| Literature DB >> 22220114 |
Abstract
The asymmetric unit of the title compound, C(9)H(10)N(4), consists of two mol-ecules in which the dihedral angles between the planes of the imidazole and pyrimidine rings are 4.8 (1) and 2.1 (1)°.Entities:
Year: 2011 PMID: 22220114 PMCID: PMC3247496 DOI: 10.1107/S1600536811044357
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H10N4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3786 reflections |
| θ = 2.7–25.4° | |
| µ = 0.09 mm−1 | |
| β = 91.259 (5)° | Needle, white |
| 0.20 × 0.10 × 0.10 mm | |
| Bruker SMART diffractometer | 2365 reflections with |
| Radiation source: sealed tube | |
| graphite | θmax = 25.0°, θmin = 1.5° |
| ω scans | |
| 11971 measured reflections | |
| 3091 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3091 reflections | Δρmax = 0.25 e Å−3 |
| 240 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.008 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N7 | 0.3875 (2) | 0.45208 (8) | 0.7788 (3) | 0.0472 (6) | |
| N2 | 0.1912 (2) | 0.21267 (8) | 0.6762 (3) | 0.0493 (6) | |
| N4 | −0.0469 (2) | 0.22566 (9) | 0.5881 (3) | 0.0483 (6) | |
| N8 | 0.5461 (2) | 0.52131 (8) | 0.7336 (3) | 0.0461 (6) | |
| N6 | 0.3095 (2) | 0.53376 (8) | 0.8162 (3) | 0.0465 (6) | |
| C13 | 0.4215 (3) | 0.50025 (10) | 0.7736 (4) | 0.0420 (6) | |
| C14 | 0.4946 (3) | 0.42061 (10) | 0.7404 (4) | 0.0471 (7) | |
| N3 | 0.1114 (2) | 0.29410 (9) | 0.6535 (3) | 0.0513 (6) | |
| C15 | 0.6291 (3) | 0.43849 (11) | 0.6982 (4) | 0.0517 (7) | |
| H15 | 0.7034 | 0.4164 | 0.6727 | 0.062* | |
| C4 | 0.0780 (3) | 0.24630 (10) | 0.6363 (4) | 0.0453 (7) | |
| N5 | 0.0973 (3) | 0.56080 (10) | 0.9067 (4) | 0.0649 (8) | |
| C5 | 0.0032 (3) | 0.32600 (11) | 0.6131 (4) | 0.0539 (8) | |
| C16 | 0.6525 (3) | 0.48921 (11) | 0.6942 (4) | 0.0474 (7) | |
| C7 | −0.1541 (3) | 0.25785 (11) | 0.5495 (4) | 0.0494 (7) | |
| C6 | −0.1306 (3) | 0.30860 (11) | 0.5581 (4) | 0.0550 (8) | |
| H6 | −0.2041 | 0.3309 | 0.5271 | 0.066* | |
| C10 | 0.1743 (3) | 0.52165 (12) | 0.8750 (4) | 0.0552 (8) | |
| H10 | 0.1420 | 0.4890 | 0.8903 | 0.066* | |
| N1 | 0.4063 (3) | 0.18529 (10) | 0.7662 (5) | 0.0728 (9) | |
| C11 | 0.3144 (3) | 0.58522 (11) | 0.8102 (4) | 0.0548 (8) | |
| H11 | 0.3914 | 0.6051 | 0.7755 | 0.066* | |
| C9 | −0.2980 (3) | 0.23589 (13) | 0.4997 (5) | 0.0647 (9) | |
| H9A | −0.2873 | 0.2114 | 0.4027 | 0.097* | |
| H9B | −0.3615 | 0.2619 | 0.4560 | 0.097* | |
| H9C | −0.3373 | 0.2203 | 0.6086 | 0.097* | |
