0.0200 (7)−0.0075 (7)−0.0057 (6)0.0027 (6)
N10.0155 (8)0.0263 (9)0.0232 (8)0.0029 (7)0.0047 (7)0.0042 (7)
C10.0166 (9)0.0225 (10)0.0228 (10)0.0027 (8)0.0052 (7)0.0073 (8)
C20.0239 (10)0.0184 (10)0.0240 (10)0.0013 (8)0.0056 (8)0.0018 (8)
C30.0213 (10)0.0209 (10)0.0203 (9)0.0041 (8)0.0079 (8)0.0013 (8)
C40.0163 (9)0.0194 (9)0.0164 (8)0.0026 (7)0.0001 (7)0.0046 (7)
C50.0214 (10)0.0198 (10)0.0192 (9)0.0039 (8)0.0012 (8)0.0005 (8)
C60.0223 (10)0.0253 (10)0.0199 (9)0.0067 (8)0.0061 (8)0.0020 (8)
C70.0169 (9)0.0202 (10)0.0187 (9)0.0002 (8)0.0009 (7)0.0021 (7)
C80.0166 (10)0.0268 (11)0.0236 (10)0.0014 (8)0.0021 (8)0.0071 (8)
C90.0180 (9)0.0207 (10)0.0163 (9)−0.0016 (8)0.0009 (7)0.0013 (7)
C100.0150 (9)0.0180 (9)0.0177 (8)−0.0012 (7)0.0011 (7)0.0015 (7)
C110.0164 (9)0.0186 (10)0.0191 (9)−0.0025 (7)0.0010 (7)−0.0015 (7)
C120.0140 (9)0.0244 (10)0.0178 (9)−0.0021 (8)0.0024 (7)0.0024 (8)
C130.0187 (10)0.0400 (13)0.0190 (10)−0.0028 (9)0.0027 (8)−0.0010 (9)
C140.0204 (11)0.0530 (16)0.0223 (11)0.0053 (10)0.0017 (8)0.0125 (10)
C150.0246 (11)0.0371 (13)0.0341 (12)0.0091 (10)0.0077 (9)0.0167 (10)
C160.0248 (11)0.0234 (11)0.0313 (11)0.0036 (9)0.0095 (9)0.0064 (9)
C170.0150 (9)0.0223 (10)0.0209 (9)−0.0006 (8)0.0048 (7)0.0044 (8)
C180.0182 (9)0.0185 (9)0.0215 (9)−0.0037 (8)0.0039 (8)0.0010 (8)
C190.0142 (9)0.0274 (11)0.0191 (9)−0.0038 (8)0.0022 (7)0.0016 (8)
C200.0128 (9)0.0251 (10)0.0197 (9)−0.0036 (8)0.0011 (7)0.0011 (8)
C210.0188 (10)0.0320 (12)0.0189 (9)−0.0050 (8)0.0001 (8)0.0042 (8)
C220.0212 (10)0.0300 (12)0.0288 (11)−0.0023 (9)0.0009 (9)0.0075 (9)
C230.0208 (10)0.0233 (11)0.0374 (12)−0.0034 (8)0.0020 (9)−0.0006 (9)
C240.0188 (10)0.0297 (11)0.0247 (10)−0.0044 (9)0.0005 (8)−0.0030 (9)
C250.0161 (9)0.0249 (10)0.0194 (9)−0.0039 (8)0.0019 (7)0.0018 (8)
C260.0177 (9)0.0260 (11)0.0198 (9)−0.0037 (8)0.0010 (8)0.0005 (8)
C270.0194 (10)0.0368 (13)0.0293 (11)0.0021 (9)0.0066 (8)0.0039 (10)
Br1—C11.906 (2)C11—H11A0.9900
O1—C191.210 (2)C11—H11B0.9900
O2—C181.214 (2)C12—C171.388 (3)
O3—C261.209 (2)C12—C131.394 (3)
N1—C91.445 (3)C13—C141.389 (3)
N1—C271.466 (3)C13—H13A0.9500
N1—C81.473 (3)C14—C151.390 (4)
C1—C21.379 (3)C14—H14A0.9500
C1—C61.383 (3)C15—C161.380 (3)
C2—C31.390 (3)C15—H15A0.9500
C2—H2A0.9500C16—C171.396 (3)
C3—C41.395 (3)C16—H16A0.9500
C3—H3A0.9500C17—C181.472 (3)
C4—C51.399 (3)C19—C201.479 (3)
C4—C71.510 (3)C20—C211.392 (3)
C5—C61.390 (3)C20—C251.398 (3)
C5—H5A0.9500C21—C221.380 (3)
C6—H6A0.9500C21—H21A0.9500
C7—C81.546 (3)C22—C231.403 (3)
C7—C101.553 (3)C22—H22A0.9500
C7—H7A1.0000C23—C241.387 (3)
C8—H8A0.9900C23—H23A0.9500
C8—H8B0.9900C24—C251.390 (3)
C9—C191.545 (3)C24—H24A0.9500
C9—C261.553 (3)C25—C261.488 (3)
C9—C101.583 (3)C27—H27A0.9800
C10—C181.544 (3)C27—H27B0.9800
C10—C111.546 (3)C27—H27C0.9800
C11—C121.512 (3)
C9—N1—C27116.69 (17)C17—C12—C13119.36 (19)
