Literature DB >> 22220061

1,3-Benzothia-zole-2(3H)-selone.

Gunay Z Mammadova, Zhanna V Matsulevich, Vladimir K Osmanov, Alexander V Borisov, Victor N Khrustalev.   

Abstract

The title compound, C(7)H(5)NSSe, is the product of the reaction of 2-chloro-benzothia-zole with sodium hydro-selenide. The mol-ecule is almost planar (r.m.s. deviation = 0.018 Å) owing to the presence of the long chain of conjugated bonds (Se=C-N-C=C-C=C-C=C). The geometrical parameters correspond well to those of the analog N-methyl-benzothia-zole-2(3H)-selone, demonstrating that the S atom does not take a significant role in the electron delocalization within the mol-ecule. In the crystal, mol-ecules form centrosymmetric dimers by means of inter-molecular N-H⋯Se hydrogen bonds. The dimers have a nonplanar ladder-like structure. Furthermore, the dimers are linked into ribbons propagating in [010] by weak attractive Se⋯S [3.7593 (4) Å] inter-actions.

Entities:  

Year:  2011        PMID: 22220061      PMCID: PMC3247443          DOI: 10.1107/S1600536811043339

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For selones as potential anti­thyroid drugs, see: Taurog et al. (1994 ▶); Roy & Mugesh (2005 ▶, 2006 ▶); Roy et al. (2007 ▶, 2011 ▶). For 2,3-dihydro-1,3-benzothia­zolo-2-selone synthesis, see: Warner (1963 ▶); Shibata & Mitsunobu (1992 ▶). For related compounds, see: Guziec & Guziec (1994 ▶); Husebye et al. (1997 ▶); Landry et al. (2006 ▶); Nakanishi et al. (2008 ▶).

Experimental

Crystal data

C7H5NSSe M = 214.15 Monoclinic, a = 8.0420 (4) Å b = 6.0818 (3) Å c = 15.1836 (7) Å β = 101.195 (1)° V = 728.50 (6) Å3 Z = 4 Mo Kα radiation μ = 5.35 mm−1 T = 100 K 0.30 × 0.21 × 0.18 mm