| C3 | 0.3271 (3) | 0.22439 (12) | 0.7368 (5) | 0.0622 (9) | |
| H3 | 0.3593 | 0.2570 | 0.7551 | 0.075* | |
| C18 | 0.7944 (3) | 0.51142 (13) | 0.6463 (5) | 0.0625 (9) | |
| H18A | 0.7812 | 0.5352 | 0.5464 | 0.094* | |
| H18B | 0.8582 | 0.4854 | 0.6070 | 0.094* | |
| H18C | 0.8351 | 0.5279 | 0.7546 | 0.094* | |
| C17 | 0.4608 (4) | 0.36581 (11) | 0.7441 (5) | 0.0664 (9) | |
| H17A | 0.3708 | 0.3607 | 0.8044 | 0.100* | |
| H17B | 0.5356 | 0.3484 | 0.8123 | 0.100* | |
| H17C | 0.4545 | 0.3533 | 0.6180 | 0.100* | |
| C1 | 0.1867 (3) | 0.16122 (11) | 0.6687 (5) | 0.0629 (9) | |
| H1 | 0.1088 | 0.1413 | 0.6328 | 0.076* | |
| C12 | 0.1844 (3) | 0.60062 (12) | 0.8651 (5) | 0.0647 (9) | |
| H12 | 0.1569 | 0.6339 | 0.8738 | 0.078* | |
| C8 | 0.0358 (4) | 0.38062 (12) | 0.6319 (6) | 0.0768 (11) | |
| H8A | 0.0052 | 0.3923 | 0.7520 | 0.115* | |
| H8B | −0.0143 | 0.3987 | 0.5344 | 0.115* | |
| H8C | 0.1374 | 0.3859 | 0.6214 | 0.115* | |
| C2 | 0.3180 (3) | 0.14584 (13) | 0.7239 (6) | 0.0734 (10) | |
| H2 | 0.3456 | 0.1125 | 0.7323 | 0.088* |
| N7 | 0.0400 (13) | 0.0420 (13) | 0.0596 (14) | −0.0005 (10) | −0.0030 (10) | −0.0009 (10) |
| N2 | 0.0380 (13) | 0.0443 (14) | 0.0659 (15) | −0.0011 (10) | 0.0068 (11) | 0.0059 (11) |
| N4 | 0.0401 (13) | 0.0492 (14) | 0.0559 (14) | −0.0035 (10) | 0.0065 (10) | 0.0015 (10) |
| N8 | 0.0342 (12) | 0.0457 (14) | 0.0583 (14) | −0.0013 (10) | −0.0026 (10) | −0.0007 (10) |
| N6 | 0.0354 (12) | 0.0439 (13) | 0.0601 (14) | 0.0023 (10) | −0.0018 (10) | −0.0037 (10) |
| C13 | 0.0358 (14) | 0.0414 (15) | 0.0485 (15) | 0.0028 (11) | −0.0041 (11) | −0.0017 (11) |
| C14 | 0.0433 (15) | 0.0424 (15) | 0.0553 (16) | 0.0035 (12) | −0.0057 (12) | −0.0024 (12) |
| N3 | 0.0425 (13) | 0.0436 (14) | 0.0681 (15) | −0.0002 (11) | 0.0125 (11) | 0.0031 (11) |
| C15 | 0.0395 (15) | 0.0509 (18) | 0.0645 (18) | 0.0094 (13) | −0.0011 (13) | −0.0025 (13) |
| C4 | 0.0387 (15) | 0.0454 (16) | 0.0522 (16) | 0.0021 (12) | 0.0109 (12) | 0.0040 (12) |
| N5 | 0.0360 (13) | 0.0625 (17) | 0.096 (2) | 0.0053 (12) | 0.0027 (13) | −0.0125 (14) |
| C5 | 0.0479 (17) | 0.0472 (17) | 0.0672 (18) | 0.0042 (13) | 0.0165 (14) | 0.0047 (13) |
| C16 | 0.0366 (14) | 0.0505 (17) | 0.0548 (17) | 0.0018 (12) | −0.0038 (12) | 0.0009 (12) |
| C7 | 0.0404 (15) | 0.0578 (18) | 0.0504 (16) | 0.0026 (13) | 0.0092 (12) | 0.0050 (13) |
| C6 | 0.0411 (16) | 0.0547 (19) | 0.0694 (19) | 0.0047 (13) | 0.0094 (14) | 0.0074 (14) |
| C10 | 0.0357 (15) | 0.0547 (18) | 0.075 (2) | −0.0004 (13) | 0.0035 (13) | −0.0041 (14) |