C9—N1—C8107.46 (16)C17—C12—C11111.48 (16)
C27—N1—C8114.35 (16)C13—C12—C11129.16 (19)
C2—C1—C6121.85 (19)C14—C13—C12118.4 (2)
C2—C1—Br1118.66 (16)C14—C13—H13A120.8
C6—C1—Br1119.48 (15)C12—C13—H13A120.8
C1—C2—C3118.85 (19)C13—C14—C15121.6 (2)
C1—C2—H2A120.6C13—C14—H14A119.2
C3—C2—H2A120.6C15—C14—H14A119.2
C2—C3—C4121.30 (18)C16—C15—C14120.4 (2)
C2—C3—H3A119.4C16—C15—H15A119.8
C4—C3—H3A119.4C14—C15—H15A119.8
C3—C4—C5118.01 (18)C15—C16—C17117.9 (2)
C3—C4—C7122.69 (18)C15—C16—H16A121.1
C5—C4—C7119.30 (18)C17—C16—H16A121.1
C6—C5—C4121.49 (19)C12—C17—C16122.24 (19)
C6—C5—H5A119.3C12—C17—C18109.19 (17)
C4—C5—H5A119.3C16—C17—C18128.53 (19)
C1—C6—C5118.46 (18)O2—C18—C17127.45 (19)
C1—C6—H6A120.8O2—C18—C10125.27 (18)
C5—C6—H6A120.8C17—C18—C10107.28 (16)
C4—C7—C8115.99 (17)O1—C19—C20126.71 (18)
C4—C7—C10114.55 (15)O1—C19—C9126.11 (19)
C8—C7—C10104.92 (15)C20—C19—C9107.17 (16)
C4—C7—H7A106.9C21—C20—C25120.93 (19)
C8—C7—H7A106.9C21—C20—C19129.02 (18)
C10—C7—H7A106.9C25—C20—C19110.05 (17)
N1—C8—C7105.26 (15)C22—C21—C20118.20 (19)
N1—C8—H8A110.7C22—C21—H21A120.9
C7—C8—H8A110.7C20—C21—H21A120.9
N1—C8—H8B110.7C21—C22—C23120.8 (2)
C7—C8—H8B110.7C21—C22—H22A119.6
H8A—C8—H8B108.8C23—C22—H22A119.6
N1—C9—C19115.00 (16)C24—C23—C22121.3 (2)
N1—C9—C26117.37 (16)C24—C23—H23A119.4
C19—C9—C26101.32 (15)C22—C23—H23A119.4
N1—C9—C10100.95 (15)C23—C24—C25117.79 (19)
C19—C9—C10112.11 (15)C23—C24—H24A121.1
C26—C9—C10110.47 (16)C25—C24—H24A121.1
C18—C10—C11103.44 (15)C24—C25—C20120.99 (19)
C18—C10—C7113.34 (16)C24—C25—C26129.75 (18)
C11—C10—C7118.79 (16)C20—C25—C26109.26 (18)
C18—C10—C9111.89 (15)O3—C26—C25126.98 (19)
C11—C10—C9109.65 (15)O3—C26—C9125.77 (19)
C7—C10—C999.93 (14)C25—C26—C9107.22 (15)
C12—C11—C10103.93 (16)N1—C27—H27A109.5
C12—C11—H11A111.0N1—C27—H27B109.5
C10—C11—H11A111.0H27A—C27—H27B109.5
C12—C11—H11B111.0N1—C27—H27C109.5
C10—C11—H11B111.0H27A—C27—H27C109.5
H11A—C11—H11B109.0H27B—C27—H27C109.5
C6—C1—C2—C3−2.2 (3)C14—C15—C16—C17−1.9 (3)
Br1—C1—C2—C3177.23 (14)C13—C12—C17—C160.6 (3)
C1—C2—C3—C40.5 (3)C11—C12—C17—C16−179.99 (19)
C2—C3—C4—C51.2 (3)C13—C12—C17—C18178.51 (18)
C2—C3—C4—C7−179.53 (18)C11—C12—C17—C18−2.1 (2)
C3—C4—C5—C6−1.2 (3)C15—C16—C17—C121.2 (3)
C7—C4—C5—C6179.50 (17)C15—C16—C17—C18−176.3 (2)
C2—C1—C6—C52.2 (3)C12—C17—C18—O2168.6 (2)
Br1—C1—C6—C5−177.24 (14)C16—C17—C18—O2−13.7 (3)
C4—C5—C6—C1−0.4 (3)C12—C17—C18—C10−11.8 (2)
C3—C4—C7—C840.8 (2)C16—C17—C18—C10165.9 (2)
C5—C4—C7—C8−139.97 (18)C11—C10—C18—O2−160.17 (19)
C3—C4—C7—C10−81.7 (2)C7—C10—C18—O2−30.2 (3)
C5—C4—C7—C1097.5 (2)C9—C10—C18—O281.9 (2)
C9—N1—C8—C7−25.6 (2)C11—C10—C18—C1720.3 (2)
C27—N1—C8—C7−156.81 (17)C7—C10—C18—C17150.23 (16)
C4—C7—C8—N1−131.75 (17)C9—C10—C18—C17−97.69 (18)
C10—C7—C8—N1−4.3 (2)N1—C9—C19—O1−29.7 (3)
C27—N1—C9—C19−65.1 (2)C26—C9—C19—O1−157.37 (19)
C8—N1—C9—C19164.97 (16)C10—C9—C19—O184.8 (2)