Data collection

Bruker SMART 1K CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1998 ▶) T min = 0.297, T max = 0.446 8129 measured reflections 2108 independent reflections 2042 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.016 wR(F 2) = 0.041 S = 1.00 2108 reflections 91 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811043339/rk2309sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811043339/rk2309Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811043339/rk2309Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H5NSSeF(000) = 416
Mr = 214.15Dx = 1.952 Mg m3
Monoclinic, P21/nMelting point = 346–347 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 8.0420 (4) ÅCell parameters from 6338 reflections
b = 6.0818 (3) Åθ = 2.6–30.0°
c = 15.1836 (7) ŵ = 5.35 mm1
β = 101.195 (1)°T = 100 K
V = 728.50 (6) Å3Prism, pale-yellow
Z = 40.30 × 0.21 × 0.18 mm
Bruker SMART 1K CCD diffractometer2108 independent reflections
Radiation source: fine-focus sealed tube2042 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 30.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1998)h = −11→11
Tmin = 0.297, Tmax = 0.446k = −8→8
8129 measured reflectionsl = −20→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.016Hydrogen site location: difference Fourier map
wR(F2) = 0.041H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.023P)2 + 0.371P] where P = (Fo2 + 2Fc2)/3
2108 reflections(Δ/σ)max = 0.001
91 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σF2 is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Se11.277060 (14)0.076249 (19)0.579287 (8)0.01478 (5)
S11.17970 (3)0.51668 (5)0.661496 (19)0.01522 (6)
C21.12217 (14)0.27701 (18)0.60187 (7)0.01301 (19)
N30.95281 (12)0.26504 (16)0.57732 (6)0.01391 (18)
H30.90220.15430.54570.017*
C3A0.86204 (14)0.43853 (18)0.60496 (8)0.0126 (2)
C40.68634 (15)0.4594 (2)0.59126 (8)0.0155 (2)
H40.61350.35000.56010.019*
C50.62189 (15)0.6465 (2)0.62499 (8)0.0170 (2)
H50.50260.66590.61600.020*
C60.72815 (15)0.8072 (2)0.67190 (8)0.0167 (2)
H60.68010.93350.69400.020*
C70.90347 (15)0.7839 (2)0.68649 (8)0.0160 (2)
H70.97620.89230.71850.019*
C7A0.96916 (14)0.59737 (19)0.65275 (8)0.0133 (2)
U11U22U33U12U13U23
Se10.01251 (7)0.01418 (7)0.01708 (7)0.00142 (4)0.00145 (4)−0.00172 (4)
S10.01046 (12)0.01552 (13)0.01887 (13)−0.00113 (9)0.00088 (10)−0.00449 (10)
C20.0133 (5)0.0130 (5)0.0125 (5)0.0000 (4)0.0020 (4)0.0006 (4)
N30.0125 (4)0.0132 (4)0.0155 (4)−0.0010 (3)0.0015 (3)−0.0021 (3)
C3A0.0121 (5)0.0134 (5)0.0123 (5)−0.0008 (4)0.0022 (4)0.0001 (4)
C40.0124 (5)0.0177 (5)0.0158 (5)−0.0016 (4)0.0013 (4)0.0001 (4)
C50.0128 (5)0.0219 (6)0.0168 (5)0.0018 (4)0.0040 (4)0.0019 (4)
C60.0172 (5)0.0179 (5)0.0159 (5)0.0032 (4)0.0052 (4)0.0001 (4)
C70.0160 (5)0.0163 (5)0.0154 (5)0.0000 (4)0.0024 (4)−0.0026 (4)
C7A0.0114 (5)0.0149 (5)0.0134 (5)−0.0012 (4)0.0021 (4)−0.0009 (4)
Se1—C21.8236 (11)C4—C51.3890 (17)
S1—C21.7308 (12)C4—H40.9500
S1—C7A1.7430 (12)C5—C61.3986 (17)
C2—N31.3425 (14)C5—H50.9500
N3—C3A1.3933 (14)C6—C71.3913 (16)
N3—H30.8800C6—H60.9500
C3A—C41.3935 (16)C7—C7A1.3906 (16)
C3A—C7A1.3997 (15)C7—H70.9500
C2—S1—C7A92.31 (5)C4—C5—C6121.69 (11)
N3—C2—S1110.16 (8)C4—C5—H5119.2
N3—C2—Se1127.21 (9)C6—C5—H5119.2
S1—C2—Se1122.63 (6)C7—C6—C5120.67 (11)
C2—N3—C3A115.97 (10)C7—C6—H6119.7
C2—N3—H3122.0C5—C6—H6119.7
C3A—N3—H3122.0C7A—C7—C6118.04 (11)
N3—C3A—C4126.82 (10)C7A—C7—H7121.0
N3—C3A—C7A111.91 (10)C6—C7—H7121.0
C4—C3A—C7A121.25 (10)C7—C7A—C3A120.96 (11)
C5—C4—C3A117.37 (11)C7—C7A—S1129.39 (9)
C5—C4—H4121.3C3A—C7A—S1109.64 (8)
C3A—C4—H4121.3
C7A—S1—C2—N30.42 (9)C5—C6—C7—C7A0.29 (18)
C7A—S1—C2—Se1−179.05 (7)C6—C7—C7A—C3A0.46 (17)
S1—C2—N3—C3A−1.00 (13)C6—C7—C7A—S1−178.39 (9)
Se1—C2—N3—C3A178.44 (8)N3—C3A—C7A—C7−179.85 (10)
C2—N3—C3A—C4−177.14 (11)C4—C3A—C7A—C7−1.41 (17)
C2—N3—C3A—C7A1.19 (14)N3—C3A—C7A—S1−0.80 (12)
N3—C3A—C4—C5179.72 (11)C4—C3A—C7A—S1177.64 (9)
C7A—C3A—C4—C51.53 (17)C2—S1—C7A—C7179.17 (12)
C3A—C4—C5—C6−0.77 (18)C2—S1—C7A—C3A0.22 (9)
C4—C5—C6—C7−0.13 (18)
D—H···AD—HH···AD···AD—H···A
N3—H3···Se1i0.882.563.4165 (10)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3⋯Se1i0.882.563.4165 (10)163

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Anti-thyroid drugs and thyroid hormone synthesis: effect of methimazole derivatives on peroxidase-catalyzed reactions.

Authors:  Gouriprasanna Roy; G Mugesh
Journal:  J Am Chem Soc       Date:  2005-11-02       Impact factor: 15.419

3.  Synthesis and structural characterization of 1-mesityl-1,3-dihydro-imidazole-2-selone and bis(1-mesitylimidazol-2-yl)diselenide: experimental evidence that the selone is more stable than the selenol tautomer.

Authors:  Victoria K Landry; Mao Minoura; Keliang Pang; Daniela Buccella; Bryte V Kelly; Gerard Parkin
Journal:  J Am Chem Soc       Date:  2006-09-27       Impact factor: 15.419

4.  The selenium analog of methimazole. Measurement of its inhibitory effect on type I 5'-deiodinase and of its antithyroid activity.

Authors:  A Taurog; M L Dorris; L J Guziec; F S Guziec
Journal:  Biochem Pharmacol       Date:  1994-10-07       Impact factor: 5.858

  4 in total
  1 in total

1.  1-Methyl-2,3-dihydro-1H-benzimidazole-2-selone.

Authors:  Gunay Z Mammadova; Zhanna V Matsulevich; Vladimir K Osmanov; Alexander V Borisov; Victor N Khrustalev
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-13
  1 in total

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