| N1 | 0.0422 (15) | 0.0608 (18) | 0.115 (2) | 0.0029 (13) | 0.0018 (15) | 0.0157 (16) |
| C11 | 0.0427 (16) | 0.0431 (16) | 0.078 (2) | 0.0040 (13) | 0.0000 (14) | −0.0005 (14) |
| C9 | 0.0428 (17) | 0.081 (2) | 0.071 (2) | −0.0022 (16) | 0.0011 (14) | −0.0004 (17) |
| C3 | 0.0402 (17) | 0.0538 (19) | 0.093 (2) | −0.0027 (14) | −0.0002 (15) | 0.0081 (16) |
| C18 | 0.0376 (16) | 0.064 (2) | 0.086 (2) | 0.0005 (14) | 0.0039 (15) | 0.0028 (16) |
| C17 | 0.0557 (19) | 0.0439 (18) | 0.100 (2) | −0.0009 (15) | 0.0019 (17) | −0.0026 (16) |
| C1 | 0.0459 (17) | 0.0442 (17) | 0.099 (2) | −0.0030 (14) | 0.0063 (16) | 0.0055 (16) |
| C12 | 0.0490 (18) | 0.0501 (19) | 0.095 (2) | 0.0104 (15) | −0.0030 (16) | −0.0094 (16) |
| C8 | 0.060 (2) | 0.0479 (19) | 0.124 (3) | 0.0022 (16) | 0.015 (2) | 0.0013 (19) |
| C2 | 0.0458 (18) | 0.0491 (19) | 0.126 (3) | 0.0060 (15) | 0.0120 (18) | 0.0158 (19) |
| N7—C13 | 1.328 (3) | C7—C9 | 1.497 (4) |
| N7—C14 | 1.337 (4) | C6—H6 | 0.9300 |
| N2—C3 | 1.363 (4) | C10—H10 | 0.9300 |
| N2—C1 | 1.378 (4) | N1—C3 | 1.294 (4) |
| N2—C4 | 1.410 (4) | N1—C2 | 1.367 (4) |
| N4—C4 | 1.325 (4) | C11—C12 | 1.344 (4) |
| N4—C7 | 1.342 (4) | C11—H11 | 0.9300 |
| N8—C13 | 1.326 (3) | C9—H9A | 0.9600 |
| N8—C16 | 1.345 (3) | C9—H9B | 0.9600 |
| N6—C10 | 1.373 (4) | C9—H9C | 0.9600 |
| N6—C11 | 1.379 (4) | C3—H3 | 0.9300 |
| N6—C13 | 1.413 (3) | C18—H18A | 0.9600 |
| C14—C15 | 1.379 (4) | C18—H18B | 0.9600 |
| C14—C17 | 1.500 (4) | C18—H18C | 0.9600 |
| N3—C4 | 1.321 (4) | C17—H17A | 0.9600 |
| N3—C5 | 1.347 (4) | C17—H17B | 0.9600 |
| C15—C16 | 1.375 (4) | C17—H17C | 0.9600 |
| C15—H15 | 0.9300 | C1—C2 | 1.340 (5) |
| N5—C10 | 1.292 (4) | C1—H1 | 0.9300 |
| N5—C12 | 1.375 (4) | C12—H12 | 0.9300 |
| C5—C6 | 1.378 (4) | C8—H8A | 0.9600 |
| C5—C8 | 1.498 (4) | C8—H8B | 0.9600 |
| C16—C18 | 1.495 (4) | C8—H8C | 0.9600 |
| C7—C6 | 1.377 (4) | C2—H2 | 0.9300 |
| C13—N7—C14 | 115.3 (2) | C12—C11—N6 | 105.5 (3) |
| C3—N2—C1 | 105.6 (2) | C12—C11—H11 | 127.3 |
| C3—N2—C4 | 126.9 (3) | N6—C11—H11 | 127.3 |
| C1—N2—C4 | 127.4 (2) | C7—C9—H9A | 109.5 |
| C4—N4—C7 | 115.4 (2) | C7—C9—H9B | 109.5 |
| C13—N8—C16 | 115.1 (2) | H9A—C9—H9B | 109.5 |
| C10—N6—C11 | 106.0 (2) | C7—C9—H9C | 109.5 |
| C10—N6—C13 | 126.9 (2) | H9A—C9—H9C | 109.5 |
| C11—N6—C13 | 127.0 (2) | H9B—C9—H9C | 109.5 |
| N8—C13—N7 | 128.9 (2) | N1—C3—N2 | 112.7 (3) |
| N8—C13—N6 | 115.4 (2) | N1—C3—H3 | 123.6 |
| N7—C13—N6 | 115.6 (2) | N2—C3—H3 | 123.6 |
| N7—C14—C15 | 120.7 (3) | C16—C18—H18A | 109.5 |