C27—N1—C9—C2653.9 (2)N1—C9—C19—C20149.06 (16)
C8—N1—C9—C26−76.0 (2)C26—C9—C19—C2021.41 (19)
C27—N1—C9—C10174.03 (16)C10—C9—C19—C20−96.38 (18)
C8—N1—C9—C1044.09 (18)O1—C19—C20—C21−16.3 (3)
C4—C7—C10—C18−83.5 (2)C9—C19—C20—C21164.93 (19)
C8—C7—C10—C18148.17 (16)O1—C19—C20—C25163.7 (2)
C4—C7—C10—C1138.2 (2)C9—C19—C20—C25−15.0 (2)
C8—C7—C10—C11−90.1 (2)C25—C20—C21—C22−0.1 (3)
C4—C7—C10—C9157.30 (16)C19—C20—C21—C22180.0 (2)
C8—C7—C10—C928.97 (18)C20—C21—C22—C23−1.0 (3)
N1—C9—C10—C18−164.44 (15)C21—C22—C23—C241.1 (3)
C19—C9—C10—C1872.7 (2)C22—C23—C24—C25−0.1 (3)
C26—C9—C10—C18−39.5 (2)C23—C24—C25—C20−1.0 (3)
N1—C9—C10—C1181.38 (17)C23—C24—C25—C26178.8 (2)
C19—C9—C10—C11−41.5 (2)C21—C20—C25—C241.1 (3)
C26—C9—C10—C11−153.72 (15)C19—C20—C25—C24−178.89 (18)
N1—C9—C10—C7−44.19 (17)C21—C20—C25—C26−178.72 (18)
C19—C9—C10—C7−167.09 (16)C19—C20—C25—C261.3 (2)
C26—C9—C10—C780.71 (17)C24—C25—C26—O314.7 (4)
C18—C10—C11—C12−20.64 (19)C20—C25—C26—O3−165.4 (2)
C7—C10—C11—C12−147.24 (17)C24—C25—C26—C9−166.9 (2)
C9—C10—C11—C1298.86 (17)C20—C25—C26—C913.0 (2)
C10—C11—C12—C1714.9 (2)N1—C9—C26—O331.6 (3)
C10—C11—C12—C13−165.8 (2)C19—C9—C26—O3157.7 (2)
C17—C12—C13—C14−1.7 (3)C10—C9—C26—O3−83.3 (2)
C11—C12—C13—C14179.1 (2)N1—C9—C26—C25−146.80 (17)
C12—C13—C14—C150.9 (3)C19—C9—C26—C25−20.7 (2)
C13—C14—C15—C160.9 (3)C10—C9—C26—C2598.26 (18)
D—H···AD—HH···AD···AD—H···A
C11—H11B···O10.992.403.053 (2)123
C15—H15A···O2i0.952.443.163 (3)133
C22—H22A···O3i0.952.573.225 (3)126
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11B⋯O10.992.403.053 (2)123
C15—H15A⋯O2i0.952.443.163 (3)133
C22—H22A⋯O3i0.952.573.225 (3)126

Symmetry code: (i) .

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Authors:  Amit R Trivedi; Vimal R Bhuva; Bipin H Dholariya; Dipti K Dodiya; Vipul B Kataria; Viresh H Shah
Journal:  Bioorg Med Chem Lett       Date:  2010-08-14       Impact factor: 2.823

2.  A facile 1,3-dipolar cycloaddition of azomethine ylides to 2-arylidene-1,3-indanediones: synthesis of dispiro-oxindolylpyrrolothiazoles and their antimycobacterial evaluation.

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Prem M S Chauhan; Naresh Sunduru; Moni Sharma
Journal:  Future Med Chem       Date:  2010-09       Impact factor: 3.808

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Authors:  Raju Ranjith Kumar; Subbu Perumal; Palaniappan Senthilkumar; Perumal Yogeeswari; Dharmarajan Sriram
Journal:  Eur J Med Chem       Date:  2009-05-21       Impact factor: 6.514

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Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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Authors:  Ang Chee Wei; Mohamed Ashraf Ali; Tan Soo Choon; Madhukar Hemamalini; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

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