| N7—C14—C17 | 117.0 (3) | C16—C18—H18B | 109.5 |
| C15—C14—C17 | 122.3 (3) | H18A—C18—H18B | 109.5 |
| C4—N3—C5 | 114.8 (3) | C16—C18—H18C | 109.5 |
| C16—C15—C14 | 119.5 (3) | H18A—C18—H18C | 109.5 |
| C16—C15—H15 | 120.3 | H18B—C18—H18C | 109.5 |
| C14—C15—H15 | 120.3 | C14—C17—H17A | 109.5 |
| N3—C4—N4 | 129.1 (3) | C14—C17—H17B | 109.5 |
| N3—C4—N2 | 115.2 (2) | H17A—C17—H17B | 109.5 |
| N4—C4—N2 | 115.7 (2) | C14—C17—H17C | 109.5 |
| C10—N5—C12 | 105.0 (3) | H17A—C17—H17C | 109.5 |
| N3—C5—C6 | 120.9 (3) | H17B—C17—H17C | 109.5 |
| N3—C5—C8 | 116.8 (3) | C2—C1—N2 | 105.5 (3) |
| C6—C5—C8 | 122.4 (3) | C2—C1—H1 | 127.2 |
| N8—C16—C15 | 120.6 (2) | N2—C1—H1 | 127.2 |
| N8—C16—C18 | 116.9 (2) | C11—C12—N5 | 111.3 (3) |
| C15—C16—C18 | 122.6 (3) | C11—C12—H12 | 124.3 |
| N4—C7—C6 | 120.5 (3) | N5—C12—H12 | 124.3 |
| N4—C7—C9 | 116.9 (3) | C5—C8—H8A | 109.5 |
| C6—C7—C9 | 122.6 (3) | C5—C8—H8B | 109.5 |
| C7—C6—C5 | 119.2 (3) | H8A—C8—H8B | 109.5 |
| C7—C6—H6 | 120.4 | C5—C8—H8C | 109.5 |
| C5—C6—H6 | 120.4 | H8A—C8—H8C | 109.5 |
| N5—C10—N6 | 112.2 (3) | H8B—C8—H8C | 109.5 |
| N5—C10—H10 | 123.9 | C1—C2—N1 | 111.6 (3) |
| N6—C10—H10 | 123.9 | C1—C2—H2 | 124.2 |
| C3—N1—C2 | 104.5 (3) | N1—C2—H2 | 124.2 |
| C16—N8—C13—N7 | −0.5 (4) | C13—N8—C16—C18 | 179.4 (3) |
| C16—N8—C13—N6 | 179.7 (2) | C14—C15—C16—N8 | 0.9 (4) |
| C14—N7—C13—N8 | 0.9 (4) | C14—C15—C16—C18 | −178.9 (3) |
| C14—N7—C13—N6 | −179.3 (2) | C4—N4—C7—C6 | 1.0 (4) |
| C10—N6—C13—N8 | −175.0 (3) | C4—N4—C7—C9 | −178.3 (2) |
| C11—N6—C13—N8 | 3.8 (4) | N4—C7—C6—C5 | −2.2 (4) |
| C10—N6—C13—N7 | 5.2 (4) | C9—C7—C6—C5 | 177.1 (3) |
| C11—N6—C13—N7 | −176.0 (3) | N3—C5—C6—C7 | 1.7 (4) |
| C13—N7—C14—C15 | −0.3 (4) | C8—C5—C6—C7 | −178.0 (3) |
| C13—N7—C14—C17 | −179.9 (3) | C12—N5—C10—N6 | 0.7 (4) |
| N7—C14—C15—C16 | −0.6 (4) | C11—N6—C10—N5 | −0.5 (4) |
| C17—C14—C15—C16 | 179.0 (3) | C13—N6—C10—N5 | 178.5 (3) |
| C5—N3—C4—N4 | −1.2 (4) | C10—N6—C11—C12 | 0.1 (3) |
| C5—N3—C4—N2 | 179.3 (2) | C13—N6—C11—C12 | −178.9 (3) |
| C7—N4—C4—N3 | 0.8 (4) | C2—N1—C3—N2 | −0.3 (4) |
| C7—N4—C4—N2 | −179.7 (2) | C1—N2—C3—N1 | 0.3 (4) |
| C3—N2—C4—N3 | 2.8 (4) | C4—N2—C3—N1 | 178.3 (3) |
| C1—N2—C4—N3 | −179.7 (3) | C3—N2—C1—C2 | −0.2 (4) |
| C3—N2—C4—N4 | −176.8 (3) | C4—N2—C1—C2 | −178.1 (3) |
| C1—N2—C4—N4 | 0.8 (4) | N6—C11—C12—N5 | 0.3 (4) |
| C4—N3—C5—C6 | −0.1 (4) | C10—N5—C12—C11 | −0.6 (4) |
| C4—N3—C5—C8 | 179.6 (3) | N2—C1—C2—N1 | 0.0 (4) |
| C13—N8—C16—C15 | −0.4 (4) | C3—N1—C2—C1 | 0.2 (4) |